Tan0006018 (gene) Snake gourd v1

Overview


Name	Tan0006018
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	LG06: 4007297 .. 4010864 (+)
RNA-Seq Expression	Tan0006018
Synteny	Tan0006018

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTCTTCGCGTGCTATTCATCTTCACGCCGTCTTCTCGTCCGTTTTCAGCAGCTCATTGTCGCCGGCGCTCTCTCCGTTCAGTGCTGCAGCCGCCGTCTTCCTTTCGCTCGTGCCGCCGTAGCGTCCGTCCTAGCCGGTTTAGTTTGCACTGACTTTCTACTCTCTTGCTTTTACTGGTATTCTCCCGATTCCATAAAAAACACGCATTAGGACTTGTCTAATGAAAGAATGGAGTTTTTTTAAAAATATATATATATTAACAATAGCTGAATAGCAACGAAAAAGAACTCAAAGAAAATTGGGAATTTCGAACTGCTTTATGCTTACCCTCTGCCTTGTGATTTGTTGCATATGTCTGCCAATTGAGGCTGTGATCATCCGTATATCTCTTTGGTCTCTGCTGAAAATTATTTCATTTCTGCAACCATGAATCTTCCAGCATCTCTCTAAGTAGTCTACATATTATCCAATTCTCTTTTAATCTCTAGCTCGTAGGAGTTTTTTTGATCGACCGAGCAACATCAACTGTTCTTATATTTGTAGGTTTGTAGATTATAGTTGTGGAGAAGACAATGAGTCTATTTTTTAACATTGAAAATCTCTTCCTCATTAACCAATACAATAACCTATGATACATTGAACTTGTTCAGTCTAAAATAGACATAGTGGAGGGCTTAAAGGAGACTTGAAGATTCTCTCCTTTTAGACACTTTTATGTATAGTATGGATGAGTTTGGAAAATAAGTTATTTTGAGTGAAACGCCTAACCAAAATTTTTAAAAAATAGCTTTTTAAATGTTTAACCAGGAATCTCCCAAAATTTCATGATAGAACTAAGAAGCCCAATAAATTTTGTTGAAGTCTGAAATATTATCTAATTATTTTCAAGTTAGTTATTTTCCAATCTTTGAAGTTCCTGGCAAATCTCTGTTGTTAGTGAGCTACTGGGAAGTTTTTTACTCTTGAGAAGAACACTATCCAACAACTCAAGGAGTTTATGGACATATTTAAACACGTAGACATGTTGCTTAGATCTTATTTAATGAGTTCATTGTATTTCATTTTGAACACTAGGAACTAATTAATTAAGTCACTCATTTTGAACTTAATTAGTTCATAGTGTTTCATAATCCTTTATGGTAATTTGATATTAGCAGAAGCATTTCGGATGTAGAATTAACCAAACAAAGTATTTAAATTCTAAACCGTTTTTATAAAAGATGTTTTAGAAAAAATGCATTTTTGAAAAACTCTTAAACTAAAAGGTAATCCAAATGACCTTAAGTGGGCAATTTTGCTCGATCGGCTTGCTATTTTGTGTTCTTCAAATAAACGGCTGAGATCGTTGCAGTTTGTGAACTTTGAGTTGAAAATGGTCTTTTTCTATAATTTCTTGATCGTTTTCCTTTGAAAAGTATTTATGAAGCACGAAGAAATCACTACGAACAGAGTTCTTAACTGTAACATTACCGGCACTAGGCACTAGAACTGTGCTTTTTCTCTGTACTAGATAGTTTTGGATTCCTTAAAATTTTTGTGTAGGTATTCTTCTACTGTTTTTTTTCCCTCTTGCAATTATATTTCGCGTAGTATAATTCTGAATTTTATCGACTCTTTTCTGTTGGGAATGCTTTCAGTTGGCTCGGTTCTCATCCTTTTTGAAGTTGCATCAAAGAAACAACAAAAACAGTGAAGCCAAGGAGAGCAATACAATGTTTTTGTTCTTCCGCTCGTGCTCAGGACCTCTCCATCAGTCCCAACAGCAGCACCTTGTGTTTCAAATACACCTTCGAACGTATGTAGACGACACAATTAAATGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAACCTTCTGCCAGTGATGAACATAAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTTCCAGTTTCCATCATAACTCAGAAGAAGGAAATTCTAAGAATTCCAATGCGTCCCATTGATTTGATCAGAAAATATCCCTGTATTTTTGAAGAATTTCTCCCCGGAGGGATTGGTATTCAACCTCATGTCCGGCTAACGTCTAAAGTCCTTGAGCTTGATGCTGAAGAGCAGTTAACGTATCAAGGTGAGATTTGTAGACAACAAGCTGCAGATCGACTTGTGAAGCTCTTAATGCTATCAAGAGTCCATAAAATACCTTTAAGTATCATTGATCAATTGAAATGGGACCTGGGTCTTCCTACAGATTACGTTGAAAGTATTGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACACAGAAATTTTGCATCTGGATCAGGAGATATGCGAGCGTTGGAATTGGTGTGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAAGATGGCTGCAAAAGTAAAACCCGACAGTTCGATGGTAACAACTAATACTTTTCCTATGAAATTCTCGAATGGGTTTGTGATGGACAAGAAGTTCAAGAAGTGTGTGGATGAATGGCAAAACCTACCTTACATTTCTCCATACGAAAATGCATCACATCTCTCCCCGAATAGCGATGAATCTGATAAGTGGACTGCTGCGATTTTACACGAGCTTCTTCATATGTTTGTTACGAAGAAGACTGAGAAGGAAAATATATTGTGCATAGGTGAGTACTTTGGTCTTCGGTCAAGGTTTAAGAGAGCATTGCTTCATCATCCAGGGATATTCTACCTATCAAGTAAGGCTGGAACCTACACAGTTGTCTTAAAAGAAGGGTATAAAAGGGGTTCCGTAATTCAGAGTAGCCCCTTGATGAACATTAGAAACAAGTACCTTCACATTATGAACACAGTGAAGGAAGACAGTAAAACAATAAGTGAGCATAGCGGTACTCGTCAACAGAAGCAAGAACAGAAAGAAGGGTCAGATGATGTATCTGGGAAAAAAAATGAAGCTGAATTATTCGACTCCTCAGATGATGAAGATGAAGACGCTAGTAGTAACCGTAATGTTCGTGCGGATCAAAAAGAGGATGGACGGAAGAGACATGTAGATTTCAAAGAAAATGTTGCTAGAAACAGGATGAGATCATCAAAAAGAATGAACTCGACTATACGAAGACCTTCTAGGGATGTTAAAAGCGAGAGGTCAAATAAGACTAAGAGATACCCGGTGAGGACGAAGGTTTAACATAGTTTTGCTTGACTAATAGACATTAAATATCACAAGGAAGGGATAATGAAACCTCTGATATGAAAAGAATCGAAGTTTACTTGAGGCTTTGATTCCTGCATTGGAATGTGAAAGTTCCTTTAACTGGCCTTACTTATTTATTCTGTAGGATAAGTTTCTTTTAGTGCCATAATCCCTTTCATGACAAGTCAATATCCAAAGCCGTTTTTGATTTGGAAGGAGAGAAGTGAAGCTTTCTGATGTGGTGGTACAAGATAGCTAGTTATTTGTCTGTTGTATCTGTCAGGATAGAGCATTACTGCTCGGAATTGTTGTACTTACAAATTTGATATCTCTTTCCATTATTACAATTGGTTGGTATTTGATTCGGCAATTGATTTAGTAAAAGAAAGAGTTGGTCTCA

