Tan0005648 (gene) Snake gourd v1

Overview


Name	Tan0005648
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	LG02: 17728633 .. 17741044 (-)
RNA-Seq Expression	Tan0005648
Synteny	Tan0005648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTATTGGTGTTCTAAAAGTACCTTTTCGAAGTCCTGGAGAGGAAGATGCATCATGGGTTGACGTATAGTGCGACTTGTCAGATATATTAGGTCATATGGTATTTCCCCGTTCTCTCCCCCGATCGAGATATCCTCTCTTTCGCCCAAGACAGATTGATTTAATTATCAAAAATTTGGAGCGCGAAGTGCAATTAGATCTATTTTTTGGGGGTATCCAGATTAATATTATCAATTAGAATAATTTATGGTTTTCTTGTTTGTACTAATAAAATGAAGTTTCCAGGCCCCGCTTAGAAAAAACTCAATTTGGAATCTATCTATTCTATGATTACTACTTGTATCATATTCTATTTAGAAATAGTATTGATATAAAACTGTTAATCAATCGAGTCATATGATGAATACATTGATTGAATATTTGGTTAAAAGTATGAAGTAAATTGAAAAAAAAAAGAAGTGGTAGCAAAATGCTATTTGGGCATTTGTCCTATATGTGCAAATCCAAGTCGGGCAGATCTTTACTCGGAGTAGAGCATAAACCTAAAAGAATTGAAGAAGACCATTCGGGAACAAGAAAATGACATCGCAATTTAAATTTGATCTCGATGAAACAATACATCAATGAAAAGTTAGTTCGATAAATTTAATGAATTGGTTTTTTATTTATTGAAATTTATAGTATAGAGAAACGACCTCGGGCCAAAGGAAAAAACTCATCTTTGTTGAAAAATGGGAGGGAAGAAAAAGCCCCTTCATTAGAAGTTAGAAAGAGTCCTCTAAAGAAGGCTAGAATCTAAACATTGATTTTTTTTTTCGCTATTTTTTTGAACCGTATGCATCAAAAGGTGCCCGTACGGTTCTTATGTGATACAATTTTATCCTAATCAACCGACTTTATCGGGAAATTTTACTTTTTTTAGGCCAAAAGGTTGATAGCGAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGATACCAAAGATTTGTATTTATTTATAAACTCTCCCGGTGGATGGGTAATACCCGGAGTAGCTATTTATGATACTATGAAATTTGTGCAACCAGATGTACAGACAATATGCATGGGATTAGCCGCTTCAATGAGATCATTTATTCTAGTCGGAGGAGAAATTATCAAACGTCTAGCATTCCCTCACGCTCGACGCCAATGATTTTTTTTTTTAGACAAAAAAGAAAACTATGCCTTCGCCATATAAAATATGAATATTAAGTAATAATAGCATGGCACTTTGAATTCGATATGAGAATTTTTTCTTATTGTTTTTTTTTTCTAAACCATTAGATTATGTATCGAAAGAGTAGTATGAGATAAAAGACATTTTCGATTTTAGTTGATTTATCGGAGGCCTCTTTCAGCGTCACAAACTTTTTTGTTTTCACGACTGAAGGCTCTTAACAATATTTCTATTATGAAAGACTACGAAATATTTATTTATATTTATTTTAAATTTGAAATACGAAAAAAAAGAAACTTTGGGATTGCTGAATAACAAACAAAATAATGAAGCAACGGAACCATCATAGTATTTTTTAATTACTAAAAAAAAAGGAAGGGTGGTTATTGGATCATTTACCGCTCGGGTCTGATAGATCCTCTATTTTCTATTCCTTCGATGGAAGGTAAAAATGAATTCCATTGTGGAGCCGTATGCACTACACAAAGGATGCCTGTACGGTTGTTAATCCTATCTTTTTTTTTTATTATCTTTGACTCATTATGATCATGCGAGATAGAGAAAACCATTTAGTAAATCATCAGGGTAATGATCCATCAACTTGCTAGTTCTTTTTATGAGGCATGTTATGGCCAAAAATAGGATTCGGTTTGACAGCGTAGAAGAGAGGCGAATGAGTGGTCGACCGGCTGAAATCGGAGAGTCCCATAACCGCCAGCCAGTCAAAATCCGGGAGACCGACCCAAGGGGGTCGGTCCGGCTCAAGGAGCCTACCTCAAGGGGTCGGCCCCGGTCAAAGGTGGGCCGACCCCATGGGGTCGGCTCCGAGCCGGAAGGTGCCGACCCCTTGGTCGCCTCGGCCAAAAAGCGGGCGACCTTGAGTCGGCTCCAATCGGGAGGCCGACCCCGGGTCCGCCCGGCCTGAAGGTGGGCCGACCACGAGGTTGGCGGCTCGAGCGCCGCCCGGCCGAAGGTGGGTCGATCCTCGAGTCGGCTCGCTTAAGGAACCGATCCCAAAGGGTCGGCTCGACCGATTCAAGATCGGAGGCTAACCCCAGAAGGGGTCACCCGAAGATATAGGCCGACCTTTATCGGACCACGAGGGGATGGCTCGTGGGCCAGACGGTGGCCCGACCCTCGAGGTCGGCCCGGTCGTAAAAGTCATTGTCGCGCGGATGTTGCTATGACGGATAGGAGAGAAACAAGGCGCGCGTGAAACGGTTCCTTTCCCAGAATCGCCGTCATTAAGCACGCCAATTATGGAGAGTAAATAGATAATAAAGCCTTGAAAGACCGTTACAAATATAAGGTCTATATTAACTCGTTGGGAAGCCCAACAAAGGTAAGCAATCATTTGGCCTGTGTTCTAGCTTGAGATTTACTTCTGTGCGAAATTATCCTCTCTAACTCGAGCGTCGGAGTGTGTGTGGCAGAGCACCACACCGGTGTTAATTTTCTTTCTTGCAGGAGATCGTTGTCCCCAACGATACAAATTCACCGTTGATCCGTCTAACTAAATTTCGGCATCAACAGGTGTGTGGCAGAGCACCACACAGGTGTTAGTTTTCTTTCTTGCAGGAGATCGTTGTCCCCAACGATACAAATTCACCGTTGATCCGAACCAAATTCCGGCATCAACAGTTGGCGCCGTCTGTGGGGATAATTTCATCTTGCAAAGTGCCACGTGTTTTGAAACCCTAACACCGTTCACCATGAGTAACCATCTGAATCAAGTCAACCCGATGAATGATGGAGAAGAGTCGGATAATGACCGACATCCTCACCAGATTCCGGCAAGGACGCAGAATGCCCAACCTGAGGAAGTTAACCAATGCACTATTCCAGTAGGGGCGGATCAGTACGCAGCATTGGAGCAGCGGGTTCGGGGCTTGGACGAAAACATCGCCAGAATTCTGGAGATACTGAATCGTCCAAACCCAATCGTGGAGGCTCTAAAAGATGTACCGGAGCAGAATCTCAACGGCGTCCGGAACGAAGAACAGGTTAATGCTCTGACACCACGTAAGTCCTTACCTTCAGACCGAGACCAGGCCAAAGGTAAGGGCCCGGCGAAAGAAGGGCAGGGCGAATCTCGGGTCCCACCGCGTAAGTCTGGTGACAAGCTACGGTTGGAAGGCAGCAAGGGGCGATCCCATCATGCGGAGCAGCAGAAGGCCGCATCTCGAGTGGGGGAGTCCCAAGTCAGGACTCAGGTGATCCACGAGAACCGAGGATACAAAGAACCACCATGCGCGCCAAGTCAACCGACAAAGATGACCGGAGGGACGACCGATCAAGGAGACCTAGCACGGGGTCAGATCTTAGAGAATTGATCAACTAGAAGAGAAAAGAAGTGGAGGTCGAAAGTCAACCTTGGGCGTCAGAACTACGGAGGATCCAGGCTCGGAGATATGGAGAAGGCTCAAGACCACGACGGATTGGACTTGGAGAATCTTGTTGACCGTGTAGACCCTCCTTTTCTTGTGAAAAATAATGCGAGAAAGTCCCCCGAAGTTCAAACTACCGAAAATCAAGGCCTACGATGGATCGAAAGACCCAGTGGAGCACCTTGACACATTTCGGTCATGGATGGAACTCCATGGAGTCCGGGATGCGATCAAGTGCAGGGCATTCTCATTTACATTGACGGGACCAGCTCGAAAGTGGTTCAGACAGCTAAAGAGGAAGTCGATCGCTTCCTTCCGGGAGTTGGCTCGAGCCTTTGTGACTCAATTCCTCGGAGGAAGGGATCAGCGACGTCCTGCGACACACCTCCTGACCATCAAGCGGCAAGAATGCAACGCGTGAGGGAGTATGTGTCTCGTTTCAACAGCGAGGCCCTACAGATTGAAGGATATACCGATGGGGCAACCCTAACAGCTATCGTAGCCGGACTAAGAGACGAAAAGTTCTTGTGGTCACTAGGTAAGAAAGCTCCAACGAGTTATGTTGAGTTACTAACTAGAGCTCAAAAATACATGAGTGCAGGGGAATTGCTTCGCTCGAGACGTGCGCCAGACGACAAGCAAAGCAGGGACCCGAGAAAAATAAGGGTCGATCGGAGGAAGACCGAAGCGACTCTCGAAAGCGAAAGCACGAGGAGCGGTCTGACGTCAGCGAGAAATCCATGAGGAAGGGTTTGCCACCGAGCAGGTTTGAGCGGTACACCCCGACAAGCGTACCTATCGAGCAGATCCTGATGGAGGTACGCGACAAAAATATCCTTAAATGGCCAGCTAAGTTGAAGGCAGGGTCCCATAGGAGGAATAAGGACAAATACTGTCAATTCCACCGCGACCATGGACATTCAACTTCAGATTGCTACGACCTAAAGGAGGCCATAGAAGCATTGATCCAGATCGGACAACTGAAAGAATACGTCGGTGGAAGTGGGCGACGTGAGACTAGGTCGGATTAGCAGGAGCCAAGCAATAAGGGAGGAGGGTCACCCCCTCCCCGAGAAATCCAGACTATTCTTGGGGGATCAGCCGGAGGCGACTCAAATAGAAAGAGGAAGGCGAAGGCCCGGGCCGCCCGGTCCCCGCCGGCCGACTGGGAGGTTTGTTCCACTTCTCTATCTAACGAGATTGTTAGTTTTTCAGAAGGGGAAGCAGTCAAATTGCACCAGCCTCATAACGACGCGTTGGTGATCTCTCTACTGATGGCCAACATCAAGGTCCGTCGTATCCTGGTCGACGAGGCGATTCGGCGACGTATTATCCTTAAGTGCCTATGACGCCATGAAGATAGGACGAGATCGGCTCAAGGTTAGCATATCTCCCTTAGTGGGATTCGGGGGAAGTAAGGTGTATCCCGAGGGGAGCATTGAACTTCCAGTGACGTTTGGCGGTGGATCGACATGTGTAACGACTATGGTAGAGTTCCTGGTGGTAAATCACGACTCAACCTATAATGCCATCTTAGGACGTCCCACGATACATGCTATGAAGGCAGTAGCTTCGACTTACCACCGATATCTTTGAAATTCCCAACTCCAAATGAGTCGGGATAGTATATGGAGAACAACAAATGTCTCGGGAATGCTACCACAATGCTATGAGAGAATCAAACGGGGAAGTCGAAGAGGTGGCAGCCATAGAAGGGCATCCAGAAAAGTTTGGCGGTGCAGGAGAGGCCGAGATGGACATTGACATCTCGCACCGCATCGGCCGAACCGTGGCCGTCGAGGATGACACGGAGGAACTGCCCACATTCGAGCGAGGCGAACTCGCCGGCTACCGAGTCTCTACAATCGCTATCTCGAGCGATGTGTGAACATTGGAACCAAGCTGTCACCTGACCAGAGAGCGAATCTTATCGAGTTTCTCCAAAGGAATGTCGATGTATTCGCATGGAAGACATGTGATATGCCAGGCATAGATCCAAAGGTGATCACACACCGATTGAATGTCGGCCAGAGACCGCAAGCTCTGTTCGATGAAACGACGGGCCTTCAACCACGCCGAAATGAGATTGTAGCCGAGCAAGTCAAGGATCTCTTGAGACCGAGTTCATCCGGGAAGTTAATTATCCCCAGTGGCTTTCCAACGTGGTACTGGTGAAAAAGGCTAACGGGAAGTGGCGAATGTGCGTAGATTTCACCGACCTGAACAAAGCGTGTCCAAAGGACAGCTTCCCGCTACCAAGGATCGATCAGCTGGTAGATGCGACGAAGGCCACGAAATGCTCAAATTTTCATGGACGCTGCATCTCGGGTATAATCAAATACGGATGTACACTCCAGATCAGGAGAAGACATCCTTCATTACTAGCAGAGGATTGTATTGCTACAACGTTATGCCCTTCGGGTTAAAAAACGCGGGGGCAACATATCAACGACTAGTTAACAAGATGTTTTCTCATCTTATTGACAGGAGTATGGAGGTCTACGTCGATGACATGCTCGTCAAGAGTAAACATGCTGATCTACACCAGATCGACCTGGCGGATGCCTTCGCAACGTTACTTTAAGTACCGATGATGAAGTCAATCCCAAAGAAATGCGCTTTCGGAGTAACTTTTGGTAAGTTCTTAGGGTTCATGGTCAACAAAAGAGGAATCGAGGCGAACCCCAACAAAATCCGAGCAATTTTGGAGATGGAGTCTCCAAAAACTATGAAGCAGCTGCAGAGTCTGAATGGAAAGATCGCAGCGCTAAATCGCTTCGTAAGTAGAGCGACAGATAAATGTCTTCCATTTTTTAAACTCTTACGCAAGAAAGCTAATTTTGAATGGACGGACGAATGCGAACAGGCATTTGAGTCGCTAAAAAAATACTTTAGTTTGACTCCATTCATTGTCAAACCAAACGCCAGGATGAGCTCTCGCTCTTGTACCTAGCTACCTCCGACATCGCTGTAAGTTCCGTCCCCGATAAAGGAGGTAGACGGCCGACACCCCCGCCTACTACACGAGCAAGTCCATGATGGGGGCGAGTCCGGATATCCGCAGTAGAGAAGTTGGCCTTGGCCTTAGTAACTTCGCACGGAGACTTTGCCTCTTATTTTCAAGCTCATAAGATATCGATCGACCAACTATCCATTGAGACAGTTCTACAAAAGCCGAGGCTTCCTGACGATCGATGAAATGGGGTGGAACTCAATGAGTATGACATCTCGCTTTCGACCTCGAACCGCCATGAAAGGGCAAGTCAGAGCAGATTTTGTAGCGAGATGACCCCTTCGCAGGAGATAAATTTAGTCCAACTACGTATGACGATCTACCTTGGCGATCAGACGTCGATGGATCATCTAACGATGCGTGGATGCGGAGCGAGATTGCTTATGATATCTCCGGACGAGGAAAGGTTCGAGTATGCCTTAAGGTTCAAGTTTCGAGCGTCGAACAACGAAGCAGAGTATGAGGCATTGCTAGCAGGGCTGAGAATCGCCAAACTTTTCGAGGTAAAAAACTTGATCATTCTAAGTGACTCTCAACTTGTCGTGAACCAGGTAGCGGAAGCATATCAGGCAAAAGAACAGCGCATGGTTGCCTACCTAGCCAAGGCAAAACAGTACCTGGGGATGTTCGATAAGTTCGAAATCAGACGGATCCCAAGATCTGAGAATGCCAACGCTGACTCGCTCGCAAGATTGGCCGCGACATACGACAATCGAAGCTACGAGAGAGAACCGCCCCGGTTGAGATCTTGGATGAACCAAGTGTCGAAGAGAGTGAAGTCATGGAGTTGGATGGTACGTCCACCGAGCAGCGAACCTGGATATCCCCTTTGGTCGAGTTCCTTAAGGAGGGGAGACTCCCTTCCGACAAACTTGAAGCACGTCGGCTAAAGTATAAGGCGGCGAGATATGTCCTACAAGACCATAAGTTATATCGGAGAAGCTACTCTATGCCGCTCCTCAGATGTCTCGAGCCTCGACGGCGACATATGTCTTACGGGAGATACACGAAGGAATATGCGGTAATCACTCTGGCGCTCGGTCTCTTGCGCGCAGGCAATGCAATGCGGCGGGCTACTCGCCCACGATGCATGACGATGCACGAACGTTCGTCAAGTCGTGTGACCAATGCCAACGGTTTGCGCATGTAATCTGAGACAACCTCCTCAACCGCTCACCACAGGTGTGATGAGTCCCCGGCCCTTCGCTCGGTGGGGTAGACCTCATCGGACCTCTCCCGCAGGTAAGGGACAAACAAAGTTCGCAGAGATCGCAGTGACTACTTTACGAAGTAAGGCAGAGGCAGAGGCGCCGCAACTATTACCGAGAAAAAGGTGACTAATTTCATATGGCGAGACATCATATGCCGATTCGGCATACCTTATGCCTTAGTGATGAGATAACGGATGTCAATTTGACAATGAAGCATTCCAAAGTTTTGCTCGGAGTTAAATATCAAGCACTTCTTCTCTTCTCCACCCCACCCACAAGCCAACTGGTCAAGTGGAAGCGATGAATAAGATCCTCAAGAGAAACCTGAAGACCAAGTTGGAAGGGTTAAAGGGCTCATGGGCGGAGGAATTACCTAACGTATTATGGGCCTACAGAACGACGTCTCGAAATTTGACTGGAGAGACTCCTTTTTCCCTCTCGTTCGGTACCGAGGCTGTTATCCCAGTGGAGATTGGACTCCCGTCTCCCCGGGTAGAACAGTTTGACCCAAGTATGAATCCTGATTCCCTGAGTCTCCACCTAGATCTATTGGAAGAACGGAGGGAAAAAGCCCGGTTGCGGACAGAAGAGTACAAGTGTAGGGTCGCTCGGTACTACAACTCCCGTGTGAAGCAACGTAGCTTCAGCGACGGTGACCTCGTACTCCGCCGTGTTATGCAGAACACCAGAGATCCGACCTCGGGCGCTTTGGGTCCCAATTGGGAAGGCCCATACAAAATTACAAGGATAGTTCGTCCTGGAACGTATGAGATTGTTGACATGAGCGGAAAACGGATGCCACACCCGTGGAATGCAGAGCATCTAAAAATTTATTATCCGTAGTACTGTAATTCTTTTCTTTGTTTTGTTTTGTATTCAGATTTGTTTGTTATCATTAATGTCAAACGTTCTACTCAAGCAATTTTCTTTGAATCAAAACTGCGTGAGTGGGGGTAGGGACGTTGCAATAAAGATAGAGCTCAATCAAGACACAATAAGAGTACAAACAAAAGAAGTCCATTAAAAGAGATACAAGATACATGAAAGAGATACAAAAAAAAAAAAAAAAGAAAGAAGACAATCAAAGACAACGCTAATTCGACTTAAGTACTCAGATGCGTCTAGGGGTCAGGCAGTTGGTCCATGGAGATGTCGTCGAGGAAGTTCTCGTCTAGAACCACATTCTCCAGAGCAGAAGCTGGACCCCCAGACCCAGAAGTTTGGCCGATGTCAAATCCAGGGGGATTACAAGCCTCAATGCACTCCAAGAAGGAAGATTTCACCCATGCCAAATCAGTCTCAGGATGCCGCTCTCGAACCTTCCGGATCGACCAATTTACGCCGCAAAGCATAGCTCTATTCGAGAAGTCATTGTACGCATCAGAACGCTTGAAGGCTTCGGTCAGGTAGCCAATGTCGTTGAGCTTATCTTCGACCCCTTTCAGTTGAGATCGGAGTGAGGATAGCTCAGACCGAAGAGAGGACAACTCACCTTCAGTACGCGTATGATAGTCCTGATGCTCAGCCTGTAGAGAGTCGAATCTCGCTTGCAAAGATTGAAGAGATCACTGCCGCTTGCTTGGCATGAAGGAATTGGGCTTGCTCCAACTCAACCCGTGAGACGCAGATTCAGCGCGGAGGTGGATTTGTGTTCGCTCGACATACGACGAGAGGCCAAGGTTGTGAGAATGAAAGCCTGCACATAGAAGACAAAATTAGCAGAAAGTAAAGAAGAGAAGAGAGGTGATGAAAAAAGGGCGCTCACCTCGCGAGTGTAATGTATTGCGGCGTTGAGTAGACTCGGGCGTGATTGACATCAAAGCGCTCGGAAGAACCACGGGAGGAGCCACCGCATCGAAAGGCCACCCCATAGAGCGGGCGGCTCGCTCCACCTCAACGATCGTATCAAAAGGAGAATCATAAGGTCCAAAGTAGGTGAGGCGGAGAGCGCGCTCGCCGCCGATATCCCCGAGAGGATCAGGTTGGTCAGACCTACTTCCTAGATTGGTAGGAGGAGGGACAGGATCAGGTAAGATCTTCGGGAAAGAGGAACGTGCGGGGGACGATCGCCTGCAAGGACGTCTGGTGGCACGATTATCGATGTTTGAAACGTGACTGGCTCGAGGGACGCCACCAGTTACCGCAAGCTCCCGTTCGGTCAGGAGCTCCTCCTCTTGTTCCACCAAGTTCGACGTCATCTCTGGTAGAAAGAGAGTATCGTGAGAGAATGCAATAAGGAGATGTCGTGCAAAAAGCATTGTAAAAGGAAAGCCTAACCTTCGGGTGTGTCAGTCTGAGGAGGGATAAGGTTGCACGCTGAAAGGAGTTCGTTCGTAACTAATTCAGGACCCCAACGTCGAGACTCAGCAATCCTCCACGCGGAAGCCCGAAAGGCAAGCACAGTAGGGGTCGGCTCCGGTCTGACGTCAGCTGCCGAGGAAAAAGAAAGTCAATTAGCACAGCGTTAAAGAACGAGAAAAATAAAACCATAAAGCAGAGTCGTAAACGACAGGGTAACGGTCTCGTTCGCGCATCAAAAACGGACTCGCCTAACGTTCCGAAGTTGGTTGGAACTCGGAGGGAAGACCCTGCCTCGTCCGGACACAGCCAAAGCCCGCCCACAAAAAACGATGGTTTCTTCCAGTCTTTGACTGATTTGGGCTCCTTGACGATAGCCTCAACATAGGACGGGGGACAGGTATAGTAGAAGGGCTTGGATCTGTCTTTTTGTTTGAAGATATGAAAGGAAAGGAAGTCAATGGCCGACATATGGGAGTCGGGTTCCAGATCGATGCCAAAGGACACAACATCCCATGAGCGAGCACCAGGAGTTCGGTAATATCTGAAAAGGTGCCAATCTCGTGAGAGTAAGGAAATTCTGAACTAGGGAATGAGGGGTAACCTAACTCCACTAGCCAACATGTCGGGATAGAAAGCAACCTCTCCTGAGGGAGGGGAACCAGGTTCCTCTCCTCTCCTGGGAACCCTCATAGTGACGTAGTCAGGAATACTGTAAAAAGAACGAAGCTCTCCTAAAGCGGAGTCAGTAATCGTTCTAACTCTACTAGGGGCTCTACCAGTCAGACCCCGAGAAATTCGAGGGTTTCGGACTCTAGGGGGTGGGTTAGGATTGAAATCCACATCCTCCAGATCAGAAGAACTGGCGTGGACAGTGAAGGGTGCACTACTAGCCATCGCTCAGAAACGTAAGTGGGGTTACCAGGAAAGGTGCCCTGCCGAAACGCCAAAGAAGTCGGGAGAGAGTATGATCTTGAAACTAAGGTTTTGGAATGGATTGAAGGTGTGAGAATAATGAAACTGAGATGAGCTTTTAAAGCCTCACAGACCCGCCTATCGAGGTGGAAGGAGGATCGTCCAAGGGGTATGTCCACTTACTTCAAGTCTAAACTATAAGAGGAGAACAAGTTAGACTAGAAGTGGGGGCAACTGTTATGGCCAAAAATAGGTTTCGGTTCGACAGCGTAGAAGAGAGGCGAATGAGTGGTCGACCGACTGAAATCGGAGAGTCCAATAACCGCCACCATAGGGAACCGGAGACCGACCCAGGGGGTCTGGTCCGGTCAGCAGCGGCGACCCCCGCGGGGTCGGCTCGACGGAGGCCGACCTCGGGGGTCGGCCTCGCCGAGGTGGGCCGACCCCATGGGGTCGGCTCAACCGAGGTCGACCCCGCGGGCCGGCCCCGGCCGAAGGTGGGTCGATCCTTGAGTCGGCCGCTTAAGGAACCGATCCCAAAGGGTCGGCTCCGACGATTCAAGATCGGAAGCTAACCCCCCAAGGGGGTCAGCACCGATCGAAGATAGGCCGACCTTTATCGCACTCCAGAGGGGATGGCTTCGCGGCTTCAGACCAGTGGCCGACCGCTTTGAGGCCTCGGCTCGATTAAAAAAAGGTCATTATCGCGAATGTTGTTATGACGGATAGAGAGAAAACAAGAAGCGTCGTGAAACGGTTCCTTTCCCGTAACCGCCGTAATTAAGCACGCTCAATTATGGAGAGTAAATAGATAATAAAGCCTTGAAAGACCGTTACAAATATAAGGTCTATATTAACTCGTTGGGAAGCCCAACAAAGGTAAGCAATCATTTGGCCTGTGTTCTAGCTTGAGATTTACTTCTGTGCGAAATTATCCTCTCTAACTCGAGCGTCGGAGTGTGTTTGGCAGAGCACCACACCGGTGTTAGTTTTCTTTCTTGCAGGAGATCGTTGTCCCCAACGATACAAATTTACCGTTGATCCGTCTAACCAAATTCCGGCATCAACAGGTGTGTGGCAGAGCACCACACCGGTGTTAGTTTTCTTTCTTGCAGGAGATCGTTGTCCCCAACGATACAAATTCACCGTTGATCCGTCTAACCAAATTCCGACATCAACAAGGCACAAACAAGAGAATTTATCCTGGAAGCGGAAGAACTACTGAAGCTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACATGCAAACCCTTATGGGTATGTATCCGAAGACATGGAAAGGGATGTTTTATGTCAGCAACAGAAACCAAAGCTCATGGAATTGTTGATCTTGTAGCGGTTGAATAA

mRNA sequence

ATGCCTATTGGTGTTCTAAAAGTACCTTTTCGAAGTCCTGGAGAGGAAGATGCATCATGGGTTGACGTATACGAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGATACCAAAGATTTGTATTTATTTATAAACTCTCCCGGTGGATGGGTAATACCCGGAGTAGCTATTTATGATACTATGAAATTTGTGCAACCAGATGTACAGACAATATGCATGGGATTAGCCGCTTCAATGAGATCATTTATTCTAGTCGGAGGAGAAATTATCAAACAATTTATCCTGGAAGCGGAAGAACTACTGAAGCTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACATGCAAACCCTTATGGGTATGTATCCGAAGACATGGAAAGGGATGTTTTATGTCAGCAACAGAAACCAAAGCTCATGGAATTGTTGATCTTGTAGCGGTTGAATAA

Coding sequence (CDS)

ATGCCTATTGGTGTTCTAAAAGTACCTTTTCGAAGTCCTGGAGAGGAAGATGCATCATGGGTTGACGTATACGAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGATACCAAAGATTTGTATTTATTTATAAACTCTCCCGGTGGATGGGTAATACCCGGAGTAGCTATTTATGATACTATGAAATTTGTGCAACCAGATGTACAGACAATATGCATGGGATTAGCCGCTTCAATGAGATCATTTATTCTAGTCGGAGGAGAAATTATCAAACAATTTATCCTGGAAGCGGAAGAACTACTGAAGCTGCGCGAAACCATCACAAGGGTTTATGTACAAAGAACATGCAAACCCTTATGGGTATGTATCCGAAGACATGGAAAGGGATGTTTTATGTCAGCAACAGAAACCAAAGCTCATGGAATTGTTGATCTTGTAGCGGTTGAATAA

Protein sequence

MPIGVLKVPFRSPGEEDASWVDVYEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIKQFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMSATETKAHGIVDLVAVE

Homology

[Close]

BLAST of Tan0005648 vs. ExPASy Swiss-Prot
Match: Q49KX3 (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. globulus OX=71271 GN=clpP PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.7e-64
Identity = 133/196 (67.86%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIE+D 
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FVQPDV TICMGLAASM SF+LVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy Swiss-Prot
Match: A0A360 (ATP-dependent Clp protease proteolytic subunit OS=Coffea arabica OX=13443 GN=clpP PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-63
Identity = 133/196 (67.86%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLM+YLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRET+TRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy Swiss-Prot
Match: Q3C1K4 (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana sylvestris OX=4096 GN=clpP PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.7e-63
Identity = 132/196 (67.35%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIED+T
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +F+LEAEELLKLRET+TRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy Swiss-Prot
Match: Q33C07 (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tomentosiformis OX=4098 GN=clpP PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.7e-63
Identity = 132/196 (67.35%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIED+T
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +F+LEAEELLKLRET+TRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy Swiss-Prot
Match: P12210 (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum OX=4097 GN=clpP PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.7e-63
Identity = 132/196 (67.35%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIED+T
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +F+LEAEELLKLRET+TRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. NCBI nr
Match: QKV44945.1 (clp protease proteolytic subunit [Heuchera longipetala var. longipetala])

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-63
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRTCKPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTCKPLWVVSEDIERDVFMS 180

[Close]

BLAST of Tan0005648 vs. NCBI nr
Match: YP_009317411.1 (ATP-dependent Clp protease proteolytic subunit [Coccinia grandis] >YP_009560860.1 ClpP [Trichosanthes kirilowii] >YP_009751510.1 clp protease proteolytic subunit [Thladiantha dubia] >YP_009751763.1 clp protease proteolytic subunit [Herpetospermum pedunculosum] >YP_009751847.1 clp protease proteolytic subunit [Indofevillea khasiana] >YP_009752268.1 clp protease proteolytic subunit [Trichosanthes baviensis] >YP_009752352.1 clp protease proteolytic subunit [Bryonia marmorata] >YP_009752437.1 clp protease proteolytic subunit [Trichosanthes tricuspidata] >YP_009752606.1 clp protease proteolytic subunit [Trichosanthes homophylla] >YP_009752860.1 clp protease proteolytic subunit [Baijiania yunnanensis] >YP_009753199.1 clp protease proteolytic subunit [Trichosanthes truncata] >YP_009753283.1 clp protease proteolytic subunit [Nothoalsomitra suberosa] >YP_009753645.1 clp protease proteolytic subunit [Trichosanthes wallichiana] >YP_009753730.1 clp protease proteolytic subunit [Trichosanthes nervifolia] >YP_009753814.1 clp protease proteolytic subunit [Trichosanthes pilosa] >YP_009753899.1 clp protease proteolytic subunit [Trichosanthes lobata] >QIT04075.1 clp protease proteolytic subunit [Luffa aegyptiaca] >QIT05763.1 clp protease proteolytic subunit [Gynostemma burmanicum (nom. inval.)] >QJA16169.1 ATP-dependent Clp protease proteolytic subunit [Siraitia grosvenorii] >AOX48723.1 ATP-dependent Clp protease proteolytic subunit [Coccinia grandis] >AOX48808.1 ATP-dependent Clp protease proteolytic subunit [Coccinia grandis])

HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. NCBI nr
Match: YP_009752945.1 (clp protease proteolytic subunit [Momordica sessilifolia] >QIT06017.1 clp protease proteolytic subunit [Momordica sessilifolia])

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62
Identity = 136/196 (69.39%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPG+AIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. NCBI nr
Match: YP_010156404.1 (clp protease proteolytic subunit [Rodgersia aesculifolia] >QKV45780.1 clp protease proteolytic subunit [Rodgersia sambucifolia] >QQY86927.1 clp protease proteolytic subunit [Rodgersia aesculifolia])

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62
Identity = 137/196 (69.90%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FVQPDV TICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. NCBI nr
Match: YP_009559221.1 (clp protease proteolytic subunit [Barbeya oleoides] >QBA96021.1 clp protease proteolytic subunit [Barbeya oleoides])

HSP 1 Score: 248.4 bits (633), Expect = 3.9e-62
Identity = 134/196 (68.37%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVD+Y                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FVQPDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITR+YVQRT KP+WV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRIYVQRTGKPVWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy TrEMBL
Match: A0A410HFB2 (ATP-dependent Clp protease proteolytic subunit OS=Trichosanthes kirilowii OX=3677 GN=clpP PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy TrEMBL
Match: A0A6H0ERC6 (ATP-dependent Clp protease proteolytic subunit OS=Indofevillea khasiana OX=383665 GN=clpP PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy TrEMBL
Match: A0A2Z2CQQ1 (ATP-dependent Clp protease proteolytic subunit OS=Coccinia grandis OX=387127 GN=clpP PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy TrEMBL
Match: A0A6H0ESZ5 (ATP-dependent Clp protease proteolytic subunit OS=Herpetospermum pedunculosum OX=386182 GN=clpP PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. ExPASy TrEMBL
Match: A0A6H0ESA6 (ATP-dependent Clp protease proteolytic subunit OS=Trichosanthes tricuspidata OX=654837 GN=clpP PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 137/196 (69.90%), Postives = 142/196 (72.45%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGEEDASWVDVY                 EISNQLIGLMVYLSIEDDT
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVIPGVAIYDTM+FV+PDVQTICMGLAASM SFILVGGEI K      
Sbjct: 61  KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KPLWV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. TAIR 10
Match: ATCG00670.1 (plastid-encoded CLP P )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 125/196 (63.78%), Postives = 136/196 (69.39%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIGV KVPFRSPGE D SWVD+Y                 EISNQLI LM+YLSIE DT
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIK------ 120
           KDLYLFINSPGGWVI G+AIYDTM+FV+PDVQTICMGLAAS+ SFILVGG I K      
Sbjct: 61  KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120

Query: 121 ------------------QFILEAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMS 156
                             +FILEAEELLKLRETITRVYVQRT KP+WV      +  FMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180

[Close]

BLAST of Tan0005648 vs. TAIR 10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2 )

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 0


Query: 1   MPIGVLKVPFRSPGEEDASWVDVY-----------------EISNQLIGLMVYLSIEDDT 60
           MPIG  +VP+R+  E    WVD++                 E SNQ++  M+YL   DD+
Sbjct: 68  MPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDS 127

Query: 61  KDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFILVGGEIIKQFIL-- 120
           + +Y+++N PGG + P +AIYDTMK ++  V T C+GLA ++  F+L  GE   +F +  
Sbjct: 128 RRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPL 187

Query: 121 ---------------------EAEELLKLRETITRVYVQRTCKPLWVCIRRHGKGCFMSA 153
                                EA+EL ++R+ +     + T +P     +   +    +A
Sbjct: 188 SRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNA 247

[Close]

BLAST of Tan0005648 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18
Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 25  EISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAAS 84
           +++N ++  ++YL   D TKD+ +++NSPGG V  G+AI+DTM+ ++PDV T+C+GLAAS
Sbjct: 134 DMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAAS 193

Query: 85  MRSFILVGGEIIKQFIL-----------------------EAEELLKLRETITRVYVQRT 144
           M +F+L  G   K++ L                       +A E+L  +  +       T
Sbjct: 194 MGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHT 253

Query: 145 CKPLWVCIRRHGKGCFMSATETKAHGIVD 151
            + L    +   +  FMSA E K +G++D
Sbjct: 254 GQSLEKINQDTDRDFFMSAKEAKEYGLID 282

[Close]

BLAST of Tan0005648 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 88.2 bits (217), Expect = 6.3e-18
Identity = 46/154 (29.87%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 25  EISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAAS 84
           + S+ ++  ++YL  E+ +K +++++NSPGG V  G+AIYDTM++++  + TIC+G AAS
Sbjct: 68  DTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAAS 127

Query: 85  MRSFILVGGE-----------------------IIKQFILEAEELLKLRETITRVYVQRT 144
           M S +L  G                          K   +  ++++++ + +  +YV+ T
Sbjct: 128 MASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHT 187

Query: 145 CKPLWVCIRRHGKGCFMSATETKAHGIVDLVAVE 156
            +PL V      +  FM+  E KA GI+D V  E
Sbjct: 188 GQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of Tan0005648 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 75.5 bits (184), Expect = 4.2e-14
Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 30  LIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMKFVQPDVQTICMGLAASMRSFI 89
           +I  ++ L  ED  +D+ LFINSPGG +  G+ IYD MK  + DV T+C+GLAASM +F+
Sbjct: 110 VISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFL 169

Query: 90  LVGGEIIKQFIL-----------------EAEELLKLRE------TITRVYVQRTCKPLW 149
           L  G   K++ +                   E  +++RE       + +++ + T KP  
Sbjct: 170 LASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPES 229

Query: 150 VCIRRHGKGCFMSATETKAHGIVDLV 153
                  +  F++  E K +G++D V
Sbjct: 230 EIESDTDRDNFLNPWEAKEYGLIDAV 255

The following BLAST results are available for this feature:

BLAST of Tan0005648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KX3	9.7e-64	67.86	ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. glo...	[more]
A0A360	1.3e-63	67.86	ATP-dependent Clp protease proteolytic subunit OS=Coffea arabica OX=13443 GN=clp...	[more]
Q3C1K4	3.7e-63	67.35	ATP-dependent Clp protease proteolytic subunit OS=Nicotiana sylvestris OX=4096 G...	[more]
Q33C07	3.7e-63	67.35	ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tomentosiformis OX=4...	[more]
P12210	3.7e-63	67.35	ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum OX=4097 GN=c...	[more]

BLAST of Tan0005648 vs. NCBI nr


Match Name	E-value	Identity	Description
QKV44945.1	4.6e-63	69.90	clp protease proteolytic subunit [Heuchera longipetala var. longipetala]	[more]
YP_009317411.1	2.3e-62	69.90	ATP-dependent Clp protease proteolytic subunit [Coccinia grandis] >YP_009560860....	[more]
YP_009752945.1	3.0e-62	69.39	clp protease proteolytic subunit [Momordica sessilifolia] >QIT06017.1 clp protea...	[more]
YP_010156404.1	3.0e-62	69.90	clp protease proteolytic subunit [Rodgersia aesculifolia] >QKV45780.1 clp protea...	[more]
YP_009559221.1	3.9e-62	68.37	clp protease proteolytic subunit [Barbeya oleoides] >QBA96021.1 clp protease pro...	[more]

BLAST of Tan0005648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A410HFB2	1.1e-62	69.90	ATP-dependent Clp protease proteolytic subunit OS=Trichosanthes kirilowii OX=367...	[more]
A0A6H0ERC6	1.1e-62	69.90	ATP-dependent Clp protease proteolytic subunit OS=Indofevillea khasiana OX=38366...	[more]
A0A2Z2CQQ1	1.1e-62	69.90	ATP-dependent Clp protease proteolytic subunit OS=Coccinia grandis OX=387127 GN=...	[more]
A0A6H0ESZ5	1.1e-62	69.90	ATP-dependent Clp protease proteolytic subunit OS=Herpetospermum pedunculosum OX...	[more]
A0A6H0ESA6	1.1e-62	69.90	ATP-dependent Clp protease proteolytic subunit OS=Trichosanthes tricuspidata OX=...	[more]

BLAST of Tan0005648 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00670.1	1.8e-60	63.78	plastid-encoded CLP P	[more]
AT1G12410.1	2.6e-19	28.65	CLP protease proteolytic subunit 2	[more]
AT1G02560.1	6.3e-18	32.21	nuclear encoded CLP protease 5	[more]
AT5G23140.1	6.3e-18	29.87	nuclear-encoded CLP protease P7	[more]
AT1G66670.1	4.2e-14	30.82	CLP protease proteolytic subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 76..93 score: 62.36 coord: 131..150 score: 36.5 coord: 45..65 score: 58.33
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 25..152 e-value: 3.53566E-50 score: 156.448
None	No IPR available	GENE3D	3.90.226.10		coord: 99..155 e-value: 3.6E-6 score: 28.6
None	No IPR available	GENE3D	3.90.226.10		coord: 20..98 e-value: 9.8E-23 score: 82.7
None	No IPR available	PANTHER	PTHR10381:SF15	CHLOROPLASTIC ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1	coord: 21..154
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 25..102 e-value: 2.2E-26 score: 92.9
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 21..154
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 25..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005648.1	Tan0005648.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity