Tan0005896 (gene) Snake gourd v1

Overview


Name	Tan0005896
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Photosynthetic NDH subunit of subcomplex B 2
Location	LG10: 23678743 .. 23680788 (-)
RNA-Seq Expression	Tan0005896
Synteny	Tan0005896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCTGGTTTGCTTTCCTCTCCCCAAGCCCAACATCATAAGGGCCTCTTCTTCTTCTTCTTCTTCCCTCTCTCCTTCTGCAACTTCCCCTTTACCCGCCGACTCCCTCAACGACAAATTCGGCCGCAAGGGCATCCATTTCCACGACTCCAATGGCATTCCGGCCGTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCCACATTTCCGATGCTCATCTCACTTCCTACAGACCCAAAGTCTATTGGAAGGAGGACGGCTTCGAGGAAGTTCTCTTCACTACTCCCACCGCCAATGGCGGAAAAGGAGGGATTGGACTTGTGATTAACGACGCGTCCGATTCTGCCTCTAAACCCTCTCTTCTCCCTTCTTTTGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTATATATCATATGACTATATCTTTGACGAAATTTGGATTTTGCTTCTTTATTTGTATTCCTTGCTGAGTCGAATGAATCCATATTTCTTGTTTTCCCCCAAATTGTGTTGTGGGACTGCAGGAGCAGAAGCTACTAATTAATGATATAAGTTAGTGTACTGTGTTGTCTGCCTGGAATCTGAGCTCTATTTTGTATTTGATTTTGGTTGCACCCTTTAACGAATCCTTCCTTCAAATAAGTGTTCATTTGTCCACTTTCTACCACATTGAGACTCTACAATCATCTTGATCCCTGTTTGACGATTCTATACTTTTAGATGTATGACAGAATTTCTAATTTAAAAAATGTCTTTCGAACCTATATTGAACGGTCATTAGGATTTAGGAGGTACACAAAATTTGAATTAGCAATGAATGGTTATCGGGAAGTAGCTACATTGTGGCGGCCATATAATTTCTCCCTTAGGATTCATTTTATTGGTAATGATATAATCATTTACGTATTCATTGGTTAACTCCACAGGCTTTATAGTTTATACTAATTAGGATTTTGTTTTTACTTTTAACTTTTAGTCTTGTTCACTTTAGTACTAAGGAAGGGCTGAAAACCTCCCATCTTTTGTTAGGACAGAGTGCCAAGTTATGTAAGTTGATTGGGTTTGTATGTGGAGGTTTCATCTTGTTTCTCTGGCGTGGTTTTGTTGCAGGTGGAGTTAAGCTGCAGCAGCAAGCAAGTGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCAACGGCTGTGATCGTGAAGAACACGGGACAAAAGCCGTTGACGCTAAAGAGCGCGATACTGAGTCATTTCAAGTTCAAACGACGAGATGGGGCAGCAATCCAGGGACTGCAAGGATGTTCTTACTGCTCTCACCCACCTCTATCTTCCCCTTTCGAAATACTATCTCCATCAGAAGCAATGAAGGCGGAGGACCCCGATTGGTTCTCGTTCGGCTCCGAGCCTCAAGAAAAGGCAGGCTCATGGAGCCTCCAAGATGTGCCCTTCACCATATTGAAGAACAAGTTCAGCAGAGTTTATGCCGCTCCACCAGCAGAGAGATTGAAGCCAGTCTTTCACACCACACCATCAAAGTATGAGACTCTTGATCAGGTAAAAAAATGCCTACTTCATTGTTTCACTCACACCTTCAAGTTTGGTATTTAACATGGCTAAAAACACTTTCGATGAAGTAACATAAAAGTGCTTTGTGAGAAAGGACATCTAGAGTGTTTTTGCTCAAAGTTTTTGTTTTAGTCCAAATACTTTGTTTTAGCACACAAAGTGCTTTGATGAAGTAGCATAAAAATGCTTTTAATCAAAGTACTTAGTTTAAAAGCACTCGGAAAACACACTAATACTTGTTGGGTCTGTGTATTTCAGGGGCGAGAGCTATTCTTCAGGGTGATAAGGATGGGGTTCGAAGACATTTACATATCAAGCCCTGGTTCATTATCTGACAAGTACGGCAAAGACTACTTCATATGCACTGGCCCTGCTTCCATTTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTTATTGAGCATGATAACTTGTGA

mRNA sequence

ATGGCTTCTCTGGTTTGCTTTCCTCTCCCCAAGCCCAACATCATAAGGGCCTCTTCTTCTTCTTCTTCTTCCCTCTCTCCTTCTGCAACTTCCCCTTTACCCGCCGACTCCCTCAACGACAAATTCGGCCGCAAGGGCATCCATTTCCACGACTCCAATGGCATTCCGGCCGTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCCACATTTCCGATGCTCATCTCACTTCCTACAGACCCAAAGTCTATTGGAAGGAGGACGGCTTCGAGGAAGTTCTCTTCACTACTCCCACCGCCAATGGCGGAAAAGGAGGGATTGGACTTGTGATTAACGACGCGTCCGATTCTGCCTCTAAACCCTCTCTTCTCCCTTCTTTTGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTGGAGTTAAGCTGCAGCAGCAAGCAAGTGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCAACGGCTGTGATCGTGAAGAACACGGGACAAAAGCCGTTGACGCTAAAGAGCGCGATACTGAGTCATTTCAAGTTCAAACGACGAGATGGGGCAGCAATCCAGGGACTGCAAGGATGTTCTTACTGCTCTCACCCACCTCTATCTTCCCCTTTCGAAATACTATCTCCATCAGAAGCAATGAAGGCGGAGGACCCCGATTGGTTCTCGTTCGGCTCCGAGCCTCAAGAAAAGGCAGGCTCATGGAGCCTCCAAGATGTGCCCTTCACCATATTGAAGAACAAGTTCAGCAGAGTTTATGCCGCTCCACCAGCAGAGAGATTGAAGCCAGTCTTTCACACCACACCATCAAAGTATGAGACTCTTGATCAGGGGCGAGAGCTATTCTTCAGGGTGATAAGGATGGGGTTCGAAGACATTTACATATCAAGCCCTGGTTCATTATCTGACAAGTACGGCAAAGACTACTTCATATGCACTGGCCCTGCTTCCATTTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTTATTGAGCATGATAACTTGTGA

Coding sequence (CDS)

ATGGCTTCTCTGGTTTGCTTTCCTCTCCCCAAGCCCAACATCATAAGGGCCTCTTCTTCTTCTTCTTCTTCCCTCTCTCCTTCTGCAACTTCCCCTTTACCCGCCGACTCCCTCAACGACAAATTCGGCCGCAAGGGCATCCATTTCCACGACTCCAATGGCATTCCGGCCGTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCCACATTTCCGATGCTCATCTCACTTCCTACAGACCCAAAGTCTATTGGAAGGAGGACGGCTTCGAGGAAGTTCTCTTCACTACTCCCACCGCCAATGGCGGAAAAGGAGGGATTGGACTTGTGATTAACGACGCGTCCGATTCTGCCTCTAAACCCTCTCTTCTCCCTTCTTTTGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTGGAGTTAAGCTGCAGCAGCAAGCAAGTGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCAACGGCTGTGATCGTGAAGAACACGGGACAAAAGCCGTTGACGCTAAAGAGCGCGATACTGAGTCATTTCAAGTTCAAACGACGAGATGGGGCAGCAATCCAGGGACTGCAAGGATGTTCTTACTGCTCTCACCCACCTCTATCTTCCCCTTTCGAAATACTATCTCCATCAGAAGCAATGAAGGCGGAGGACCCCGATTGGTTCTCGTTCGGCTCCGAGCCTCAAGAAAAGGCAGGCTCATGGAGCCTCCAAGATGTGCCCTTCACCATATTGAAGAACAAGTTCAGCAGAGTTTATGCCGCTCCACCAGCAGAGAGATTGAAGCCAGTCTTTCACACCACACCATCAAAGTATGAGACTCTTGATCAGGGGCGAGAGCTATTCTTCAGGGTGATAAGGATGGGGTTCGAAGACATTTACATATCAAGCCCTGGTTCATTATCTGACAAGTACGGCAAAGACTACTTCATATGCACTGGCCCTGCTTCCATTTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTTATTGAGCATGATAACTTGTGA

Protein sequence

MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDLTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSASKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL

Homology

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BLAST of Tan0005896 vs. ExPASy Swiss-Prot
Match: Q94AQ8 (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB2 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 3.1e-121
Identity = 215/357 (60.22%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 1   MASLVCFP-LPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVD 60
           MASL+ F  LPKP  +R      SS+S   T  +  + L DKFGRKGI F +SN IP V+
Sbjct: 1   MASLISFSLLPKPKAVR------SSISAPQTQTINTEKLEDKFGRKGIKFSESNNIPMVE 60

Query: 61  LTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSA 120
           L VRNGSSL+L +SDAH+ SY+PKVYWK++GFEEVL+T    +  +GG+G+VI +  +  
Sbjct: 61  LKVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTV-DGDESRGGVGVVIVNGEEPK 120

Query: 121 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQK 180
              S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G+K
Sbjct: 121 GGSSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRK 180

Query: 181 PLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFG 240
           P+TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSPSEAMKAE   W  FG
Sbjct: 181 PVTLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGW--FG 240

Query: 241 SEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRV 300
           SE  EK G W+++D   T+L+ K SR+Y APPAERLK V++T PSK+ET+DQGR LFFR+
Sbjct: 241 SEEGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQGRGLFFRM 300

Query: 301 IRMGFEDIYISSPGSLSDKYGKD-YFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           IR+GFE++Y+ SPGS+ DKYGK  YF+CTGP S+LVPV V  GE WRGA VIEHDNL
Sbjct: 301 IRIGFEEMYVGSPGSMWDKYGKQHYFVCTGPTSMLVPVDVASGETWRGAMVIEHDNL 348

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BLAST of Tan0005896 vs. ExPASy Swiss-Prot
Match: Q9C503 (Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana OX=3702 GN=NDF5 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.3e-26
Identity = 91/359 (25.35%), Postives = 158/359 (44.01%), Query Frame = 0


Query: 13  NIIRASSS--SSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDLTVRNGSSLRL 72
           NI R  SS   S+S S S   P+  + L  +F   G  F D        L + NGSS  +
Sbjct: 38  NIKRLESSVPPSASASASPAFPIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANV 97

Query: 73  HISDAHLTSYRPKVY----------WKEDGFEEVLFTTPTANGGKGGIGLVINDA-SDSA 132
            ++   +TSY+ +V+          W E   EEV+         +GG+      + SD  
Sbjct: 98  MLTRGMITSYKVRVWHGGKVELLHTWVEQEEEEVVI--------RGGVSSAFRSSDSDEI 157

Query: 133 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSS---KQVEITYIVTLYSESMATAVIVKNT 192
           S        DW ++ +  D+ D +Q+EL  S    K++E+  I++L   +++  + + N 
Sbjct: 158 S--------DWRLQGISGDSKDCVQMELRRSDKKIKEIELKQIISLRENTLSIELSMTNK 217

Query: 193 GQKPLTLKS-AILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDW 252
           G  P+ L+  +++S+      +     GL+G  +    P    F ++             
Sbjct: 218 GISPIKLEGCSLVSYLTVSTPEATYAVGLEGSDFVETTPFLPRFGVVQ------------ 277

Query: 253 FSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGREL 312
              G + +EK G    ++  +  L  + SR+Y               P  +  +D+GR  
Sbjct: 278 ---GEKEEEKPGFGGEEESNYKQLNREMSRIYTC------------APKSFTVIDRGRRN 337

Query: 313 FFRVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDN 355
              V R GFE++Y+ SPGS  + Y K  ++C GP+S+L P++++ G  WRG   + + N
Sbjct: 338 SVVVGREGFEEVYMYSPGSRLESYTKSAYVCIGPSSLLSPISLESGCVWRGVLHLHNPN 353

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BLAST of Tan0005896 vs. ExPASy Swiss-Prot
Match: Q40784 (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 24/76 (31.58%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 278 VFHTTPSKYETLDQGRELFFRVIRMGFEDIYISSPGSLSDKYGKDY-------FICTGPA 337
           V+   PSK   +D  ++  F V + G  D  + +P     K  +D+        +C  PA
Sbjct: 230 VYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPA 289

Query: 338 SILVPVTVKPGEQWRG 347
           ++  P+T+KPGE+WRG
Sbjct: 290 AVEKPITLKPGEEWRG 305

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BLAST of Tan0005896 vs. NCBI nr
Match: XP_022932774.1 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 666.0 bits (1717), Expect = 1.8e-187
Identity = 327/355 (92.11%), Postives = 342/355 (96.34%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPK +I+RASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFH SNGIP VDL
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHQSNGIPTVDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRLHISDAH+ SY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVINDAS+SAS
Sbjct: 61  TVRNGSSLRLHISDAHIPSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVINDASNSAS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           KPSLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIVKNTG K 
Sbjct: 121 KPSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGPKL 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDPDWFSFGS
Sbjct: 181 LSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDPDWFSFGS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 RMGFEDIYVQSPGSLSDKFGKDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 355

[Close]