mRNA sequence

CTTCCTCTTCGCGTGCTATTCATCTTCACGCCGTCTTCTCGTCCGTTTTCAGCAGCTCATTGTCGCCGGCGCTCTCTCCGTTCAGTGCTGCAGCCGCCGTCTTCCTTTCGCTCGTGCCGCCGTAGCGTCCGTCCTAGCCGTTGGCTCGGTTCTCATCCTTTTTGAAGTTGCATCAAAGAAACAACAAAAACAGTGAAGCCAAGGAGAGCAATACAATGTTTTTGTTCTTCCGCTCGTGCTCAGGACCTCTCCATCAGTCCCAACAGCAGCACCTTGTGTTTCAAATACACCTTCGAACGTATGTAGACGACACAATTAAATGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAACCTTCTGCCAGTGATGAACATAAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTTCCAGTTTCCATCATAACTCAGAAGAAGGAAATTCTAAGAATTCCAATGCGTCCCATTGATTTGATCAGAAAATATCCCTGTATTTTTGAAGAATTTCTCCCCGGAGGGATTGGTATTCAACCTCATGTCCGGCTAACGTCTAAAGTCCTTGAGCTTGATGCTGAAGAGCAGTTAACGTATCAAGGTGAGATTTGTAGACAACAAGCTGCAGATCGACTTGTGAAGCTCTTAATGCTATCAAGAGTCCATAAAATACCTTTAAGTATCATTGATCAATTGAAATGGGACCTGGGTCTTCCTACAGATTACGTTGAAAGTATTGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACACAGAAATTTTGCATCTGGATCAGGAGATATGCGAGCGTTGGAATTGGTGTGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAAGATGGCTGCAAAAGTAAAACCCGACAGTTCGATGGTAACAACTAATACTTTTCCTATGAAATTCTCGAATGGGTTTGTGATGGACAAGAAGTTCAAGAAGTGTGTGGATGAATGGCAAAACCTACCTTACATTTCTCCATACGAAAATGCATCACATCTCTCCCCGAATAGCGATGAATCTGATAAGTGGACTGCTGCGATTTTACACGAGCTTCTTCATATGTTTGTTACGAAGAAGACTGAGAAGGAAAATATATTGTGCATAGGTGAGTACTTTGGTCTTCGGTCAAGGTTTAAGAGAGCATTGCTTCATCATCCAGGGATATTCTACCTATCAAGTAAGGCTGGAACCTACACAGTTGTCTTAAAAGAAGGGTATAAAAGGGGTTCCGTAATTCAGAGTAGCCCCTTGATGAACATTAGAAACAAGTACCTTCACATTATGAACACAGTGAAGGAAGACAGTAAAACAATAAGTGAGCATAGCGGTACTCGTCAACAGAAGCAAGAACAGAAAGAAGGGTCAGATGATGTATCTGGGAAAAAAAATGAAGCTGAATTATTCGACTCCTCAGATGATGAAGATGAAGACGCTAGTAGTAACCGTAATGTTCGTGCGGATCAAAAAGAGGATGGACGGAAGAGACATGTAGATTTCAAAGAAAATGTTGCTAGAAACAGGATGAGATCATCAAAAAGAATGAACTCGACTATACGAAGACCTTCTAGGGATGTTAAAAGCGAGAGGTCAAATAAGACTAAGAGATACCCGGTGAGGACGAAGGTTTAACATAGTTTTGCTTGACTAATAGACATTAAATATCACAAGGAAGGGATAATGAAACCTCTGATATGAAAAGAATCGAAGTTTACTTGAGGCTTTGATTCCTGCATTGGAATGTGAAAGTTCCTTTAACTGGCCTTACTTATTTATTCTGTAGGATAAGTTTCTTTTAGTGCCATAATCCCTTTCATGACAAGTCAATATCCAAAGCCGTTTTTGATTTGGAAGGAGAGAAGTGAAGCTTTCTGATGTGGTGGTACAAGATAGCTAGTTATTTGTCTGTTGTATCTGTCAGGATAGAGCATTACTGCTCGGAATTGTTGTACTTACAAATTTGATATCTCTTTCCATTATTACAATTGGTTGGTATTTGATTCGGCAATTGATTTAGTAAAAGAAAGAGTTGGTCTCA

Coding sequence (CDS)

ATGTTTTTGTTCTTCCGCTCGTGCTCAGGACCTCTCCATCAGTCCCAACAGCAGCACCTTGTGTTTCAAATACACCTTCGAACGTATGTAGACGACACAATTAAATGGGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAACCTTCTGCCAGTGATGAACATAAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTTCCAGTTTCCATCATAACTCAGAAGAAGGAAATTCTAAGAATTCCAATGCGTCCCATTGATTTGATCAGAAAATATCCCTGTATTTTTGAAGAATTTCTCCCCGGAGGGATTGGTATTCAACCTCATGTCCGGCTAACGTCTAAAGTCCTTGAGCTTGATGCTGAAGAGCAGTTAACGTATCAAGGTGAGATTTGTAGACAACAAGCTGCAGATCGACTTGTGAAGCTCTTAATGCTATCAAGAGTCCATAAAATACCTTTAAGTATCATTGATCAATTGAAATGGGACCTGGGTCTTCCTACAGATTACGTTGAAAGTATTGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACACAGAAATTTTGCATCTGGATCAGGAGATATGCGAGCGTTGGAATTGGTGTGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAAGATGGCTGCAAAAGTAAAACCCGACAGTTCGATGGTAACAACTAATACTTTTCCTATGAAATTCTCGAATGGGTTTGTGATGGACAAGAAGTTCAAGAAGTGTGTGGATGAATGGCAAAACCTACCTTACATTTCTCCATACGAAAATGCATCACATCTCTCCCCGAATAGCGATGAATCTGATAAGTGGACTGCTGCGATTTTACACGAGCTTCTTCATATGTTTGTTACGAAGAAGACTGAGAAGGAAAATATATTGTGCATAGGTGAGTACTTTGGTCTTCGGTCAAGGTTTAAGAGAGCATTGCTTCATCATCCAGGGATATTCTACCTATCAAGTAAGGCTGGAACCTACACAGTTGTCTTAAAAGAAGGGTATAAAAGGGGTTCCGTAATTCAGAGTAGCCCCTTGATGAACATTAGAAACAAGTACCTTCACATTATGAACACAGTGAAGGAAGACAGTAAAACAATAAGTGAGCATAGCGGTACTCGTCAACAGAAGCAAGAACAGAAAGAAGGGTCAGATGATGTATCTGGGAAAAAAAATGAAGCTGAATTATTCGACTCCTCAGATGATGAAGATGAAGACGCTAGTAGTAACCGTAATGTTCGTGCGGATCAAAAAGAGGATGGACGGAAGAGACATGTAGATTTCAAAGAAAATGTTGCTAGAAACAGGATGAGATCATCAAAAAGAATGAACTCGACTATACGAAGACCTTCTAGGGATGTTAAAAGCGAGAGGTCAAATAAGACTAAGAGATACCCGGTGAGGACGAAGGTTTAA

