Tan0005665 (gene) Snake gourd v1

Overview
NameTan0005665
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationLG06: 68879090 .. 68880406 (+)
RNA-Seq ExpressionTan0005665
SyntenyTan0005665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTACCAAGTTCGAGGTGGAGCGGTTTGATGGGAAAGGAGATTTTGGTCTATGGAAGATCAAAATGTTGGCCATCGTTCGTCAACAAAAGGTCGATTACGCACTTTTGGAGGCTAAGGAAATTCCGAACAACATAACAGCGGACCAACTGAAAGAGATAAATAAGGTAGCTCACAGCCTTATAATCTTTTATTTGTCTGATACAATTATAAGGCAAATGCGTAGTGAAGATACCGCTGCTAAACTTTGGACAAAATTAGAATCTACCTACCAAGTAACATCAATTTCAAGCAAAATATTTTTAAAATCTAATTTCTTTAGTTTTAAAATGGACTCTAGTAAAAGTATGAAAGATAACCTAGATGAATTCCATAGAGTAGTTTCTGAAATGAAAAATATAGGTGAAATCTTTTCTCGATGAAAATCATGTCAGAGTTTCGATAAATTCTTTACCGAATCTTATAATGATGTGAAATCTGCTATGAAGTTTGGTAGGGATACTTTGTCCACTGAAATTGTCTTAAATGCCATTAGAGTAAAAGAACAAGAACTAAAAGAAACCAAGAAATCTAATAGTGAGACTTTGTACGTTAGAGGGAGATCAGAGAATAGGAAAAAGCATAGAAGCAAGAGTAGGGGTAGATCAAAGTCTAAGGGGGCTAGTAATAGGAGGTGTTATCATTGTCAAAAAGAAGGCCACATTAGAAGGTTTTGTCCTGACCTTAGGAATAAAAAGTCGTCGGGTAAAGGGAAAGAAGAGTCTAGTGTAGTAAACCTTAGTGAAGAGTATAACCACTCTCTTATGGTTAGTAACACTAGAGAGGATGACACTTGGATCCTAGATTCAGGTTGTTCTTTCCATATGACCCCTAATAGAGAATGGCTAGAAGACTTCCAAACCGGTGTGGGAGGTAAAGTCATGTTAGGGAACCGACACTTTTGTAGTGTAGAAGGTCAAGAAACAGTACGCCTTAGGCTTCATGACGGAAATATTAGGTTTCTAACTGGAGTTAGGTACGTACCTGAAGTTAAAAGAAACCTAATATCCCTTAGCATGTTAGATAAGCAAGGGTACACCATTAAGTTAGAGGGTGGTGTTATAAAAGTCATAAAGGGCATCTTAGTTGCAATGAAAGGGCTTCTTAAGGATACCTTATACTCTTTAGAGGGTTCGACGGTCATAGGGTCAAGTGATCTAGTTAAAGAGAGTGACAATTCCAAAATTACCCTTTGGCATAAACGCTTAGGTCACATGGGTGAGCAAGGAATTAGGGAGTTAATAAAACAACAAGTAATTCCTAACATAAAAATGTAG

