
Tan0005913 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACGCAAACAGCGTGAGAAACCTTTTTATTTGATTCTTTAGTTTTTTAGAGGGAGACTTGGTAAAATTGAAGAGACTTTTGTTTTTTAAACGCTAATGGAAAAGCAGAGTCTGCAGCCGCCGCGGGAGAGAGTCGCCATCGCCGCCGTCGATGGCGAGGAGGAGGAGGATGAGGAGATGAAGATGGAGACGTTTTTTGCTCTGGTGAGGAATTTCAAGGAAATGCGTGATCGGCGAAGGAAGGAGTTGATGATCGGGTGCGACGCAGCGGATGCAGTGGAGGAGAATAAGAAGAGGAAGAAGATGAAGACTACTAGAGTGGAGAATCGGTCGACGTGGATTCCGAGGTTTGAGAGAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGGCGGTGGTGCTTCCGAAGCCTTGTAATCTTGTTAAGGAAGAGACGACGGCGACGGCAACGATGAAGAAGATCAAGACGACGAAAGTGAAGAGTGGAGAGGATTGTTTGGATCTAAATCTGGCTCTGTAGTTTTTTTTTTTTTTTTGCCAATTTGTAAAAAAGAATTTTATCAGAAAGAAAAGAATGAAAAAAGAGAATATCTAATTTTGGATGTTTTGTATTTTGGAAGGAAGACGAATGGGGTAACGTTTTAAGGCATTTATGTTCACGATCACGAGCCACACGATTTAATAAATCTAACAGATTTAAAATAAAATAATAGTTTAAAATCATACGTCAGTTTGCTTCAATTTTGAAAGTAT GAAAAACGCAAACAGCGTGAGAAACCTTTTTATTTGATTCTTTAGTTTTTTAGAGGGAGACTTGGTAAAATTGAAGAGACTTTTGTTTTTTAAACGCTAATGGAAAAGCAGAGTCTGCAGCCGCCGCGGGAGAGAGTCGCCATCGCCGCCGTCGATGGCGAGGAGGAGGAGGATGAGGAGATGAAGATGGAGACGTTTTTTGCTCTGGTGAGGAATTTCAAGGAAATGCGTGATCGGCGAAGGAAGGAGTTGATGATCGGGTGCGACGCAGCGGATGCAGTGGAGGAGAATAAGAAGAGGAAGAAGATGAAGACTACTAGAGTGGAGAATCGGTCGACGTGGATTCCGAGGTTTGAGAGAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGGCGGTGGTGCTTCCGAAGCCTTGTAATCTTGTTAAGGAAGAGACGACGGCGACGGCAACGATGAAGAAGATCAAGACGACGAAAGTGAAGAGTGGAGAGGATTGTTTGGATCTAAATCTGGCTCTGTAGTTTTTTTTTTTTTTTTGCCAATTTGTAAAAAAGAATTTTATCAGAAAGAAAAGAATGAAAAAAGAGAATATCTAATTTTGGATGTTTTGTATTTTGGAAGGAAGACGAATGGGGTAACGTTTTAAGGCATTTATGTTCACGATCACGAGCCACACGATTTAATAAATCTAACAGATTTAAAATAAAATAATAGTTTAAAATCATACGTCAGTTTGCTTCAATTTTGAAAGTAT ATGGAAAAGCAGAGTCTGCAGCCGCCGCGGGAGAGAGTCGCCATCGCCGCCGTCGATGGCGAGGAGGAGGAGGATGAGGAGATGAAGATGGAGACGTTTTTTGCTCTGGTGAGGAATTTCAAGGAAATGCGTGATCGGCGAAGGAAGGAGTTGATGATCGGGTGCGACGCAGCGGATGCAGTGGAGGAGAATAAGAAGAGGAAGAAGATGAAGACTACTAGAGTGGAGAATCGGTCGACGTGGATTCCGAGGTTTGAGAGAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGGCGGTGGTGCTTCCGAAGCCTTGTAATCTTGTTAAGGAAGAGACGACGGCGACGGCAACGATGAAGAAGATCAAGACGACGAAAGTGAAGAGTGGAGAGGATTGTTTGGATCTAAATCTGGCTCTGTAG MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL Homology
BLAST of Tan0005913 vs. ExPASy Swiss-Prot
Match: Q9FNZ5 (Protein NIM1-INTERACTING 1 OS=Arabidopsis thaliana OX=3702 GN=NIMIN-1 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.6e-04 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 0
BLAST of Tan0005913 vs. NCBI nr
Match: XP_023514605.1 (protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.9e-35 Identity = 94/141 (66.67%), Postives = 105/141 (74.47%), Query Frame = 0
BLAST of Tan0005913 vs. NCBI nr
Match: KAG7025612.1 (hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159.1 bits (401), Expect = 2.9e-35 Identity = 92/141 (65.25%), Postives = 103/141 (73.05%), Query Frame = 0
BLAST of Tan0005913 vs. NCBI nr
Match: XP_038898983.1 (protein NIM1-INTERACTING 1-like [Benincasa hispida]) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33 Identity = 97/148 (65.54%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of Tan0005913 vs. NCBI nr
Match: KAG6593261.1 (hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152.9 bits (385), Expect = 2.0e-33 Identity = 91/141 (64.54%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Tan0005913 vs. NCBI nr
Match: XP_022960173.1 (protein NIM1-INTERACTING 1 [Cucurbita moschata]) HSP 1 Score: 148.7 bits (374), Expect = 3.9e-32 Identity = 92/145 (63.45%), Postives = 101/145 (69.66%), Query Frame = 0
BLAST of Tan0005913 vs. ExPASy TrEMBL
Match: A0A6J1H831 (protein NIM1-INTERACTING 1 OS=Cucurbita moschata OX=3662 GN=LOC111460992 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.9e-32 Identity = 92/145 (63.45%), Postives = 101/145 (69.66%), Query Frame = 0
BLAST of Tan0005913 vs. ExPASy TrEMBL
Match: A0A6J1KR57 (protein NIM1-INTERACTING 1 OS=Cucurbita maxima OX=3661 GN=LOC111497915 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31 Identity = 88/141 (62.41%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of Tan0005913 vs. ExPASy TrEMBL
Match: A0A6J1JVD5 (uncharacterized protein LOC111488189 OS=Cucurbita maxima OX=3661 GN=LOC111488189 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 7.3e-29 Identity = 86/143 (60.14%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of Tan0005913 vs. ExPASy TrEMBL
Match: A0A6J1DAZ5 (protein NIM1-INTERACTING 1 OS=Momordica charantia OX=3673 GN=LOC111019022 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 7.3e-29 Identity = 85/144 (59.03%), Postives = 96/144 (66.67%), Query Frame = 0
BLAST of Tan0005913 vs. ExPASy TrEMBL
Match: A0A5A7UYI4 (Protein NIM1-INTERACTING 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00070 PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 8.7e-22 Identity = 82/150 (54.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Tan0005913 vs. TAIR 10
Match: AT1G02450.1 (NIM1-interacting 1 ) HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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