Protein sequence

MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKFSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSNRNVRADQKEDGRKRHVDFKENVARNRMRSSKRMNSTIRRPSRDVKSERSNKTKRYPVRTKV

Homology

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BLAST of Tan0006018 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.7e-51
Identity = 125/375 (33.33%), Postives = 202/375 (53.87%), Query Frame = 0


Query: 27  RTYVDDTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRI 86
           RTYVD  +KW RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +
Sbjct: 22  RTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDV 81

Query: 87  PMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLV 146
             +    +RK+P IFEEF+     + P  RLT +  ELD +E++ YQ         DRL 
Sbjct: 82  STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQ--TSADDLRDRLK 141

Query: 147 KLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALE 206
           KL+++S+ + +PLSI+  +KW LGLP DY++     FPD   +     F      ++ L 
Sbjct: 142 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-----FPD-MNLDSSFRFVDMEDGVKGLA 201

Query: 207 LVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKFSNGFVMDKKFKKCVDEWQNLPYIS 266
           +     +   SVL+K A K +     +    FP+  S G  +  K +  + E+Q LPY+S
Sbjct: 202 VDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVS 261

Query: 267 PYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLHH 326
           PY++ S L P+SD ++K     LHELL +FV    E++ +LC+ ++FGL  +  +A   H
Sbjct: 262 PYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERH 321

Query: 327 PGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSGTR 386
           P IFYLS K  T T +L+E Y+  + +++ P++ +R KY+ +M   +   K+     G R
Sbjct: 322 PQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFR 381

Query: 387 QQKQEQKEGSDDVSG 400
            +    K+   D  G
Sbjct: 382 DEGVVDKDLDLDFEG 387

[Close]

BLAST of Tan0006018 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 100/359 (27.86%), Postives = 171/359 (47.63%), Query Frame = 0


Query: 37  VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIPMR---PIDLIR 96
           VRD G D+ +E EK +  V+     I S+P+ ++ +S++      L +  +   P   + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 97  KYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAAD---RLVKLLMLS 156
           K+P +FE      I   P  R+    L   A +Q+ ++ E    Q  D   RL KL+M+S
Sbjct: 107 KFPHVFE------IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMS 166

Query: 157 RVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWNN 216
              +I L  +   + + GLP D+  S++   P +F+++            + +E+V  + 
Sbjct: 167 NTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRD-----KYIEIVEKDP 226

Query: 217 ELATSVLEKMAA---KVKPDSSMVTTNTFPMKFSNGFVMDKKFKKCVDEWQNLPYISPYE 276
            L+   +E++     + K   +     +F + F  GF + K F+  V +WQ LPY SPYE
Sbjct: 227 NLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYE 286

Query: 277 NASHLSPNSDES----DKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLH 336
           + S     S E+    +K + A +HELL + V KK   E I        L  + K  LL 
Sbjct: 287 DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQ 346

Query: 337 HPGIFYLSSKAG---TYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISE 380
           H GIFY+S++      +TV L+EGYKRG +++ + +   R +   ++      +K  +E
Sbjct: 347 HQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAE 394

[Close]

BLAST of Tan0006018 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-27
Identity = 116/439 (26.42%), Postives = 210/439 (47.84%), Query Frame = 0


Query: 34  IKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRI--PMRPIDL 93
           +K  ++   D+ ++R+K L  V+ +++ + S P + + +  + + +  L +    R I L
Sbjct: 61  VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120

Query: 94  IRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKLLMLSR 153
           ++++P +FE    G   ++  +   ++ L LD E  L  + E     A  +L KLLM+S+
Sbjct: 121 LKRFPGVFEVVEEGVYSLRFRLTPAAERLYLD-ELHLKNESE---GLAVTKLRKLLMMSQ 180

Query: 154 VHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWNNE 213
             +I +  I  LK DLGLP ++ ++I   +P YF+VV       G G    LEL  W+ E
Sbjct: 181 DKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVV---QMDRGPG----LELTHWDPE 240

Query: 214 LATSVL----EKMAAKVKPDSSMVTTNTFPMKFS-----NGFVMDKKFKKCVDEWQNLPY 273
           LA S      E+  A+ + + +++     P+KF+      G  + +   + V +++ +PY
Sbjct: 241 LAVSAAEVAEEENRAREEQERNLIIDR--PLKFNRVKLPQGLKLSRGEARRVAQFKEMPY 300

Query: 274 ISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALL 333
           ISPY + SHL   S E +K    ++HE+L + + K+T  +++    E F      +  L+
Sbjct: 301 ISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLI 360

Query: 334 HHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSK----TIS 393
            HP +FY+S K    +V L+E YK   +++ S L+ ++ K   ++   +   +    T  
Sbjct: 361 RHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSE 420

Query: 394 EHSGTRQQKQEQKEGSD-----------------DVSGKKNEAELF----------DSSD 430
           E   T    Q   EGSD                 ++SG K++ +            DS  
Sbjct: 421 EADRTNGAAQMLSEGSDVEDDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSPP 480

[Close]

BLAST of Tan0006018 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.6e-26
Identity = 117/459 (25.49%), Postives = 216/459 (47.06%), Query Frame = 0


Query: 34  IKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIPMRP--IDL 93
           +K  ++   D  V+R+K L  V+NI+  + S+P + + +  + + +  L +  R   I L
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 94  IRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKLLMLSR 153
           +RKYP +FE    G   ++   ++TS+   L  +E +  + E+       +L KL+M+S 
Sbjct: 136 LRKYPGVFEIVEEGAYSLR--FKMTSEAERLYLDE-MRIRNEL-EDVLVVKLRKLVMMSI 195