mRNA sequence

ATGAGTACCAAGTTCGAGGTGGAGCGGTTTGATGGGAAAGGAGATTTTGGTCTATGGAAGATCAAAATGTTGGCCATCGTTCGTCAACAAAAGGTCGATTACGCACTTTTGGAGGCTAAGGAAATTCCGAACAACATAACAGCGGACCAACTGAAAGAGATAAATAAGGTAGCTCACAGCCTTATAATCTTTTATTTGTCTGATACAATTATAAGGCAAATGCGTAGTGAAGATACCGCTGCTAAACTTTGGACAAAATTAGAATCTACCTACCAAAGTTTCGATAAATTCTTTACCGAATCTTATAATGATGTGAAATCTGCTATGAAGTTTGGTAGGGATACTTTGTCCACTGAAATTGTCTTAAATGCCATTAGAGTAAAAGAACAAGAACTAAAAGAAACCAAGAAATCTAATAGTGAGACTTTGTACGTTAGAGGGAGATCAGAGAATAGGAAAAAGCATAGAAGCAAGAGTAGGGGTAGATCAAAGTCTAAGGGGGCTAGTAATAGGAGGTGTTATCATTGTCAAAAAGAAGGCCACATTAGAAGGTTTTGTCCTGACCTTAGGAATAAAAAGTCGTCGGGTAAAGGGAAAGAAGAGTCTAGTGTAGTAAACCTTAGTGAAGAGTATAACCACTCTCTTATGGTTAGTAACACTAGAGAGGATGACACTTGGATCCTAGATTCAGGTTGTTCTTTCCATATGACCCCTAATAGAGAATGGCTAGAAGACTTCCAAACCGGTGTGGGAGGTAAAGTCATGTTAGGGAACCGACACTTTTGTAGTGTAGAAGGTCAAGAAACAGTACGCCTTAGGCTTCATGACGGAAATATTAGGTTTCTAACTGGAGTTAGGTACGTACCTGAAGTTAAAAGAAACCTAATATCCCTTAGCATGTTAGATAAGCAAGGGTACACCATTAAGTTAGAGGGTGGTGTTATAAAAGTCATAAAGGGCATCTTAGTTGCAATGAAAGGGCTTCTTAAGGATACCTTATACTCTTTAGAGGGTTCGACGGTCATAGGGTCAAGTGATCTAGTTAAAGAGAGTGACAATTCCAAAATTACCCTTTGGCATAAACGCTTAGGTCACATGGGTGAGCAAGGAATTAGGGAGTTAATAAAACAACAAGTAATTCCTAACATAAAAATGTAG

Coding sequence (CDS)

ATGAGTACCAAGTTCGAGGTGGAGCGGTTTGATGGGAAAGGAGATTTTGGTCTATGGAAGATCAAAATGTTGGCCATCGTTCGTCAACAAAAGGTCGATTACGCACTTTTGGAGGCTAAGGAAATTCCGAACAACATAACAGCGGACCAACTGAAAGAGATAAATAAGGTAGCTCACAGCCTTATAATCTTTTATTTGTCTGATACAATTATAAGGCAAATGCGTAGTGAAGATACCGCTGCTAAACTTTGGACAAAATTAGAATCTACCTACCAAAGTTTCGATAAATTCTTTACCGAATCTTATAATGATGTGAAATCTGCTATGAAGTTTGGTAGGGATACTTTGTCCACTGAAATTGTCTTAAATGCCATTAGAGTAAAAGAACAAGAACTAAAAGAAACCAAGAAATCTAATAGTGAGACTTTGTACGTTAGAGGGAGATCAGAGAATAGGAAAAAGCATAGAAGCAAGAGTAGGGGTAGATCAAAGTCTAAGGGGGCTAGTAATAGGAGGTGTTATCATTGTCAAAAAGAAGGCCACATTAGAAGGTTTTGTCCTGACCTTAGGAATAAAAAGTCGTCGGGTAAAGGGAAAGAAGAGTCTAGTGTAGTAAACCTTAGTGAAGAGTATAACCACTCTCTTATGGTTAGTAACACTAGAGAGGATGACACTTGGATCCTAGATTCAGGTTGTTCTTTCCATATGACCCCTAATAGAGAATGGCTAGAAGACTTCCAAACCGGTGTGGGAGGTAAAGTCATGTTAGGGAACCGACACTTTTGTAGTGTAGAAGGTCAAGAAACAGTACGCCTTAGGCTTCATGACGGAAATATTAGGTTTCTAACTGGAGTTAGGTACGTACCTGAAGTTAAAAGAAACCTAATATCCCTTAGCATGTTAGATAAGCAAGGGTACACCATTAAGTTAGAGGGTGGTGTTATAAAAGTCATAAAGGGCATCTTAGTTGCAATGAAAGGGCTTCTTAAGGATACCTTATACTCTTTAGAGGGTTCGACGGTCATAGGGTCAAGTGATCTAGTTAAAGAGAGTGACAATTCCAAAATTACCCTTTGGCATAAACGCTTAGGTCACATGGGTGAGCAAGGAATTAGGGAGTTAATAAAACAACAAGTAATTCCTAACATAAAAATGTAG

