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Tan0005982 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCCTCCGTTTCTTCTCTATACTTTGGTTGTCACACGCATCTTCTAACGAAAACGACGTCGTTGAAGACAAACGACAAAAAACGACAGAGCCTTTTTCTTCTCCATTTCCCCTTTCTCTCTTTAAAAATATCTGTAATCTCTCTTCAAATTCCTCACGGATTCTCCCAAAAACCTCCGGATTCCATAGATTCATCTTCAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAGCCATGGACGGCGGCGGAAATGGCCTGTGCAGGCAGAGCAGCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGGACGTTTTCAAGGAGAAATCAACAACGCCTTCAAAATCCTCCGATGATTCGAATTTATTCGTCGATTCGTCCATTTCCGATTCCGTTTCCGCTAATCACTTTCCGTCCGCTTCCAGAATGATTCCGAGGCCCAACGGCGGCGGCGGCGGCAATGTTCAGATTGCTCCTCGATCGGCTCCTCGATCGATTCCGCAGTGGTTTAAACCTAACGGAAGTAAGAACCCTAGGAAATTCGATTCGGAGCACGATGATTCCAGCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAAGGATTTGAGAACAGAGTTCCGCCGCATGAATTGATAGCGAAGAGACTGGCTAGCGCTCAGATTTCGTCGTTCTCAGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCCGTTCTTACAAAAACTGGTTTTCTCGAATCACTATGACATTCAATTTGCAGTTATCGTCAATCTTTCTTTAGGGATCTGTAAATAATTTCTCTATTTTCTAGGGGCATTTTTGACATTTCAATATTGTCCTTCGTGTGGTTCGTAATTCTTTGAGTCAAATGTACATATAAATGTGGCCTAGAATGCAAGGATAATAGATATTAGGTAGGATAAAGATCAACTTGTATAAAAATTGTAGTAGAACATTTGAATCTTCTGAATGGGTTATTTGAGATTGCGATTATTGTCTTTGATGTTTGGAGTTTGAG AATCCTCCGTTTCTTCTCTATACTTTGGTTGTCACACGCATCTTCTAACGAAAACGACGTCGTTGAAGACAAACGACAAAAAACGACAGAGCCTTTTTCTTCTCCATTTCCCCTTTCTCTCTTTAAAAATATCTGTAATCTCTCTTCAAATTCCTCACGGATTCTCCCAAAAACCTCCGGATTCCATAGATTCATCTTCAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAGCCATGGACGGCGGCGGAAATGGCCTGTGCAGGCAGAGCAGCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGGACGTTTTCAAGGAGAAATCAACAACGCCTTCAAAATCCTCCGATGATTCGAATTTATTCGTCGATTCGTCCATTTCCGATTCCGTTTCCGCTAATCACTTTCCGTCCGCTTCCAGAATGATTCCGAGGCCCAACGGCGGCGGCGGCGGCAATGTTCAGATTGCTCCTCGATCGGCTCCTCGATCGATTCCGCAGTGGTTTAAACCTAACGGAAGTAAGAACCCTAGGAAATTCGATTCGGAGCACGATGATTCCAGCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAAGGATTTGAGAACAGAGTTCCGCCGCATGAATTGATAGCGAAGAGACTGGCTAGCGCTCAGATTTCGTCGTTCTCAGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCCGTTCTTACAAAAACTGGTTTTCTCGAATCACTATGACATTCAATTTGCAGTTATCGTCAATCTTTCTTTAGGGATCTGTAAATAATTTCTCTATTTTCTAGGGGCATTTTTGACATTTCAATATTGTCCTTCGTGTGGTTCGTAATTCTTTGAGTCAAATGTACATATAAATGTGGCCTAGAATGCAAGGATAATAGATATTAGGTAGGATAAAGATCAACTTGTATAAAAATTGTAGTAGAACATTTGAATCTTCTGAATGGGTTATTTGAGATTGCGATTATTGTCTTTGATGTTTGGAGTTTGAG ATGGACGGCGGCGGAAATGGCCTGTGCAGGCAGAGCAGCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGGACGTTTTCAAGGAGAAATCAACAACGCCTTCAAAATCCTCCGATGATTCGAATTTATTCGTCGATTCGTCCATTTCCGATTCCGTTTCCGCTAATCACTTTCCGTCCGCTTCCAGAATGATTCCGAGGCCCAACGGCGGCGGCGGCGGCAATGTTCAGATTGCTCCTCGATCGGCTCCTCGATCGATTCCGCAGTGGTTTAAACCTAACGGAAGTAAGAACCCTAGGAAATTCGATTCGGAGCACGATGATTCCAGCGACGGCGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAAGGATTTGAGAACAGAGTTCCGCCGCATGAATTGATAGCGAAGAGACTGGCTAGCGCTCAGATTTCGTCGTTCTCAGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCCGTTCTTACAAAAACTGGTTTTCTCGAATCACTATGA MDGGGNGLCRQSSALWRSFRNGDFEEEDVWDVFKEKSTTPSKSSDDSNLFVDSSISDSVSANHFPSASRMIPRPNGGGGGNVQIAPRSAPRSIPQWFKPNGSKNPRKFDSEHDDSSDGEEEEEEEEDEEGFENRVPPHELIAKRLASAQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL Homology
BLAST of Tan0005982 vs. NCBI nr