Query: 154 VHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWNNE 213
             +I L  I  LK DLGLP ++ ++I   +P YF+VV      +  G   ALEL  W+ E
Sbjct: 196 DKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVV-----PTPRGP--ALELTHWDPE 255

Query: 214 LATSVLEKMAAKVKPDSSMVTTN-------TFPMKFS-----NGFVMDKKFKKCVDEWQN 273
           LA S     AA++  D +    +         P KF+      G  + K   + + ++++
Sbjct: 256 LAVS-----AAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 315

Query: 274 LPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKR 333
           + YISPY++ SHL   + E +K    ++HELL +   K+T  +++    E F    + + 
Sbjct: 316 MQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 375

Query: 334 ALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVK-------- 393
            L+ HP +FY+S K    +V L+E Y+   +I   PL  ++ K   +++  +        
Sbjct: 376 MLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPR 435

Query: 394 --EDSKTI----SEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSNRNVRA 453
             E+ + +    S+  G  ++++   E   DV G     +  +  D +  D     +V  
Sbjct: 436 KDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEEDVPP 495

Query: 454 DQKEDGRKRHVDFKENVARNRMRSSKRMNSTIRRPSRDV 465
           +  +D      D +E+  +  +  S R +S+ R+    V
Sbjct: 496 NFDDDDE----DEEEDSVKIGLSPSSRKSSSPRKKEEKV 514

[Close]

BLAST of Tan0006018 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-25
Identity = 105/417 (25.18%), Postives = 207/417 (49.64%), Query Frame = 0


Query: 34  IKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRI--PMRPIDL 93
           +K  ++   D  ++R+K L  V+ +++ + ++P + + +  + + +  L +    R I L
Sbjct: 55  VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114

Query: 94  IRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKLLMLSR 153
           +R++P +F+    G   ++  +   ++ L LD E +L  + E     A  +L KLLM+S+
Sbjct: 115 LRRFPGVFDVVEEGVYSLRFRLTPAAERLYLD-ELRLRNESE---GLAVAKLRKLLMMSQ 174

Query: 154 VHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWNNE 213
             +I +  +  LK DLGLP ++ +++   +P YF+VV       G     ALEL  W+ E
Sbjct: 175 EKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVV---RMDRGP----ALELTHWDPE 234

Query: 214 LATSVL----EKMAAKVKPDSSMVTTNTFPMKFS-----NGFVMDKKFKKCVDEWQNLPY 273
           LA S      E+  A+   + +++     P+KF+      G  + +   + +  ++ +PY
Sbjct: 235 LAVSAAELAEEESRAREAEERNLIIDR--PLKFNRVRLPKGLKLTRGEARRIARFKEMPY 294

Query: 274 ISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALL 333
           ISPY + SHL   SDE +K    ++HE+L + V K+T  +++    E F      +  ++
Sbjct: 295 ISPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMII 354

Query: 334 HHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSG 393
            HP +FY+S K    +V L+E YK   +++ + L+ ++ K +  +  V    +  +  +G
Sbjct: 355 RHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK-MRALVAVPRFPRRAAVGTG 414

Query: 394 TRQQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSNRNVRADQKEDGRKRHVDFK 440
                 E+ EG +     +++    +  DDEDE  S   ++ ++    G K   D++
Sbjct: 415 ------EEAEGMNGSLQSRDQVS-DEEYDDEDEGLSDMEDLISEL--SGGKSDADYE 448

[Close]

BLAST of Tan0006018 vs. NCBI nr
Match: XP_038888019.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038888020.1 protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 768.1 bits (1982), Expect = 4.6e-218
Identity = 406/523 (77.63%), Postives = 426/523 (81.45%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFLFFRSCSGP H+SQQQH +FQIHLRTYVD TI WVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLFFRSCSGPPHRSQQQHHIFQIHLRTYVDGTINWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQKKE+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTSKVL
Sbjct: 61  FIKSEPSKSVPVSIITQKKEVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLTYQ E CRQQAADRLV+LLMLSRVHK+P+SIIDQLKWDLGLP DY++SIVPD
Sbjct: 121 ELDAEEQLTYQTETCRQQAADRLVRLLMLSRVHKVPVSIIDQLKWDLGLPKDYIQSIVPD 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKF 240
           FPDYFKVVGH+NFA GS DMRALELVCWNNELATSVLE MAAKVKPD+S     TFPMKF
Sbjct: 181 FPDYFKVVGHQNFAYGSDDMRALELVCWNNELATSVLENMAAKVKPDTSKGMHITFPMKF 240

Query: 241 SNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTE 300
           SNGF MDKKFKK VDEWQ LPYISPYENASHLSPNSDESDKWTAAILHELLHM VTKKTE
Sbjct: 241 SNGFEMDKKFKKWVDEWQTLPYISPYENASHLSPNSDESDKWTAAILHELLHMLVTKKTE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIR 360
           KENILCIGEYFGLRSRFKRALLHHPGIFY+SSKAGTYTVVLKEGYKRGSVI+ SPLMNIR
Sbjct: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYVSSKAGTYTVVLKEGYKRGSVIEISPLMNIR 360

Query: 361 NKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAEL--FDSSDDEDEDAS 420
           NKYLH+MNTVKED KT SEHSGTR QKQEQKEGSDD  GK+NEAEL  F   DD+DED  
Sbjct: 361 NKYLHLMNTVKEDCKTTSEHSGTRHQKQEQKEGSDDGPGKQNEAELLNFLDDDDKDEDED 420

Query: 421 SNR------------------------------------------------NVRADQKED 474
            N                                                 NVRAD++++
Sbjct: 421 ENEDESTRSHCSVRADRRDSVRADRRDSVRADRRDSVRADRRDSVRADRRDNVRADRRDN 480

[Close]

BLAST of Tan0006018 vs. NCBI nr
Match: XP_023554109.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo] >XP_023554110.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 761.5 bits (1965), Expect = 4.3e-216
Identity = 403/506 (79.64%), Postives = 434/506 (85.77%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CSGP H+ +QQ  VFQI LRTYVD TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSGPPHKCRQQSHVFQISLRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLTYQ EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTYQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTN-TFPMK 240
           FPDYFKVVGH+NFASG G M+ALELVCW+NELATSVLEKMAAK KP S+    + TFPMK
Sbjct: 181 FPDYFKVVGHQNFASGWGTMQALELVCWSNELATSVLEKMAAKGKPGSTSKGMHVTFPMK 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPYENA+HL PNSDESDKW+ AILHE LHM +TKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYENATHLPPNSDESDKWSVAILHEFLHMLITKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDD------- 420
           RNKYLH+MNTVKED KT SEH  TRQQKQEQKEGSDD SGK+NEAELF+SSDD       
Sbjct: 361 RNKYLHLMNTVKEDGKTTSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSSDDEDDEEDE 420