Protein sequence

MSTKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSLIIFYLSDTIIRQMRSEDTAAKLWTKLESTYQSFDKFFTESYNDVKSAMKFGRDTLSTEIVLNAIRVKEQELKETKKSNSETLYVRGRSENRKKHRSKSRGRSKSKGASNRRCYHCQKEGHIRRFCPDLRNKKSSGKGKEESSVVNLSEEYNHSLMVSNTREDDTWILDSGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKITLWHKRLGHMGEQGIRELIKQQVIPNIKM
Homology
BLAST of Tan0005665 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-38
Identity = 121/448 (27.01%), Postives = 208/448 (46.43%), Query Frame = 0

Query: 4   KFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSLII 63
           K+EV +F+G   F  W+ +M  ++ QQ +   L    + P+ + A+   ++++ A S I 
Sbjct: 5   KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR 64

Query: 64  FYLSDTIIRQMRSEDTAAKLWTKLESTYQS------------------------------ 123
            +LSD ++  +  EDTA  +WT+LES Y S                              
Sbjct: 65  LHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNV 124

Query: 124 FDKFFTE-----------------------SYNDVKSAMKFGRDTLSTEIVLNAIRVKEQ 183
           F+   T+                       SY+++ + +  G+ T+  + V +A+ + E+
Sbjct: 125 FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEK 184

Query: 184 ELKETKKSNSETLYV-RGRSENRKKH---RSKSRGRSKSKGASN-RRCYHCQKEGHIRRF 243
             K+ +      +   RGRS  R  +   RS +RG+SK++  S  R CY+C + GH +R 
Sbjct: 185 MRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRD 244

Query: 244 CPDLRNKK--SSGKGKEESSVVNLSEEYNHSLMVSNTRE-------DDTWILDSGCSFHM 303
           CP+ R  K  +SG+  ++++   +    N  L ++   E       +  W++D+  S H 
Sbjct: 245 CPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHA 304

Query: 304 TPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLI 363
           TP R+    +  G  G V +GN  +  + G   + ++ + G    L  VR+VP+++ NLI
Sbjct: 305 TPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLI 364

Query: 364 SLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKI 385
           S   LD+ GY         ++ KG LV  KG+ + TLY       I   +L    D   +
Sbjct: 365 SGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAE--ICQGELNAAQDEISV 424

BLAST of Tan0005665 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-09
Identity = 103/453 (22.74%), Postives = 187/453 (41.28%), Query Frame = 0

Query: 4   KFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSLII 63
           K  ++ FDG+  + +WK ++ A++ +Q V   L     +  N   D  K+  + A S II
Sbjct: 5   KRNIKPFDGE-KYAIWKFRIRALLAEQDV---LKVVDGLMPNEVDDSWKKAERCAKSTII 64

Query: 64  FYLSDTIIRQMRSEDTAAKLWTKLESTYQS------------------------------ 123
            YLSD+ +    S+ TA ++   L++ Y+                               
Sbjct: 65  EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 124

Query: 124 FDKFFTE-----------------------SYNDVKSAMK-FGRDTLSTEIVLNAIRVKE 183
           FD+  +E                        Y+ + +A++    + L+   V N  R+ +
Sbjct: 125 FDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKN--RLLD 184

Query: 184 QELK------ETKKS-------NSETLYVRGRSENR-KKHRSKSRGRSKSKGASNRRCYH 243
           QE+K      +T K        N+   Y     +NR  K +   +G SK K     +C+H
Sbjct: 185 QEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYK----VKCHH 244

Query: 244 CQKEGHIRRFCPDLRNKKSSGKGKEESSVVNLSEEYNHSLM---VSNTREDDT--WILDS 303
           C +EGHI++ C   + +  + K KE    V  +  +  + M   V+NT   D   ++LDS
Sbjct: 245 CGREGHIKKDCFHYK-RILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDS 304