BLAST of Tan0005896 vs. NCBI nr
Match: XP_023540761.1 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 660.6 bits (1703), Expect = 7.6e-186
Identity = 324/355 (91.27%), Postives = 340/355 (95.77%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPK +I+RASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFH SNGIP VDL
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHQSNGIPTVDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRLHISDAH+ SY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVINDAS+SAS
Sbjct: 61  TVRNGSSLRLHISDAHIPSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVINDASNSAS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           KPSLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIVKNTG K 
Sbjct: 121 KPSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGPKL 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDPDWFSF S
Sbjct: 181 LSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDPDWFSFSS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQEK GSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQEKVGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTV+PGEQWRGAQVIEHDNL
Sbjct: 301 RMGFEDIYVQSPGSLSDKFGKDYFICTGPASMLVPVTVEPGEQWRGAQVIEHDNL 355

[Close]

BLAST of Tan0005896 vs. NCBI nr
Match: XP_022972247.1 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 659.4 bits (1700), Expect = 1.7e-185
Identity = 327/358 (91.34%), Postives = 342/358 (95.53%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSS---SSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPA 60
           MASLVC PLPK +I+RASSSS   SSSLSPSATSPLPADSLNDKFGRKGIHFH SNGIP 
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSFSSSLSPSATSPLPADSLNDKFGRKGIHFHQSNGIPT 60

Query: 61  VDLTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASD 120
           VDLTVRNGSSLRLHISDAH+TSY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVINDAS+
Sbjct: 61  VDLTVRNGSSLRLHISDAHITSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVINDASN 120

Query: 121 SASKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTG 180
           SASK SLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIVKNTG
Sbjct: 121 SASKSSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTG 180

Query: 181 QKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFS 240
            K L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDPDWFS
Sbjct: 181 PKLLSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDPDWFS 240

Query: 241 FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFF 300
           FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGRELFF
Sbjct: 241 FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGRELFF 300

Query: 301 RVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RVIRMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 RVIRMGFEDIYLQSPGSLSDKFGKDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 358

[Close]

BLAST of Tan0005896 vs. NCBI nr
Match: KAG7029153.1 (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 659.1 bits (1699), Expect = 2.2e-185
Identity = 327/362 (90.33%), Postives = 342/362 (94.48%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRA-------SSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSN 60
           MASLVC PLPK +I+RA       SSSSSSSLSPSATSPLPADSLNDKFGRKGIHFH SN
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSSSSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHQSN 60

Query: 61  GIPAVDLTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVIN 120
           GIP VDLTVRNGSSLRLHISDAH+ SY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVIN
Sbjct: 61  GIPTVDLTVRNGSSLRLHISDAHIPSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVIN 120

Query: 121 DASDSASKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIV 180
           DAS+SASKPSLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIV
Sbjct: 121 DASNSASKPSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIV 180

Query: 181 KNTGQKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDP 240
           KNTG K L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDP
Sbjct: 181 KNTGPKLLSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDP 240

Query: 241 DWFSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGR 300
           DWFSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGR
Sbjct: 241 DWFSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGR 300

Query: 301 ELFFRVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHD 356
           ELFFRVIRMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTVKPGEQWRGAQVIEHD
Sbjct: 301 ELFFRVIRMGFEDIYVQSPGSLSDKFGKDYFICTGPASMLVPVTVKPGEQWRGAQVIEHD 360

[Close]

BLAST of Tan0005896 vs. NCBI nr
Match: KAG6597706.1 (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184
Identity = 325/362 (89.78%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRA-------SSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSN 60
           MASLVC PLPK +I+RA       SSSSSSSLSPSATSPLPADSLNDKFGRKGIHFH SN
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSSSSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHQSN 60

Query: 61  GIPAVDLTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVIN 120
           GIP VDLTVRNGSSLRLHISDAH+ SY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVIN
Sbjct: 61  GIPTVDLTVRNGSSLRLHISDAHIPSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVIN 120

Query: 121 DASDSASKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIV 180
           DAS+SASKPSLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIV
Sbjct: 121 DASNSASKPSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIV 180

Query: 181 KNTGQKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDP 240
           KNTG K L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDP
Sbjct: 181 KNTGPKLLSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDP 240

Query: 241 DWFSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGR 300
           DWFSFGSEPQEKAGSW LQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGR
Sbjct: 241 DWFSFGSEPQEKAGSWCLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGR 300

Query: 301 ELFFRVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHD 356
           ELFFRVIRMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVP+TVKPGEQWRGAQVIEHD
Sbjct: 301 ELFFRVIRMGFEDIYVQSPGSLSDKFGKDYFICTGPASMLVPITVKPGEQWRGAQVIEHD 360

[Close]

BLAST of Tan0005896 vs. ExPASy TrEMBL
Match: A0A6J1EXZ1 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439223 PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 8.8e-188
Identity = 327/355 (92.11%), Postives = 342/355 (96.34%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPK +I+RASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFH SNGIP VDL
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHQSNGIPTVDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRLHISDAH+ SY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVINDAS+SAS
Sbjct: 61  TVRNGSSLRLHISDAHIPSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVINDASNSAS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           KPSLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIVKNTG K 
Sbjct: 121 KPSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGPKL 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDPDWFSFGS
Sbjct: 181 LSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDPDWFSFGS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 RMGFEDIYVQSPGSLSDKFGKDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 355

[Close]

BLAST of Tan0005896 vs. ExPASy TrEMBL
Match: A0A6J1I4B2 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470832 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 8.2e-186
Identity = 327/358 (91.34%), Postives = 342/358 (95.53%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSS---SSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPA 60
           MASLVC PLPK +I+RASSSS   SSSLSPSATSPLPADSLNDKFGRKGIHFH SNGIP 
Sbjct: 1   MASLVCLPLPKLSIVRASSSSSSFSSSLSPSATSPLPADSLNDKFGRKGIHFHQSNGIPT 60

Query: 61  VDLTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASD 120
           VDLTVRNGSSLRLHISDAH+TSY+PKVYWK+DGFEEVLFTTP ANGGKGGIGLVINDAS+
Sbjct: 61  VDLTVRNGSSLRLHISDAHITSYKPKVYWKDDGFEEVLFTTPAANGGKGGIGLVINDASN 120

Query: 121 SASKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTG 180
           SASK SLLP+ DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSESMATAVIVKNTG
Sbjct: 121 SASKSSLLPTSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTG 180

Query: 181 QKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFS 240
            K L+L SAILSHFKFKRRDGAAIQGL+GCSYCS PPLSSPFEILSP+EAMKAEDPDWFS
Sbjct: 181 PKLLSLNSAILSHFKFKRRDGAAIQGLEGCSYCSLPPLSSPFEILSPTEAMKAEDPDWFS 240

Query: 241 FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFF 300
           FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAER KPV+HTTPSKYETLDQGRELFF
Sbjct: 241 FGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERSKPVYHTTPSKYETLDQGRELFF 300

Query: 301 RVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RVIRMGFEDIY+ SPGSLSDK+GKDYFICTGPAS+LVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 RVIRMGFEDIYLQSPGSLSDKFGKDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 358

[Close]

BLAST of Tan0005896 vs. ExPASy TrEMBL
Match: A0A1S3CQ42 (photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502972 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.8e-178
Identity = 312/355 (87.89%), Postives = 334/355 (94.08%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPKPN+IRASSSSSS+  PS      ADSLNDKF RKG HFHDSNG+P +DL
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSTSFPST-----ADSLNDKFARKGFHFHDSNGVPTLDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRLHISDAHLTSY+PKVYWK+DGFEE+LFTTPTA   KGGI LVI+DASDS+S
Sbjct: 61  TVRNGSSLRLHISDAHLTSYKPKVYWKDDGFEEILFTTPTA---KGGIALVIDDASDSSS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           K SLLPS DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSES+ATAVIVKNTG KP
Sbjct: 121 KSSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKP 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           LTLKSAILSHFKFK+RDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMK E+PDWFSFGS
Sbjct: 181 LTLKSAILSHFKFKQRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEEPDWFSFGS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQ KAGSWSLQDVPFT+LKNKFSRVYAAPPAERLKP++HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RMGFEDIY+SSPGSLS+K+GKD+FICTGPAS+LVPVTVKPGEQW+GAQVIEHDNL
Sbjct: 301 RMGFEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWKGAQVIEHDNL 347

[Close]

BLAST of Tan0005896 vs. ExPASy TrEMBL
Match: A0A0A0LCL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843790 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.2e-178
Identity = 314/355 (88.45%), Postives = 332/355 (93.52%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPKPN+IRASSSSSSS S     P   DSLNDKFGRKG HFHDSNG+P +DL
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSSTS----FPSTVDSLNDKFGRKGFHFHDSNGVPTLDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRL ISDAHLTSY+PKVYWK+DGFEEVLFTTPTA   KGGI LVI+DASDS+S
Sbjct: 61  TVRNGSSLRLRISDAHLTSYKPKVYWKDDGFEEVLFTTPTA---KGGIALVIDDASDSSS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           K SLLPS DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSES+ATAVIVKNTG KP
Sbjct: 121 KSSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKP 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMK E+ DWFSFGS
Sbjct: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEESDWFSFGS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQ KAGSWSLQDVPFT+LKNKFSRVYAAPPAERLKP++HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           RMGFEDIY+SSPGSLS+K+GKD+FICTGPAS+LVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 RMGFEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 348

[Close]

BLAST of Tan0005896 vs. ExPASy TrEMBL
Match: A0A5A7U7W3 (Photosynthetic NDH subunit of subcomplex B 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00100 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 9.4e-174
Identity = 305/348 (87.64%), Postives = 327/348 (93.97%), Query Frame = 0


Query: 1   MASLVCFPLPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDL 60
           MASLVC PLPKPN+IRASSSSSS+  PS      ADSLNDKF RKG HFHDSNG+P +DL
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSTSFPST-----ADSLNDKFARKGFHFHDSNGVPTLDL 60

Query: 61  TVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSAS 120
           TVRNGSSLRLHISDAHLTSY+PKVYWK+DGFEE+LFTTPTA   KGGI LVI+DASDS+S
Sbjct: 61  TVRNGSSLRLHISDAHLTSYKPKVYWKDDGFEEILFTTPTA---KGGIALVIDDASDSSS 120

Query: 121 KPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQKP 180
           K SLLPS DWTVKDVDSDAIDALQVELSCSSKQ+EITYIVTLYSES+ATAVIVKNTG KP
Sbjct: 121 KSSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKP 180

Query: 181 LTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFGS 240
           LTLKSAILSHFKFK+RDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMK E+PDWFSFGS
Sbjct: 181 LTLKSAILSHFKFKQRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEEPDWFSFGS 240

Query: 241 EPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRVI 300
           EPQ KAGSWSLQDVPFT+LKNKFSRVYAAPPAERLKP++HTTPSKYETLDQGRELFFRVI
Sbjct: 241 EPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVI 300

Query: 301 RMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQ 349
           RMGFEDIY+SSPGSLS+K+GKD+FICTGPAS+LVPVTVKPGEQW+GAQ
Sbjct: 301 RMGFEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWKGAQ 340

[Close]

BLAST of Tan0005896 vs. TAIR 10
Match: AT1G64770.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 436.4 bits (1121), Expect = 2.2e-122
Identity = 215/357 (60.22%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 1   MASLVCFP-LPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVD 60
           MASL+ F  LPKP  +R      SS+S   T  +  + L DKFGRKGI F +SN IP V+
Sbjct: 1   MASLISFSLLPKPKAVR------SSISAPQTQTINTEKLEDKFGRKGIKFSESNNIPMVE 60

Query: 61  LTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSA 120
           L VRNGSSL+L +SDAH+ SY+PKVYWK++GFEEVL+T    +  +GG+G+VI +  +  
Sbjct: 61  LKVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTV-DGDESRGGVGVVIVNGEEPK 120

Query: 121 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQK 180
              S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G+K
Sbjct: 121 GGSSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRK 180

Query: 181 PLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFG 240
           P+TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSPSEAMKAE   W  FG
Sbjct: 181 PVTLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGW--FG 240

Query: 241 SEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRELFFRV 300
           SE  EK G W+++D   T+L+ K SR+Y APPAERLK V++T PSK+ET+DQGR LFFR+
Sbjct: 241 SEEGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQGRGLFFRM 300

Query: 301 IRMGFEDIYISSPGSLSDKYGKD-YFICTGPASILVPVTVKPGEQWRGAQVIEHDNL 356
           IR+GFE++Y+ SPGS+ DKYGK  YF+CTGP S+LVPV V  GE WRGA VIEHDNL
Sbjct: 301 IRIGFEEMYVGSPGSMWDKYGKQHYFVCTGPTSMLVPVDVASGETWRGAMVIEHDNL 348

[Close]

BLAST of Tan0005896 vs. TAIR 10
Match: AT1G64770.3 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-92
Identity = 169/295 (57.29%), Postives = 221/295 (74.92%), Query Frame = 0


Query: 1   MASLVCFP-LPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVD 60
           MASL+ F  LPKP  +R      SS+S   T  +  + L DKFGRKGI F +SN IP V+
Sbjct: 1   MASLISFSLLPKPKAVR------SSISAPQTQTINTEKLEDKFGRKGIKFSESNNIPMVE 60

Query: 61  LTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSA 120
           L VRNGSSL+L +SDAH+ SY+PKVYWK++GFEEVL+T    +  +GG+G+VI +  +  
Sbjct: 61  LKVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTV-DGDESRGGVGVVIVNGEEPK 120

Query: 121 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQK 180
              S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G+K
Sbjct: 121 GGSSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRK 180

Query: 181 PLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFG 240
           P+TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSPSEAMKAE   W  FG
Sbjct: 181 PVTLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGW--FG 240

Query: 241 SEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGRE 295
           SE  EK G W+++D   T+L+ K SR+Y APPAERLK V++T PSK+ET+DQ ++
Sbjct: 241 SEEGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQKKK 286

[Close]

BLAST of Tan0005896 vs. TAIR 10
Match: AT1G64770.2 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 336.7 bits (862), Expect = 2.3e-92
Identity = 169/292 (57.88%), Postives = 219/292 (75.00%), Query Frame = 0


Query: 1   MASLVCFP-LPKPNIIRASSSSSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVD 60
           MASL+ F  LPKP  +R      SS+S   T  +  + L DKFGRKGI F +SN IP V+
Sbjct: 1   MASLISFSLLPKPKAVR------SSISAPQTQTINTEKLEDKFGRKGIKFSESNNIPMVE 60

Query: 61  LTVRNGSSLRLHISDAHLTSYRPKVYWKEDGFEEVLFTTPTANGGKGGIGLVINDASDSA 120
           L VRNGSSL+L +SDAH+ SY+PKVYWK++GFEEVL+T    +  +GG+G+VI +  +  
Sbjct: 61  LKVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTV-DGDESRGGVGVVIVNGEEPK 120

Query: 121 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSSKQVEITYIVTLYSESMATAVIVKNTGQK 180
              S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G+K
Sbjct: 121 GGSSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRK 180

Query: 181 PLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDWFSFG 240
           P+TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSPSEAMKAE   W  FG
Sbjct: 181 PVTLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGW--FG 240

Query: 241 SEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQ 292
           SE  EK G W+++D   T+L+ K SR+Y APPAERLK V++T PSK+ET+DQ
Sbjct: 241 SEEGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQ 283

[Close]

BLAST of Tan0005896 vs. TAIR 10
Match: AT1G55370.2 (NDH-dependent cyclic electron flow 5 )

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-27
Identity = 91/359 (25.35%), Postives = 158/359 (44.01%), Query Frame = 0


Query: 13  NIIRASSS--SSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDLTVRNGSSLRL 72
           NI R  SS   S+S S S   P+  + L  +F   G  F D        L + NGSS  +
Sbjct: 38  NIKRLESSVPPSASASASPAFPIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANV 97

Query: 73  HISDAHLTSYRPKVY----------WKEDGFEEVLFTTPTANGGKGGIGLVINDA-SDSA 132
            ++   +TSY+ +V+          W E   EEV+         +GG+      + SD  
Sbjct: 98  MLTRGMITSYKVRVWHGGKVELLHTWVEQEEEEVVI--------RGGVSSAFRSSDSDEI 157

Query: 133 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSS---KQVEITYIVTLYSESMATAVIVKNT 192
           S        DW ++ +  D+ D +Q+EL  S    K++E+  I++L   +++  + + N 
Sbjct: 158 S--------DWRLQGISGDSKDCVQMELRRSDKKIKEIELKQIISLRENTLSIELSMTNK 217

Query: 193 GQKPLTLKS-AILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDW 252
           G  P+ L+  +++S+      +     GL+G  +    P    F ++             
Sbjct: 218 GISPIKLEGCSLVSYLTVSTPEATYAVGLEGSDFVETTPFLPRFGVVQ------------ 277

Query: 253 FSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPPAERLKPVFHTTPSKYETLDQGREL 312
              G + +EK G    ++  +  L  + SR+Y               P  +  +D+GR  
Sbjct: 278 ---GEKEEEKPGFGGEEESNYKQLNREMSRIYTC------------APKSFTVIDRGRRN 337

Query: 313 FFRVIRMGFEDIYISSPGSLSDKYGKDYFICTGPASILVPVTVKPGEQWRGAQVIEHDN 355
              V R GFE++Y+ SPGS  + Y K  ++C GP+S+L P++++ G  WRG   + + N
Sbjct: 338 SVVVGREGFEEVYMYSPGSRLESYTKSAYVCIGPSSLLSPISLESGCVWRGVLHLHNPN 353

[Close]

BLAST of Tan0005896 vs. TAIR 10
Match: AT1G55370.1 (NDH-dependent cyclic electron flow 5 )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 65/276 (23.55%), Postives = 115/276 (41.67%), Query Frame = 0


Query: 13  NIIRASSS--SSSSLSPSATSPLPADSLNDKFGRKGIHFHDSNGIPAVDLTVRNGSSLRL 72
           NI R  SS   S+S S S   P+  + L  +F   G  F D        L + NGSS  +
Sbjct: 38  NIKRLESSVPPSASASASPAFPIDVEYLRREFSGHGATFEDIGETCIARLKLDNGSSANV 97

Query: 73  HISDAHLTSYRPKVY----------WKEDGFEEVLFTTPTANGGKGGIGLVINDA-SDSA 132
            ++   +TSY+ +V+          W E   EEV+         +GG+      + SD  
Sbjct: 98  MLTRGMITSYKVRVWHGGKVELLHTWVEQEEEEVVI--------RGGVSSAFRSSDSDEI 157

Query: 133 SKPSLLPSFDWTVKDVDSDAIDALQVELSCSS---KQVEITYIVTLYSESMATAVIVKNT 192
           S        DW ++ +  D+ D +Q+EL  S    K++E+  I++L   +++  + + N 
Sbjct: 158 S--------DWRLQGISGDSKDCVQMELRRSDKKIKEIELKQIISLRENTLSIELSMTNK 217

Query: 193 GQKPLTLKS-AILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKAEDPDW 252
           G  P+ L+  +++S+      +     GL+G  +    P    F ++             
Sbjct: 218 GISPIKLEGCSLVSYLTVSTPEATYAVGLEGSDFVETTPFLPRFGVVQ------------ 277

Query: 253 FSFGSEPQEKAGSWSLQDVPFTILKNKFSRVYAAPP 272
              G + +EK G    ++  +  L  + SR+Y   P
Sbjct: 278 ---GEKEEEKPGFGGEEESNYKQLNREMSRIYTCAP 282

The following BLAST results are available for this feature:

BLAST of Tan0005896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AQ8	3.1e-121	60.22	Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thali...	[more]
Q9C503	6.3e-26	25.35	Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q40784	1.6e-05	31.58	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1	[more]

BLAST of Tan0005896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932774.1	1.8e-187	92.11	photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita moschata]	[more]
XP_023540761.1	7.6e-186	91.27	photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita pepo subs...	[more]
XP_022972247.1	1.7e-185	91.34	photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita maxima]	[more]
KAG7029153.1	2.2e-185	90.33	Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, partial [Cucurbita ...	[more]
KAG6597706.1	1.1e-184	89.78	Photosynthetic NDH subunit of subcomplex B 2, chloroplastic, partial [Cucurbita ...	[more]

BLAST of Tan0005896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXZ1	8.8e-188	92.11	photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1I4B2	8.2e-186	91.34	photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucurbita maxima ...	[more]
A0A1S3CQ42	2.8e-178	87.89	photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Cucumis melo OX=3...	[more]
A0A0A0LCL5	8.2e-178	88.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G843790 PE=4 SV=1	[more]
A0A5A7U7W3	9.4e-174	87.64	Photosynthetic NDH subunit of subcomplex B 2 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Tan0005896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64770.1	2.2e-122	60.22	NDH-dependent cyclic electron flow 1	[more]
AT1G64770.3	1.8e-92	57.29	NDH-dependent cyclic electron flow 1	[more]
AT1G64770.2	2.3e-92	57.88	NDH-dependent cyclic electron flow 1	[more]
AT1G55370.2	4.5e-27	25.35	NDH-dependent cyclic electron flow 5	[more]
AT1G55370.1	1.2e-11	23.55	NDH-dependent cyclic electron flow 5	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 56..355 e-value: 1.7E-25 score: 91.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..37
None	No IPR available	PANTHER	PTHR11122:SF18	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC	coord: 20..355
None	No IPR available	PANTHER	PTHR11122	APOSPORY-ASSOCIATED PROTEIN C-RELATED	coord: 20..355
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 47..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005896.1	Tan0005896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0097552	mitochondrial double-strand break repair via homologous recombination
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0000723	telomere maintenance
cellular_component	GO:0035861	site of double-strand break
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0008296	3'-5'-exodeoxyribonuclease activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0047938	glucose-6-phosphate 1-epimerase activity
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0000014	single-stranded DNA endodeoxyribonuclease activity
molecular_function	GO:0003824	catalytic activity