Query: 421 -----EDEDASSNRNVRADQKEDG-RKRHVDFKENVARNRMRSSKRMNSTIRRPS----- 480
                EDEDASSN N++AD+KEDG  KR+VD KEN  R+RMRSSKR NS+ +RPS     
Sbjct: 421 EEDQGEDEDASSNHNIQADRKEDGPSKRYVDLKENAVRDRMRSSKRKNSSAKRPSRDRDA 480

Query: 481 ------RDVKSERSNKTKRYPVRTKV 482
                 RD K ERSN +KRY VRTKV
Sbjct: 481 KRPSRDRDAKRERSNMSKRYSVRTKV 506

[Close]

BLAST of Tan0006018 vs. NCBI nr
Match: XP_022952527.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata])

HSP 1 Score: 760.0 bits (1961), Expect = 1.2e-215
Identity = 403/494 (81.58%), Postives = 432/494 (87.45%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CSGP H+ +QQ  VFQI LRTYVD TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSGPPHKCRQQSHVFQISLRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLTYQ EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTYQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDS-SMVTTNTFPMK 240
           FPDYFKVVGH+NFASG G M+ALELVCWNNELATSVLEKMAAK KP S S     TFPMK
Sbjct: 181 FPDYFKVVGHQNFASGWGTMQALELVCWNNELATSVLEKMAAKGKPGSTSKGMPITFPMK 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPY NA+HL PNSDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYINATHLPPNSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDD------- 420
           RNKYLH+MNTVKEDSKT SEH  TRQQKQEQKEGSDD SGK+NEAELF+S D+       
Sbjct: 361 RNKYLHLMNTVKEDSKTTSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSDDEDEDEEED 420

Query: 421 --EDEDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRRPS--RDVKSE 480
             EDE+ASSN+N++AD+KEDGR KRHVD KEN  R+RMRSSKR N + +RPS  RD K E
Sbjct: 421 QGEDENASSNQNIQADRKEDGRNKRHVDLKENSVRDRMRSSKRRNLSAKRPSRDRDAKRE 480

Query: 481 RSNKTKRYPVRTKV 482
           RSN +KR  VRTKV
Sbjct: 481 RSNMSKRSSVRTKV 494

[Close]

BLAST of Tan0006018 vs. NCBI nr
Match: XP_022147962.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 749.2 bits (1933), Expect = 2.2e-212
Identity = 391/483 (80.95%), Postives = 424/483 (87.78%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFL  R      +QSQQQH +F +++RTYVD TIKWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLLSR------NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQL+YQGE CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKWDLGLP DYV+SIVPD
Sbjct: 121 ELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPD 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKF 240
           FPDYFKVVGH+NFASGSGD RALELVCWNNELATSVLEKMAAK +   S     +FPMKF
Sbjct: 181 FPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAETGVSKGMPISFPMKF 240

Query: 241 SNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTE 300
           SNGF MDKKFKK VDEWQ LPYISPYENASHLSP+SDESDKW  AILHELLHM + KK E
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIR 360
           KE IL IGEYFGLRSRFKRALLHHPGIFYLSSK GTYTVVLKEGYKRGSVI++SPL+NIR
Sbjct: 301 KETILSIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIR 360

Query: 361 NKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSN 420
           NKYLH+MNTVKEDSKT +E  GT QQK+E+KE SDD + K+NEAEL DSSD+E ED SSN
Sbjct: 361 NKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSDEEAEDDSSN 420

Query: 421 RNVRADQKE--DGRKRHVDFKENVARNRMRSSKRMNSTIRRPSRDVKSERSNKTKRYPVR 480
            N RAD+KE   GR+RHVDF+ENV RNR+RSSKRMNST  RPSRDVK ERSN +K Y VR
Sbjct: 421 LNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVR 477

Query: 481 TKV 482
           TKV
Sbjct: 481 TKV 477

[Close]

BLAST of Tan0006018 vs. NCBI nr
Match: XP_022969363.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 [Cucurbita maxima])

HSP 1 Score: 748.8 bits (1932), Expect = 2.9e-212
Identity = 399/494 (80.77%), Postives = 430/494 (87.04%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CS P H+ +QQ  VFQI LRTY D TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSVPPHKCRQQSHVFQISLRTYADGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLT Q EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTNQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTN-TFPMK 240
           FPDYFKVVGH+NFASG G  +ALELVCWNNELATSVLEKMAAK KP S+    + TFPM 
Sbjct: 181 FPDYFKVVGHQNFASGWGTKQALELVCWNNELATSVLEKMAAKGKPGSTSKGMHITFPMN 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPYE+A+HL P+SDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYESATHLPPSSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTI-SEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDED---- 420
           RNKYLH+MNTVKEDSKT  SEH  TRQQKQEQKEGSDD SGK+NEAELF+SS +ED    
Sbjct: 361 RNKYLHLMNTVKEDSKTTSSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSSANEDEDED 420

Query: 421 ----EDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRRPS--RDVKSE 480
               EDASSN N++AD+KEDGR KRHVD KEN  R+RMRSSKR NS+ +RPS  RD K E
Sbjct: 421 EGEGEDASSNHNIQADRKEDGRSKRHVDLKENAVRDRMRSSKRKNSSAKRPSRDRDAKRE 480

Query: 481 RSNKTKRYPVRTKV 482
           RSN +KRY VRTKV
Sbjct: 481 RSNMSKRYSVRTKV 494

[Close]

BLAST of Tan0006018 vs. ExPASy TrEMBL
Match: A0A6J1GKN4 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111455191 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 6.0e-216
Identity = 403/494 (81.58%), Postives = 432/494 (87.45%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CSGP H+ +QQ  VFQI LRTYVD TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSGPPHKCRQQSHVFQISLRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLTYQ EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTYQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDS-SMVTTNTFPMK 240
           FPDYFKVVGH+NFASG G M+ALELVCWNNELATSVLEKMAAK KP S S     TFPMK
Sbjct: 181 FPDYFKVVGHQNFASGWGTMQALELVCWNNELATSVLEKMAAKGKPGSTSKGMPITFPMK 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPY NA+HL PNSDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYINATHLPPNSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDD------- 420
           RNKYLH+MNTVKEDSKT SEH  TRQQKQEQKEGSDD SGK+NEAELF+S D+       
Sbjct: 361 RNKYLHLMNTVKEDSKTTSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSDDEDEDEEED 420

Query: 421 --EDEDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRRPS--RDVKSE 480
             EDE+ASSN+N++AD+KEDGR KRHVD KEN  R+RMRSSKR N + +RPS  RD K E
Sbjct: 421 QGEDENASSNQNIQADRKEDGRNKRHVDLKENSVRDRMRSSKRRNLSAKRPSRDRDAKRE 480

Query: 481 RSNKTKRYPVRTKV 482
           RSN +KR  VRTKV
Sbjct: 481 RSNMSKRSSVRTKV 494

[Close]

BLAST of Tan0006018 vs. ExPASy TrEMBL
Match: A0A6J1D3S2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111016760 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 1.1e-212
Identity = 391/483 (80.95%), Postives = 424/483 (87.78%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           MFL  R      +QSQQQH +F +++RTYVD TIKWVRDRGLDHAVEREKNLLPVMNIKD
Sbjct: 1   MFLLSR------NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKD 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQL+YQGE CRQ+AAD+LVKLLM+SR HKIPLSIIDQLKWDLGLP DYV+SIVPD
Sbjct: 121 ELDAEEQLSYQGENCRQRAADQLVKLLMISRFHKIPLSIIDQLKWDLGLPKDYVQSIVPD 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKF 240
           FPDYFKVVGH+NFASGSGD RALELVCWNNELATSVLEKMAAK +   S     +FPMKF
Sbjct: 181 FPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAETGVSKGMPISFPMKF 240

Query: 241 SNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTE 300
           SNGF MDKKFKK VDEWQ LPYISPYENASHLSP+SDESDKW  AILHELLHM + KK E
Sbjct: 241 SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIE 300

Query: 301 KENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIR 360
           KE IL IGEYFGLRSRFKRALLHHPGIFYLSSK GTYTVVLKEGYKRGSVI++SPL+NIR
Sbjct: 301 KETILSIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIR 360

Query: 361 NKYLHIMNTVKEDSKTISEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSN 420
           NKYLH+MNTVKEDSKT +E  GT QQK+E+KE SDD + K+NEAEL DSSD+E ED SSN
Sbjct: 361 NKYLHLMNTVKEDSKTTTEQGGTCQQKKEEKERSDDATRKENEAELLDSSDEEAEDDSSN 420

Query: 421 RNVRADQKE--DGRKRHVDFKENVARNRMRSSKRMNSTIRRPSRDVKSERSNKTKRYPVR 480
            N RAD+KE   GR+RHVDF+ENV RNR+RSSKRMNST  RPSRDVK ERSN +K Y VR
Sbjct: 421 LNARADRKEAAGGRRRHVDFQENVGRNRVRSSKRMNSTSGRPSRDVKRERSNNSKGYQVR 477

Query: 481 TKV 482
           TKV
Sbjct: 481 TKV 477

[Close]

BLAST of Tan0006018 vs. ExPASy TrEMBL
Match: A0A6J1I0R6 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111468390 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.4e-212
Identity = 399/494 (80.77%), Postives = 430/494 (87.04%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CS P H+ +QQ  VFQI LRTY D TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSVPPHKCRQQSHVFQISLRTYADGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLT Q EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTNQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTN-TFPMK 240
           FPDYFKVVGH+NFASG G  +ALELVCWNNELATSVLEKMAAK KP S+    + TFPM 
Sbjct: 181 FPDYFKVVGHQNFASGWGTKQALELVCWNNELATSVLEKMAAKGKPGSTSKGMHITFPMN 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPYE+A+HL P+SDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYESATHLPPSSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTI-SEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDED---- 420
           RNKYLH+MNTVKEDSKT  SEH  TRQQKQEQKEGSDD SGK+NEAELF+SS +ED    
Sbjct: 361 RNKYLHLMNTVKEDSKTTSSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSSANEDEDED 420

Query: 421 ----EDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRRPS--RDVKSE 480
               EDASSN N++AD+KEDGR KRHVD KEN  R+RMRSSKR NS+ +RPS  RD K E
Sbjct: 421 EGEGEDASSNHNIQADRKEDGRSKRHVDLKENAVRDRMRSSKRKNSSAKRPSRDRDAKRE 480

Query: 481 RSNKTKRYPVRTKV 482
           RSN +KRY VRTKV
Sbjct: 481 RSNMSKRYSVRTKV 494

[Close]

BLAST of Tan0006018 vs. ExPASy TrEMBL
Match: A0A6J1HW55 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111468390 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 4.0e-212
Identity = 399/498 (80.12%), Postives = 430/498 (86.35%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CS P H+ +QQ  VFQI LRTY D TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSVPPHKCRQQSHVFQISLRTYADGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLT Q EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTNQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTN-TFPMK 240
           FPDYFKVVGH+NFASG G  +ALELVCWNNELATSVLEKMAAK KP S+    + TFPM 
Sbjct: 181 FPDYFKVVGHQNFASGWGTKQALELVCWNNELATSVLEKMAAKGKPGSTSKGMHITFPMN 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPYE+A+HL P+SDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYESATHLPPSSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTI-SEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDED---- 420
           RNKYLH+MNTVKEDSKT  SEH  TRQQKQEQKEGSDD SGK+NEAELF+SS +ED    
Sbjct: 361 RNKYLHLMNTVKEDSKTTSSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSSANEDEDED 420

Query: 421 --------EDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRRPS--RD 480
                   EDASSN N++AD+KEDGR KRHVD KEN  R+RMRSSKR NS+ +RPS  RD
Sbjct: 421 EDEDEGEGEDASSNHNIQADRKEDGRSKRHVDLKENAVRDRMRSSKRKNSSAKRPSRDRD 480

Query: 481 VKSERSNKTKRYPVRTKV 482
            K ERSN +KRY VRTKV
Sbjct: 481 AKRERSNMSKRYSVRTKV 498

[Close]

BLAST of Tan0006018 vs. ExPASy TrEMBL
Match: A0A6J1HXK3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468390 PE=4 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 2.0e-211
Identity = 399/504 (79.17%), Postives = 430/504 (85.32%), Query Frame = 0


Query: 1   MFLFFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKD 60
           M LFFR CS P H+ +QQ  VFQI LRTY D TIKWVRDRGLDHAVEREKNLLPVMNIK+
Sbjct: 1   MSLFFRFCSVPPHKCRQQSHVFQISLRTYADGTIKWVRDRGLDHAVEREKNLLPVMNIKN 60

Query: 61  FIKSEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVL 120
           FIKSEPSKSVPVSIITQK+E+LRIP RPIDLIRKYP IFEEFLPGGIGIQPHVRLTS+VL
Sbjct: 61  FIKSEPSKSVPVSIITQKREVLRIPTRPIDLIRKYPTIFEEFLPGGIGIQPHVRLTSQVL 120

Query: 121 ELDAEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPD 180
           ELDAEEQLT Q EICRQQAADRLVKLLMLSRVHKIPLSIIDQLKW+LGLP DYV+SIVP+
Sbjct: 121 ELDAEEQLTNQSEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWELGLPKDYVQSIVPE 180

Query: 181 FPDYFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDSSMVTTN-TFPMK 240
           FPDYFKVVGH+NFASG G  +ALELVCWNNELATSVLEKMAAK KP S+    + TFPM 
Sbjct: 181 FPDYFKVVGHQNFASGWGTKQALELVCWNNELATSVLEKMAAKGKPGSTSKGMHITFPMN 240

Query: 241 FSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMFVTKKT 300
           +SNGF MDKKFKK VDEWQ LPYISPYE+A+HL P+SDESDKW+ AILHE LHM VTKKT
Sbjct: 241 YSNGFEMDKKFKKWVDEWQKLPYISPYESATHLPPSSDESDKWSVAILHEFLHMLVTKKT 300

Query: 301 EKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNI 360
           EKE +L IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVI+SSPLM I
Sbjct: 301 EKETVLGIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEAYKRGSVIESSPLMII 360

Query: 361 RNKYLHIMNTVKEDSKTI-SEHSGTRQQKQEQKEGSDDVSGKKNEAELFDSSDDED---- 420
           RNKYLH+MNTVKEDSKT  SEH  TRQQKQEQKEGSDD SGK+NEAELF+SS +ED    
Sbjct: 361 RNKYLHLMNTVKEDSKTTSSEHKSTRQQKQEQKEGSDDGSGKQNEAELFNSSANEDEDED 420

Query: 421 --------------EDASSNRNVRADQKEDGR-KRHVDFKENVARNRMRSSKRMNSTIRR 480
                         EDASSN N++AD+KEDGR KRHVD KEN  R+RMRSSKR NS+ +R
Sbjct: 421 EDEDEDEDEDEGEGEDASSNHNIQADRKEDGRSKRHVDLKENAVRDRMRSSKRKNSSAKR 480

Query: 481 PS--RDVKSERSNKTKRYPVRTKV 482
           PS  RD K ERSN +KRY VRTKV
Sbjct: 481 PSRDRDAKRERSNMSKRYSVRTKV 504

[Close]

BLAST of Tan0006018 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 446.8 bits (1148), Expect = 2.2e-125
Identity = 243/452 (53.76%), Postives = 328/452 (72.57%), Query Frame = 0


Query: 30  VDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIPMRPI 89
           V+DT K+VRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +K+ LR+P+RPI
Sbjct: 25  VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPI 84

Query: 90  DLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKLLML 149
           + IR +P +F+EFLPGGIGI PH+ LT ++L  DA+EQL Y  E  +Q  ADRL+KLLM+
Sbjct: 85  EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMI 144

Query: 150 SRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELVCWN 209
           +R++KIPL I+D LKWDLGLP DYVE++VP+FPDYF+V+  +     SG+   LELVCW+
Sbjct: 145 NRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSK-LRGCSGE---LELVCWS 204

Query: 210 NELATSVLEKMAAKV-KPDSSMVTTNTFPMKFSNGFVMDKKFKKCVDEWQNLPYISPYEN 269
           NE A SVLEK A  + K + +  +   FPMKFSNGFV+DKK KK +D+WQ LPYISPYEN
Sbjct: 205 NEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYEN 264

Query: 270 ASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLHHPGIF 329
           A HLS  SDESDKW AA+LHE++++FV+KK EK+ IL +GE+ GLRSRFKR L +HPGIF
Sbjct: 265 ALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIF 324

Query: 330 YLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSGTRQQKQ 389
           YLSSK  T+TVVL++GYKRG +I+S+ L+  RN+Y+ +MNTVK+D+K +S  S    +K+
Sbjct: 325 YLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSS----KKE 384

Query: 390 EQKEGSDDVSGKKNEAELFDSSDDEDEDASSNRNVRADQKEDGRKRHVDFKENVARNRMR 449
           ++ +   +V     +AE  D S  + ED      V  D+ +D     VD  +++ R R  
Sbjct: 385 DKGKVEGEVCDTDAKAENDDISGSDVEDDRQGDFVDDDEDDD----EVDQNQDLERGRRN 444

Query: 450 SSKRM------NSTIRRPSRDVKSERSNKTKR 475
           SS R       NS  R  ++  +S+ S KT++
Sbjct: 445 SSPRSGRRSFGNSGSRDKAQSRRSKISLKTEK 464

[Close]

BLAST of Tan0006018 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 288.5 bits (737), Expect = 9.9e-78
Identity = 150/367 (40.87%), Postives = 225/367 (61.31%), Query Frame = 0


Query: 27  RTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIPM 86
           RT+V+  +KWV D  LD AV+REKNL  V+++KD I S PSKS+P+S ++  K ++ + +
Sbjct: 16  RTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHI 75

Query: 87  RPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLVKL 146
                 +KYP +F  F P       HVRLT + L L  EE+  +     R     RL K 
Sbjct: 76  TAAAFFQKYPSVFTTFQPSP-SHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKF 135

Query: 147 LMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALELV 206
           LML+    +PL ++D+ ++DLGLP DY+ S++ D+P+YF+V   ++  +G   + AL + 
Sbjct: 136 LMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTL-ALTIS 195

Query: 207 CWNNELATSVLEKMAAKVKPDSSMVTTN---TFPMKFSNGFVMDKKFKKCVDEWQNLPYI 266
              N L  S +E+  A +  D S V       + M F  G+ + K+ K  V++WQNLPYI
Sbjct: 196 SRRNNLPVSEMERREATI--DGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYI 255

Query: 267 SPYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLH 326
           SPYENA HL   SD+++KW  A+LHELL + V+KKTE +N++C+GEY G   RFK+AL+H
Sbjct: 256 SPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVH 315

Query: 327 HPGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSGT 386
           HPGIFY+S K  T TVVL+E Y +  +++  PLM IR++Y+++M+      K    H   
Sbjct: 316 HPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKRDYVHGVE 375

Query: 387 RQQKQEQ 391
           R  ++++
Sbjct: 376 RSNRKKR 378

[Close]

BLAST of Tan0006018 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 222.2 bits (565), Expect = 8.7e-58
Identity = 125/375 (33.33%), Postives = 198/375 (52.80%), Query Frame = 0


Query: 4   FFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIK 63
           F  S S   HQ QQ        +       +KWV+++ LDH ++ E +L     +KD IK
Sbjct: 8   FLFSVSKLFHQHQQWR-----GMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIK 67

Query: 64  SEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELD 123
             P+  +    +   +++L + +  +  +R+YP +F EF        P  +LT   L LD
Sbjct: 68  RSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLD 127

Query: 124 AEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPD 183
           ++E++ +Q         +RL ++LM+ R   + L  +  LK+DLGLP +Y +++V  +PD
Sbjct: 128 SQEEIIHQSH--EADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPD 187