Match: XP_022139627.1 (uncharacterized protein LOC111010482 [Momordica charantia]) HSP 1 Score: 269.2 bits (687), Expect = 2.6e-68 Identity = 152/189 (80.42%), Postives = 160/189 (84.66%), Query Frame = 0
BLAST of Tan0005982 vs. NCBI nr
Match: XP_023536166.1 (uncharacterized protein LOC111797411 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66 Identity = 144/186 (77.42%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of Tan0005982 vs. NCBI nr
Match: KAG6592046.1 (hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66 Identity = 144/186 (77.42%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of Tan0005982 vs. NCBI nr
Match: KAG7024924.1 (hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66 Identity = 144/186 (77.42%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of Tan0005982 vs. NCBI nr
Match: XP_022936189.1 (uncharacterized protein LOC111442861 [Cucurbita moschata]) HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64 Identity = 143/186 (76.88%), Postives = 154/186 (82.80%), Query Frame = 0
BLAST of Tan0005982 vs. ExPASy TrEMBL
Match: A0A6J1CEH3 (uncharacterized protein LOC111010482 OS=Momordica charantia OX=3673 GN=LOC111010482 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68 Identity = 152/189 (80.42%), Postives = 160/189 (84.66%), Query Frame = 0
BLAST of Tan0005982 vs. ExPASy TrEMBL
Match: A0A6J1F7L6 (uncharacterized protein LOC111442861 OS=Cucurbita moschata OX=3662 GN=LOC111442861 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 6.4e-65 Identity = 143/186 (76.88%), Postives = 154/186 (82.80%), Query Frame = 0
BLAST of Tan0005982 vs. ExPASy TrEMBL
Match: A0A6J1FSC1 (uncharacterized protein LOC111446424 OS=Cucurbita moschata OX=3662 GN=LOC111446424 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60 Identity = 140/185 (75.68%), Postives = 148/185 (80.00%), Query Frame = 0
BLAST of Tan0005982 vs. ExPASy TrEMBL
Match: A0A6J1IX28 (uncharacterized protein LOC111480685 OS=Cucurbita maxima OX=3661 GN=LOC111480685 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 6.4e-57 Identity = 135/185 (72.97%), Postives = 145/185 (78.38%), Query Frame = 0
BLAST of Tan0005982 vs. ExPASy TrEMBL
Match: A0A0A0K3A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211080 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44 Identity = 123/196 (62.76%), Postives = 134/196 (68.37%), Query Frame = 0
BLAST of Tan0005982 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24 Identity = 78/164 (47.56%), Postives = 95/164 (57.93%), Query Frame = 0
BLAST of Tan0005982 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 101.3 bits (251), Expect = 8.6e-22 Identity = 73/162 (45.06%), Postives = 96/162 (59.26%), Query Frame = 0
BLAST of Tan0005982 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Tan0005982 vs. TAIR 10
Match: AT4G26950.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 61/163 (37.42%), Postives = 77/163 (47.24%), Query Frame = 0
BLAST of Tan0005982 vs. TAIR 10
Match: AT4G26950.2 (Protein of unknown function, DUF584 ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 61/163 (37.42%), Postives = 77/163 (47.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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