Query: 304 GCSFHMTPNREWLEDFQTGVGG-KVMLGNR-HFCSVEGQETVRLRLHDGNIRFLTGVRYV 363
           G S H+  +     D    V   K+ +  +  F     +  VRLR +D  I  L  V + 
Sbjct: 305 GASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLR-NDHEIT-LEDVLFC 364

Query: 364 PEVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMK--GLLKDTLYSLEGSTVIGSSD 380
            E   NL+S+  L + G +I+ +   + + K  L+ +K  G+L +         +   + 
Sbjct: 365 KEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNV------PVINFQAY 424

BLAST of Tan0005665 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0

Query: 313 GVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKITLWHKRLGHMGEQGIR 372
           GV+KV+KG    +KG   D+LY L+GS   G S+L  E+   +  LWH RL HM ++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLA-ETAKDETRLWHSRLAHMSQRGME 86

Query: 373 ELIKQQVIPNIKM 386
            L+K+  + + K+
Sbjct: 87  LLVKKGFLDSSKV 98

BLAST of Tan0005665 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-74
Identity = 175/455 (38.46%), Postives = 265/455 (58.24%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+S 
Sbjct: 3   STRFEVSKFNGHGDFALWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+GRD+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-74
Identity = 175/455 (38.46%), Postives = 265/455 (58.24%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+S 
Sbjct: 3   STRFEVSKFNGHGDFSLWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+GRD+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-73
Identity = 173/455 (38.02%), Postives = 264/455 (58.02%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+  
Sbjct: 3   STRFEVSKFNGHGDFALWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYWT 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+G D+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. NCBI nr
Match: KAA0067607.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ97155.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-71
Identity = 164/437 (37.53%), Postives = 253/437 (57.89%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FE+ +F+G GDF +W+ K+  I+ Q KV   +L+ +++P NIT  + ++++++ +S 
Sbjct: 3   STRFEMSKFNGNGDFAIWRKKIRVILVQHKV-AKILDEEKLPENITESEKRDMDEMTYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY-----------------------QSFDKF- 121
           I+ YLSD ++R +    T  +LW KLES Y                       ++ D+F 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKFLPNKEKFFRYKMDQSKSLEENLDEFQ 122

Query: 122 -------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVKEQEL 181
                                      E+Y +VK+A+K+GRD+L+  IVL+A++ +  E+
Sbjct: 123 KIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEI 182

Query: 182 KETKKSNSETLYVRGRSENRKKHRSKSRGRSKSKGASNRRCYHCQKEGHIRRFCPDLRNK 241
           K+ +K + E L  RGRSE +     +   RSKSKG S R+C+ C K GH ++ CP  +++
Sbjct: 183 KKERK-DGELLMARGRSEKKSWKGKERSSRSKSKGKS-RKCFLCHK-GHFKKNCPLNKSR 242

Query: 242 KSSGKGKEESSVVNLSE-----EYNHSLMVSNTREDDTWILDSGCSFHMTPNREWLEDFQ 301
           ++S      +   N +E     E    LMVS+    D WI+DSGC+FHMTP+R++L +FQ
Sbjct: 243 EASTSEANVTDGYNFAEITDGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ 302

Query: 302 TGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLISLSMLDKQGYT 361
            G GGKV+LG+   C V+   +V++  HD  +R LT VRYVP++KRNLISL  LD+ G T
Sbjct: 303 KGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVPKLKRNLISLGELDRSGCT 362

Query: 362 IKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKITLWHKRLGHMG 385
           IK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +          LWH RL H+ 
Sbjct: 363 IKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIASGKVTYMFMLWHNRLAHVS 422

BLAST of Tan0005665 vs. NCBI nr
Match: KAD4178028.1 (hypothetical protein E3N88_26619 [Mikania micrantha])

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-68
Identity = 162/443 (36.57%), Postives = 241/443 (54.40%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           STKFE+E+FDG+ DF LW++KM A++  Q V  AL  A+E+P  ++  + KE+ + AHS 
Sbjct: 296 STKFEIEKFDGRNDFSLWRVKMRALLVHQGVVDALKGAEELPTTMSDKEKKEVMEKAHSA 355

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTYQS---------------------------- 121
           II  L D ++R++  E+TAAK+W KLES Y +                            
Sbjct: 356 IILSLGDRVLREVSKEETAAKVWLKLESLYMTKSLANRLYLKKRLYTYQMNSVKPLEDHI 415

Query: 122 --FDKFFTE-----------------------SYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
             F+K   +                       SY      + FGR++L+ E V+ A+  K
Sbjct: 416 DEFNKILLDLENIDVEIDDEDRAIIFLSALPSSYEHFVDTLMFGRESLTMEEVIAAMNSK 475

Query: 182 E-QELKETKKSNSETLYVRGRSENRKKHRSKSRGRSKSKGASNRRCYHCQKEGHIRRFCP 241
           E Q  KE K  N + LYVRGRSE+R     +   RSKSKG   RRC+ C  E H +R CP
Sbjct: 476 ELQRKKELKDDNGDGLYVRGRSEHRSNKDKRQSTRSKSKG---RRCFVCNSEKHFKRDCP 535

Query: 242 DLRNKK---SSGKGKEESSVVNLSEEYNHS--LMVSNTREDDTWILDSGCSFHMTPNREW 301
           + + +K   +  K K   S  +  + Y  +  L++S    D +WILDSGCS+HMTP++E+
Sbjct: 536 EWKKRKAEYAQAKKKSSGSPESSCDGYESADVLVISKGDTDQSWILDSGCSYHMTPHKEF 595

Query: 302 LEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLISLSMLD 361
            ++ ++G  G V LG+ H C ++G  TV  +L + ++  L  VRY+P+++RNLISL   +
Sbjct: 596 FQELKSGSHGTVQLGDDHPCKIQGMGTVIFKLGNESVMELKDVRYIPDLRRNLISLGAFE 655

Query: 362 KQGYTIKLEGGVIKVIKGILVAMKGLLKD-TLYSLEGSTVIGSSDLVKESDNSKITLWHK 385
           + G+ + L  G  KV+KG LV M G  K+  +Y L+G  VI  + + +    S    WH+
Sbjct: 656 RDGHHVSLRDGKAKVVKGALVVMTGTRKENNIYVLDGKVVIEVAAVAESKTVSNAMKWHR 715

BLAST of Tan0005665 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 8.3e-75
Identity = 175/455 (38.46%), Postives = 265/455 (58.24%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+S 
Sbjct: 3   STRFEVSKFNGHGDFALWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+GRD+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 8.3e-75
Identity = 175/455 (38.46%), Postives = 265/455 (58.24%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+S 
Sbjct: 3   STRFEVSKFNGHGDFSLWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+GRD+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.5e-73
Identity = 173/455 (38.02%), Postives = 264/455 (58.02%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FEV +F+G GDF LW+ K+ AI+ Q KV   +L+ + +P+NIT  + ++++++A+  
Sbjct: 3   STRFEVSKFNGHGDFALWRKKIRAILVQHKV-AKILDEERLPDNITESEKRDMDEMAYWT 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY---------------------------QSF 121
           I+ YLSD ++R +    T  +LW KLES Y                           ++ 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENL 122

Query: 122 DKF--------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
           D+F                            E+Y +VK+A+K+G D+L+  IVL+A++ +
Sbjct: 123 DEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTR 182

Query: 182 EQELKETKKSNSETLYVRGRSENRKKHRSKSRG-RSKSKGASNRRCYHCQKEGHIRRFCP 241
             E+K+ +K + E L  RGRSE +K  + K R  RSKSKG S R+C+ C KEGH ++ CP
Sbjct: 183 NLEIKKERK-DGELLMARGRSE-KKSWKGKERSFRSKSKGKS-RKCFLCHKEGHFKKNCP 242

Query: 242 DLRNKKSSGKGKEESSVVNLSEEYNHS------------------LMVSNTREDDTWILD 301
             +++++S      +S  N+++ YN +                  LMVS+    D WI+D
Sbjct: 243 LNKSREAS------TSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMD 302

Query: 302 SGCSFHMTPNREWLEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVP 361
           SGC+FHMTP+R++L +FQ   GGKV+LG+   C V+G  +V++  HDG +R LT VRYVP
Sbjct: 303 SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 362

Query: 362 EVKRNLISLSMLDKQGYTIKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVK 385
           ++KRNLISL  LD+ G TIK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +  
Sbjct: 363 KLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIAS 422

BLAST of Tan0005665 vs. ExPASy TrEMBL
Match: A0A5A7VKC2 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00310 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 164/437 (37.53%), Postives = 253/437 (57.89%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           ST+FE+ +F+G GDF +W+ K+  I+ Q KV   +L+ +++P NIT  + ++++++ +S 
Sbjct: 3   STRFEMSKFNGNGDFAIWRKKIRVILVQHKV-AKILDEEKLPENITESEKRDMDEMTYST 62

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTY-----------------------QSFDKF- 121
           I+ YLSD ++R +    T  +LW KLES Y                       ++ D+F 
Sbjct: 63  ILLYLSDEVLRLVDEATTTGELWKKLESLYLTKFLPNKEKFFRYKMDQSKSLEENLDEFQ 122

Query: 122 -------------------------FTESYNDVKSAMKFGRDTLSTEIVLNAIRVKEQEL 181
                                      E+Y +VK+A+K+GRD+L+  IVL+A++ +  E+
Sbjct: 123 KIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEI 182

Query: 182 KETKKSNSETLYVRGRSENRKKHRSKSRGRSKSKGASNRRCYHCQKEGHIRRFCPDLRNK 241
           K+ +K + E L  RGRSE +     +   RSKSKG S R+C+ C K GH ++ CP  +++
Sbjct: 183 KKERK-DGELLMARGRSEKKSWKGKERSSRSKSKGKS-RKCFLCHK-GHFKKNCPLNKSR 242

Query: 242 KSSGKGKEESSVVNLSE-----EYNHSLMVSNTREDDTWILDSGCSFHMTPNREWLEDFQ 301
           ++S      +   N +E     E    LMVS+    D WI+DSGC+FHMTP+R++L +FQ
Sbjct: 243 EASTSEANVTDGYNFAEITDGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ 302

Query: 302 TGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLISLSMLDKQGYT 361
            G GGKV+LG+   C V+   +V++  HD  +R LT VRYVP++KRNLISL  LD+ G T
Sbjct: 303 KGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVPKLKRNLISLGELDRSGCT 362

Query: 362 IKLEGGVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKITLWHKRLGHMG 385
           IK E GV+KV KG LV ++G L+  LY LEG+TV GS+ +          LWH RL H+ 
Sbjct: 363 IKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIASGKVTYMFMLWHNRLAHVS 422

BLAST of Tan0005665 vs. ExPASy TrEMBL
Match: A0A5N6MUI5 (CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_26619 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 162/443 (36.57%), Postives = 241/443 (54.40%), Query Frame = 0

Query: 2   STKFEVERFDGKGDFGLWKIKMLAIVRQQKVDYALLEAKEIPNNITADQLKEINKVAHSL 61
           STKFE+E+FDG+ DF LW++KM A++  Q V  AL  A+E+P  ++  + KE+ + AHS 
Sbjct: 296 STKFEIEKFDGRNDFSLWRVKMRALLVHQGVVDALKGAEELPTTMSDKEKKEVMEKAHSA 355

Query: 62  IIFYLSDTIIRQMRSEDTAAKLWTKLESTYQS---------------------------- 121
           II  L D ++R++  E+TAAK+W KLES Y +                            
Sbjct: 356 IILSLGDRVLREVSKEETAAKVWLKLESLYMTKSLANRLYLKKRLYTYQMNSVKPLEDHI 415

Query: 122 --FDKFFTE-----------------------SYNDVKSAMKFGRDTLSTEIVLNAIRVK 181
             F+K   +                       SY      + FGR++L+ E V+ A+  K
Sbjct: 416 DEFNKILLDLENIDVEIDDEDRAIIFLSALPSSYEHFVDTLMFGRESLTMEEVIAAMNSK 475

Query: 182 E-QELKETKKSNSETLYVRGRSENRKKHRSKSRGRSKSKGASNRRCYHCQKEGHIRRFCP 241
           E Q  KE K  N + LYVRGRSE+R     +   RSKSKG   RRC+ C  E H +R CP
Sbjct: 476 ELQRKKELKDDNGDGLYVRGRSEHRSNKDKRQSTRSKSKG---RRCFVCNSEKHFKRDCP 535

Query: 242 DLRNKK---SSGKGKEESSVVNLSEEYNHS--LMVSNTREDDTWILDSGCSFHMTPNREW 301
           + + +K   +  K K   S  +  + Y  +  L++S    D +WILDSGCS+HMTP++E+
Sbjct: 536 EWKKRKAEYAQAKKKSSGSPESSCDGYESADVLVISKGDTDQSWILDSGCSYHMTPHKEF 595

Query: 302 LEDFQTGVGGKVMLGNRHFCSVEGQETVRLRLHDGNIRFLTGVRYVPEVKRNLISLSMLD 361
            ++ ++G  G V LG+ H C ++G  TV  +L + ++  L  VRY+P+++RNLISL   +
Sbjct: 596 FQELKSGSHGTVQLGDDHPCKIQGMGTVIFKLGNESVMELKDVRYIPDLRRNLISLGAFE 655

Query: 362 KQGYTIKLEGGVIKVIKGILVAMKGLLKD-TLYSLEGSTVIGSSDLVKESDNSKITLWHK 385
           + G+ + L  G  KV+KG LV M G  K+  +Y L+G  VI  + + +    S    WH+
Sbjct: 656 RDGHHVSLRDGKAKVVKGALVVMTGTRKENNIYVLDGKVVIEVAAVAESKTVSNAMKWHR 715

BLAST of Tan0005665 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-08
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0

Query: 313 GVIKVIKGILVAMKGLLKDTLYSLEGSTVIGSSDLVKESDNSKITLWHKRLGHMGEQGIR 372
           GV+KV+KG    +KG   D+LY L+GS   G S+L  E+   +  LWH RL HM ++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLA-ETAKDETRLWHSRLAHMSQRGME 86

Query: 373 ELIKQQVIPNIKM 386
            L+K+  + + K+
Sbjct: 87  LLVKKGFLDSSKV 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109782.1e-3827.01Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.6e-0922.74Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P932933.2e-0739.73Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
TYK25306.11.7e-7438.46putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0050719.11.7e-7438.46putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0047995.17.2e-7338.02retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... [more]
KAA0067607.13.0e-7137.53retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]... [more]
KAD4178028.14.1e-6836.57hypothetical protein E3N88_26619 [Mikania micrantha][more]
Match NameE-valueIdentityDescription
A0A5D3DNU18.3e-7538.46Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5A7UB258.3e-7538.46Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5A7U2U73.5e-7338.02Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... [more]
A0A5A7VKC21.5e-7137.53Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... [more]
A0A5N6MUI52.0e-6836.57CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_2661... [more]
Match NameE-valueIdentityDescription
ATMG00300.12.3e-0839.73Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 172..188
e-value: 0.0099
score: 23.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 171..188
score: 9.454925
NoneNo IPR availableGENE3D4.10.60.10coord: 130..207
e-value: 2.3E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..171
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 3..89
coord: 149..378
NoneNo IPR availablePANTHERPTHR34676:SF13SUBFAMILY NOT NAMEDcoord: 149..378
NoneNo IPR availablePANTHERPTHR34676:SF13SUBFAMILY NOT NAMEDcoord: 3..89
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 333..384
e-value: 1.1E-9
score: 38.0
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 154..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0005665.1Tan0005665.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding