Tan0005727 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGATGGAGAAGAGGGGAGAAGGAAGTGATACGATCTAATCGACCATTACAGTGGATCCCTCCAGTCAATGGTTGCCTGAAACTCAACACAGATGCAACACTTTCATCCGCTTCCAATGTCACTGGGTTGGGGGCAATAATAAGGGATTCTGAAGGGAAGATGATAGCGGCAAAGTCTGAAACAGTGAAGGGAAAAATGAATGTATTAGCTGCGGAGGCCTTTACGATAATCAAAGGGATAGAAATGGCGAAAGAGTTAGGGTTTAATCGGTTGTAG ATGAGAAGATGGAGAAGAGGGGAGAAGGAAGTGATACGATCTAATCGACCATTACAGTGGATCCCTCCAGTCAATGGTTGCCTGAAACTCAACACAGATGCAACACTTTCATCCGCTTCCAATGTCACTGGGTTGGGGGCAATAATAAGGGATTCTGAAGGGAAGATGATAGCGGCAAAGTCTGAAACAGTGAAGGGAAAAATGAATGTATTAGCTGCGGAGGCCTTTACGATAATCAAAGGGATAGAAATGGCGAAAGAGTTAGGGTTTAATCGGTTGTAG ATGAGAAGATGGAGAAGAGGGGAGAAGGAAGTGATACGATCTAATCGACCATTACAGTGGATCCCTCCAGTCAATGGTTGCCTGAAACTCAACACAGATGCAACACTTTCATCCGCTTCCAATGTCACTGGGTTGGGGGCAATAATAAGGGATTCTGAAGGGAAGATGATAGCGGCAAAGTCTGAAACAGTGAAGGGAAAAATGAATGTATTAGCTGCGGAGGCCTTTACGATAATCAAAGGGATAGAAATGGCGAAAGAGTTAGGGTTTAATCGGTTGTAG MRRWRRGEKEVIRSNRPLQWIPPVNGCLKLNTDATLSSASNVTGLGAIIRDSEGKMIAAKSETVKGKMNVLAAEAFTIIKGIEMAKELGFNRL Homology
BLAST of Tan0005727 vs. NCBI nr
Match: XP_031131899.1 (uncharacterized protein LOC116033287 [Ipomoea triloba]) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-09 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Tan0005727 vs. NCBI nr
Match: XP_031107819.1 (uncharacterized protein LOC116012428 [Ipomoea triloba]) HSP 1 Score: 65.5 bits (158), Expect = 2.8e-07 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of Tan0005727 vs. NCBI nr
Match: XP_030509082.1 (uncharacterized protein LOC115723746 [Cannabis sativa]) HSP 1 Score: 65.1 bits (157), Expect = 3.7e-07 Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 0
BLAST of Tan0005727 vs. NCBI nr
Match: KAF4359769.1 (hypothetical protein F8388_008331 [Cannabis sativa]) HSP 1 Score: 64.7 bits (156), Expect = 4.8e-07 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0005727 vs. NCBI nr
Match: KAF4362586.1 (hypothetical protein F8388_011413 [Cannabis sativa]) HSP 1 Score: 64.7 bits (156), Expect = 4.8e-07 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Tan0005727 vs. ExPASy TrEMBL
Match: A0A803Q1A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.6e-08 Identity = 36/88 (40.91%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Tan0005727 vs. ExPASy TrEMBL
Match: A0A803Q0L9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.0e-08 Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of Tan0005727 vs. ExPASy TrEMBL
Match: A0A7J6GE83 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_016227 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of Tan0005727 vs. ExPASy TrEMBL
Match: A0A7J6EPY6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008331 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0005727 vs. ExPASy TrEMBL
Match: A0A803NTC1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0
BLAST of Tan0005727 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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