Query: 184 YFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKM---------AAKVKPDSSMVTTN 243
           +F       F   S     L+LV W +E A S L+K           ++ +      +T 
Sbjct: 188 HF------CFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTL 247

Query: 244 TFPMKFSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMF 303
           TFPM F  G+   KK K  +DE+Q LPYISPY++ S++ P SD  +K   A+LHELL + 
Sbjct: 248 TFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLT 307

Query: 304 VTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSS 363
           + KKT++  +  +     +  +F R    +PGIFYLS K  T TV+LKEGY+RG ++   
Sbjct: 308 IHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPH 367

Query: 364 PLMNIRNKYLHIMNT 370
           PL  +R+K+ H+M T
Sbjct: 368 PLTRLRDKFYHVMRT 369

[Close]

BLAST of Tan0006018 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.9e-53
Identity = 125/375 (33.33%), Postives = 192/375 (51.20%), Query Frame = 0


Query: 4   FFRSCSGPLHQSQQQHLVFQIHLRTYVDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIK 63
           F  S S   HQ QQ        +       +KWV+++ LDH ++ E +L     +KD IK
Sbjct: 8   FLFSVSKLFHQHQQWR-----GMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIK 67

Query: 64  SEPSKSVPVSIITQKKEILRIPMRPIDLIRKYPCIFEEFLPGGIGIQPHVRLTSKVLELD 123
             P+       IT ++             ++YP +F EF        P  +LT   L LD
Sbjct: 68  RSPTG------ITIRENF------NCYWNKRYPTLFHEFPHARYASLPCFKLTDTALMLD 127

Query: 124 AEEQLTYQGEICRQQAADRLVKLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPD 183
           ++E++ +Q         +RL ++LM+ R   + L  +  LK+DLGLP +Y +++V  +PD
Sbjct: 128 SQEEIIHQSH--EADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPD 187

Query: 184 YFKVVGHRNFASGSGDMRALELVCWNNELATSVLEKM---------AAKVKPDSSMVTTN 243
           +F       F   S     L+LV W +E A S L+K           ++ +      +T 
Sbjct: 188 HF------CFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTL 247

Query: 244 TFPMKFSNGFVMDKKFKKCVDEWQNLPYISPYENASHLSPNSDESDKWTAAILHELLHMF 303
           TFPM F  G+   KK K  +DE+Q LPYISPY++ S++ P SD  +K   A+LHELL + 
Sbjct: 248 TFPMSFPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLT 307

Query: 304 VTKKTEKENILCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIQSS 363
           + KKT++  +  +     +  +F R    +PGIFYLS K  T TV+LKEGY+RG ++   
Sbjct: 308 IHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPH 357

Query: 364 PLMNIRNKYLHIMNT 370
           PL  +R+K+ H+M T
Sbjct: 368 PLTRLRDKFYHVMRT 357

[Close]

BLAST of Tan0006018 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 206.5 bits (524), Expect = 4.9e-53
Identity = 139/396 (35.10%), Postives = 208/396 (52.53%), Query Frame = 0


Query: 30  VDDTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKKEILRIP--MR 89
           V+  +KWV+DR LD  V REK+L  V N+   I + P   +P+  +   +  L +P  ++
Sbjct: 33  VNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELK 92

Query: 90  PIDLIRKYPCIFEEFL---PGGIGIQPHVRLTSKVLELDAEEQLTYQGEICRQQAADRLV 149
               IR+YP IF E       G  + P   LT + ++L  EE       +  +    RL 
Sbjct: 93  LSAFIRRYPNIFVEHCYWDSAGTSV-PCFGLTRETIDLYYEE--VDVSRVNERDVLVRLC 152

Query: 150 KLLMLSRVHKIPLSIIDQLKWDLGLPTDYVESIVPDFPDYFKVVGHRNFASGSGDMRALE 209
           KLLML+    + L  ID L+WDLGLP DY +S++   PD F +V        S D+  L+
Sbjct: 153 KLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLV------KLSSDLDGLK 212

Query: 210 LVCWNNELATSVLEKMAAKVKPDSSMVTTNTFPMKFSNGFVMDKKFKKCVDEWQNLPYIS 269
           L+ W+  LA S ++ +   V  D  M     FP+KF+ GF + +K  + + EWQ LPY S
Sbjct: 213 LIHWDEHLAVSQMQ-LREDVGNDERM----AFPVKFTRGFGLKRKSIEWLQEWQRLPYTS 272

Query: 270 PYENASHLSPNSDESDKWTAAILHELLHMFVTKKTEKENILCIGEYFGLRSRFKRALLHH 329
           PY +ASHL P +D S+K    + HELLH+ + KKTE++N+  + + F L  +F +    H
Sbjct: 273 PYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERH 332

Query: 330 PGIFYLSSKAGTYTVVLKEGYKRGSVIQSSPLMNIRNKYLHIMNTVKEDSKTISEHSGTR 389
           PGIFY+S K  T TV+L+E Y R  +I+  PL+ +R K+ ++MN          E    R
Sbjct: 333 PGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMN----------EGFLDR 392

Query: 390 QQKQEQKEGSDDVSGKKNEAELFDSSDDEDEDASSN 421
            +   QK    D+  K N    +    DE+E+  +N
Sbjct: 393 SRGLYQKSVEADLE-KNNIKTSYPVWSDEEEELDNN 403

The following BLAST results are available for this feature:

BLAST of Tan0006018 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	7.7e-51	33.33	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
Q689D6	2.8e-29	27.86	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q65XL5	1.6e-27	26.42	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	6.6e-26	25.49	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
B6TTV8	1.1e-25	25.18	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]

BLAST of Tan0006018 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888019.1	4.6e-218	77.63	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038888020.1 ...	[more]
XP_023554109.1	4.3e-216	79.64	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo] >XP_023554110.1...	[more]
XP_022952527.1	1.2e-215	81.58	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]	[more]
XP_022147962.1	2.2e-212	80.95	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]
XP_022969363.1	2.9e-212	80.77	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 [Cucurbita maxima]	[more]

BLAST of Tan0006018 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKN4	6.0e-216	81.58	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11145519...	[more]
A0A6J1D3S2	1.1e-212	80.95	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110167...	[more]
A0A6J1I0R6	1.4e-212	80.77	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HW55	4.0e-212	80.12	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HXK3	2.0e-211	79.17	protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Tan0006018 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71850.1	2.2e-125	53.76	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	9.9e-78	40.87	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	8.7e-58	33.33	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	2.9e-53	33.33	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	4.9e-53	35.10	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 37..371 e-value: 9.0E-112 score: 373.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..407
None	No IPR available	PANTHER	PTHR31476:SF16	F14O23.23 PROTEIN	coord: 18..440
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 18..440

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006018.1	Tan0006018.1	mRNA
Tan0006018.2	Tan0006018.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding