Tan0005787 (gene) Snake gourd v1

Overview
NameTan0005787
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description(thale cress) hypothetical protein
LocationLG07: 3713646 .. 3714388 (+)
RNA-Seq ExpressionTan0005787
SyntenyTan0005787
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAATCCCAACGCTTCAAGAAACCTCTCGGAATTTGGAATTCCCCCCTCCTTTATAAACCAAATCTCTTCATCAAATTCCTCACCACCAATCCAAGAATCAACAAACAACAAACAACAAGAAGCAAAGAATTGTTCAATCGAATCGAAGAAGATGAATTCTATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTGATCCTCGGCAAATTCGTTAGGGCTTCTTCTTCTGTCCCTTCCTTCACTCCTAACAACGGCGGCGCTGTCTCTTCTGATTCTCTGAAGTCGCCGCCGATCAGCAAGAAGGGCGAACCTAACTCCAAGAATTCGTCCATGAGGCCCAGATTTGCTCTGGAGTTCGATGGCCTCAATTGCTTTGAGACTCTCGTCCCGAATTGACGTCTCTCACTACTTTTATCGCTTTCTACCTAACTGATTCTTTTGATTCTTTCGTTTAAATTAGGGCTTTCTTGGAGAATACAGAGTGCTCTTTTTTTGTTCGCGTTTATGTTACACGGAATTAGACGATTGATTGTGTTCTGCGTTTCGTTGGAATTTGATATATGGAATGAAAAACACACAACTCGTTGATTCGTTACTCTTTGTTCTTCTTCTTCTTCTTCTTCTTCCTTGATTTTCTTGTTCCTTCTCGTTCTCTTTCCCGTTCCTTATTTATTTATTTGTTTTCTCCTCCTTATATGGAATTATCGTAATCGAGAATTTGAAAACTCTGAAATCTCAA

mRNA sequence

ATTAAATCCCAACGCTTCAAGAAACCTCTCGGAATTTGGAATTCCCCCCTCCTTTATAAACCAAATCTCTTCATCAAATTCCTCACCACCAATCCAAGAATCAACAAACAACAAACAACAAGAAGCAAAGAATTGTTCAATCGAATCGAAGAAGATGAATTCTATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTGATCCTCGGCAAATTCGTTAGGGCTTCTTCTTCTGTCCCTTCCTTCACTCCTAACAACGGCGGCGCTGTCTCTTCTGATTCTCTGAAGTCGCCGCCGATCAGCAAGAAGGGCGAACCTAACTCCAAGAATTCGTCCATGAGGCCCAGATTTGCTCTGGAGTTCGATGGCCTCAATTGCTTTGAGACTCTCGTCCCGAATTGACGTCTCTCACTACTTTTATCGCTTTCTACCTAACTGATTCTTTTGATTCTTTCGTTTAAATTAGGGCTTTCTTGGAGAATACAGAGTGCTCTTTTTTTGTTCGCGTTTATGTTACACGGAATTAGACGATTGATTGTGTTCTGCGTTTCGTTGGAATTTGATATATGGAATGAAAAACACACAACTCGTTGATTCGTTACTCTTTGTTCTTCTTCTTCTTCTTCTTCTTCCTTGATTTTCTTGTTCCTTCTCGTTCTCTTTCCCGTTCCTTATTTATTTATTTGTTTTCTCCTCCTTATATGGAATTATCGTAATCGAGAATTTGAAAACTCTGAAATCTCAA

Coding sequence (CDS)

ATGAATTCTATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTGATCCTCGGCAAATTCGTTAGGGCTTCTTCTTCTGTCCCTTCCTTCACTCCTAACAACGGCGGCGCTGTCTCTTCTGATTCTCTGAAGTCGCCGCCGATCAGCAAGAAGGGCGAACCTAACTCCAAGAATTCGTCCATGAGGCCCAGATTTGCTCTGGAGTTCGATGGCCTCAATTGCTTTGAGACTCTCGTCCCGAATTGA

Protein sequence

MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNNGGAVSSDSLKSPPISKKGEPNSKNSSMRPRFALEFDGLNCFETLVPN
Homology
BLAST of Tan0005787 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-21
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNNGGAVSSDSLKSP-PISKKGEPNSKNS 60
          MNSMFSLFDAFAAE +LG FVRASSSVPSFTPNN  A  S ++  P P  K+ EP SKNS
Sbjct: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPNNNNA--SPAVPKPLPSKKEEEPKSKNS 60

Query: 61 SMRPRFALEFDGLNCFETLVPN 82
           M+PRFALE DGLNCFETLVPN
Sbjct: 61 LMKPRFALELDGLNCFETLVPN 80

BLAST of Tan0005787 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPN--NGGAVSSDSLKSPPISKKGEPN--- 60
          MNSMFS FDAFAAE+++GKFV AS+SVPSFTPN   GG+ SS  +KS P  KK E N   
Sbjct: 1  MNSMFSFFDAFAAEILIGKFVTASTSVPSFTPNTGGGGSASSAPVKSMP-GKKDEANAVA 60

Query: 61 -SKNSSMRPRFALEFDGLNCFETLVPN 82
           SKNSSM+PRFALE DGLNCFETLVPN
Sbjct: 61 KSKNSSMKPRFALELDGLNCFETLVPN 86

BLAST of Tan0005787 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20
Identity = 61/84 (72.62%), Postives = 65/84 (77.38%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILG-KFVRASSSVPSFTP--NNGGAVSSDSLKSPPISKKGEPNSK 60
          MNSMFSLFDAFAAE +LG  FVRASSS+PSFTP  NN  A SS   K  P  KK EP  K
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSMRPRFALEFDGLNCFETLVPN 82
          NSS++PRFALE DGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

BLAST of Tan0005787 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.8 bits (268), Expect = 4.3e-20
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1   MNSMFSLFDAFAAELILGKFVRASSSVPSFTPN--NGGAVSSDSLKSPPISKKGEPN--- 60
           MNSMFS FDAFAAE++LGKFV AS+SVPSFTPN   GG+ SS  +KS P  KK E N   
Sbjct: 81  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMP-GKKEEANAVA 140

Query: 61  -SKNSSMRPRFALEFDGLNCFETLVPN 82
            SKNS M+PRFALE DGLNCFETLVPN
Sbjct: 141 KSKNSLMKPRFALELDGLNCFETLVPN 166

BLAST of Tan0005787 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 4.3e-20
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPN--NGGAVSSDSLKSPPISKKGEPN--- 60
          MNSMFS FDAFAAE++LGKFV AS+SVPSFTPN   GG+ SS  +KS P  KK E N   
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMP-GKKEEANAVA 60

Query: 61 -SKNSSMRPRFALEFDGLNCFETLVPN 82
           SKNS M+PRFALE DGLNCFETLVPN
Sbjct: 61 KSKNSLMKPRFALELDGLNCFETLVPN 86

BLAST of Tan0005787 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNNGGAVSSDSLKSP-PISKKGEPNSKNS 60
          MNSMFSLFDAFAAE +LG FVRASSSVPSFTPNN  A  S ++  P P  K+ EP SKNS
Sbjct: 1  MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPNNNNA--SPAVPKPLPSKKEEEPKSKNS 60

Query: 61 SMRPRFALEFDGLNCFETLVPN 82
           M+PRFALE DGLNCFETLVPN
Sbjct: 61 LMKPRFALELDGLNCFETLVPN 80

BLAST of Tan0005787 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.2e-21
Identity = 61/84 (72.62%), Postives = 65/84 (77.38%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILG-KFVRASSSVPSFTP--NNGGAVSSDSLKSPPISKKGEPNSK 60
          MNSMFSLFDAFAAE +LG  FVRASSS+PSFTP  NN  A SS   K  P  KK EP  K
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSMRPRFALEFDGLNCFETLVPN 82
          NSS++PRFALE DGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

BLAST of Tan0005787 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-20
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPN--NGGAVSSDSLKSPPISKKGEPN--- 60
          MNSMFS FDAFAAE++LGKFV AS+SVPSFTPN   GG+ SS  +KS P  KK E N   
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMP-GKKEEANAVA 60

Query: 61 -SKNSSMRPRFALEFDGLNCFETLVPN 82
           SKNS M+PRFALE DGLNCFETLVPN
Sbjct: 61 KSKNSLMKPRFALELDGLNCFETLVPN 86

BLAST of Tan0005787 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.0e-12
Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNN--GGAVSSDSLKSPPISKKGEPNSKN 60
          MNSMFSLFDAFAAEL++ K  RASS   SF PNN  GG+V S    + P + +   ++KN
Sbjct: 1  MNSMFSLFDAFAAELLMAKTFRASS---SFAPNNGSGGSVKSPPSNAAPDNLEQPKSNKN 60

Query: 61 SSMR-PRFALEFDGLNCFETLV 80
          S +R PR A EFDGLNCFETLV
Sbjct: 61 SLLRPPRLAPEFDGLNCFETLV 79

BLAST of Tan0005787 vs. ExPASy TrEMBL
Match: A0A5C7H1W0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_023293 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06
Identity = 44/87 (50.57%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVR--------ASSSVPSFTPNNGGAVSSDSLKSPPISKKG 60
          MNS+FS FDAF+AEL LG+ VR         SS+  +   NN    S +S K   I+KK 
Sbjct: 1  MNSIFSSFDAFSAEL-LGQKVRVSFAPTTTCSSTNATQKNNNNNLQSQESTKDVAINKK- 60

Query: 61 EPNSKNSSMRPRFALEFDGLNCFETLV 80
             S +SS +PRFA E DGLNCFETLV
Sbjct: 61 --TSTSSSSKPRFAPELDGLNCFETLV 83

BLAST of Tan0005787 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNNGGAVSSDSLKSPPIS-KKGEPNSKNS 60
          MNSMFS FDA  AE I+GK V A+S V     N+  + SS   ++  +S KK E  SKN 
Sbjct: 1  MNSMFSAFDAMCAE-IMGKKVTAASYVYRSERNSASSSSSVGGQNASLSLKKDEKASKNM 60

Query: 61 SM---RPRFALEFDGLNCFETLV 80
           +    PRFALE DGL+CFET+V
Sbjct: 61 DLPTKTPRFALELDGLHCFETIV 82

BLAST of Tan0005787 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 3.8e-06
Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAELILGKFVRASSSVPSFTPNNGGAVSSDSLKSPPISKKGEPNSKNSS 60
          MNSMFS FDA  AE ++GK + ASS   +       A      +     +K   +SK   
Sbjct: 1  MNSMFSAFDALFAE-VMGKNLMASSFTATTATTKPAAAPQTQTQ-----EKANASSKKIG 60

Query: 61 M---RPRFALEFDGLNCFETLV 80
          +    PRFALE DGL+CFET+V
Sbjct: 61 LVQKIPRFALELDGLHCFETIV 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_011654674.11.0e-2174.39uncharacterized protein LOC105435432 [Cucumis sativus][more]
XP_023522684.11.1e-2071.26uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo][more]
KAA0042638.11.5e-2072.62uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK0... [more]
KAG6579594.14.3e-2071.26hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022929066.14.3e-2071.26uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothet... [more]
Match NameE-valueIdentityDescription
A0A0A0KJT85.0e-2274.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1[more]
A0A5D3C6N37.2e-2172.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1EM232.1e-2071.26uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A6J1E0L68.0e-1259.76uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
A0A5C7H1W01.3e-0650.57Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_023293 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G32928.11.6e-0950.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G32920.13.8e-0641.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..62
NoneNo IPR availablePANTHERPTHR33641:SF2BNAA08G06880D PROTEINcoord: 1..81
NoneNo IPR availablePANTHERPTHR33641OS06G0133500 PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0005787.1Tan0005787.1mRNA