Tan0005608 (gene) Snake gourd v1

Overview


Name	Tan0005608
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG02: 92754231 .. 92755043 (-)
RNA-Seq Expression	Tan0005608
Synteny	Tan0005608

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCACAATTTTAAAATGATACAACAACAACAATGCCAAAGAACTTGATCAAACTAAAGAATCATGCTCCGGTGGCGGCGGCGGCGGCGGCAATGGGAAGAAATTCCAACCAAAGTGGCGGCCGGTGTCGAAAGCACCCAAAACACAAGCAATCACCAGGCGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGTCCATTACAGGCTCCTCCTCCACCACCAAAACAACCTCTACAAAAAAGGCCTCTTTTTCATCTTCTTCTTCATTGTCATCTCTTTCCTCTTATTACTCTTCTTCTTCTTCCCCTTCTTCTTCCTCTTCCCCATTTTTTCCAAGAAACAAACCAATTTCTTCCATGTCTTTGCTCTTCAAACGAAGATCAACCACTAATTTCTTGACCACAAGTAGATCTCTAGCTGATGGAGATCATCGAAACAAGAAATCCCATCATGGGTTTTGGTCCAAGTTGATGATGAATCGAAGAGGAAAAGAGATCGTTGAAGAAACTTTCAGACGTTCAACTTCTACAACAATGGCTACCTTAGTGAACAATTTGGATTAATTGATTAATTAATCTCTTTTTATGAATTCTTATTATATTTTTCTCATATATTAGATAGATCTAGCTCTTATGTAACTTTTTCTAGTTTAAAAAAAAAAAACAATGAAATACGCAAAGAGTTTCTTTTTATCTGTGGGATCCAAGAACTTCCAAACAAAAACAGGTCCCATTTTTTGGTTCTTGTTTTTTGTTCAATGCTTGTGTAAATGTTCGAGTTGATCATGTAGTTGTTTGAATTATTAA

mRNA sequence

CTTCCACAATTTTAAAATGATACAACAACAACAATGCCAAAGAACTTGATCAAACTAAAGAATCATGCTCCGGTGGCGGCGGCGGCGGCGGCAATGGGAAGAAATTCCAACCAAAGTGGCGGCCGGTGTCGAAAGCACCCAAAACACAAGCAATCACCAGGCGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGTCCATTACAGGCTCCTCCTCCACCACCAAAACAACCTCTACAAAAAAGGCCTCTTTTTCATCTTCTTCTTCATTGTCATCTCTTTCCTCTTATTACTCTTCTTCTTCTTCCCCTTCTTCTTCCTCTTCCCCATTTTTTCCAAGAAACAAACCAATTTCTTCCATGTCTTTGCTCTTCAAACGAAGATCAACCACTAATTTCTTGACCACAAGTAGATCTCTAGCTGATGGAGATCATCGAAACAAGAAATCCCATCATGGGTTTTGGTCCAAGTTGATGATGAATCGAAGAGGAAAAGAGATCGTTGAAGAAACTTTCAGACGTTCAACTTCTACAACAATGGCTACCTTAGTGAACAATTTGGATTAATTGATTAATTAATCTCTTTTTATGAATTCTTATTATATTTTTCTCATATATTAGATAGATCTAGCTCTTATGTAACTTTTTCTAGTTTAAAAAAAAAAAACAATGAAATACGCAAAGAGTTTCTTTTTATCTGTGGGATCCAAGAACTTCCAAACAAAAACAGGTCCCATTTTTTGGTTCTTGTTTTTTGTTCAATGCTTGTGTAAATGTTCGAGTTGATCATGTAGTTGTTTGAATTATTAA

Coding sequence (CDS)

ATGCCAAAGAACTTGATCAAACTAAAGAATCATGCTCCGGTGGCGGCGGCGGCGGCGGCAATGGGAAGAAATTCCAACCAAAGTGGCGGCCGGTGTCGAAAGCACCCAAAACACAAGCAATCACCAGGCGTTTGCTCTGTTTGTCTAAGAGAAAAGCTCTGTAATTTGTCCATTACAGGCTCCTCCTCCACCACCAAAACAACCTCTACAAAAAAGGCCTCTTTTTCATCTTCTTCTTCATTGTCATCTCTTTCCTCTTATTACTCTTCTTCTTCTTCCCCTTCTTCTTCCTCTTCCCCATTTTTTCCAAGAAACAAACCAATTTCTTCCATGTCTTTGCTCTTCAAACGAAGATCAACCACTAATTTCTTGACCACAAGTAGATCTCTAGCTGATGGAGATCATCGAAACAAGAAATCCCATCATGGGTTTTGGTCCAAGTTGATGATGAATCGAAGAGGAAAAGAGATCGTTGAAGAAACTTTCAGACGTTCAACTTCTACAACAATGGCTACCTTAGTGAACAATTTGGATTAA

Protein sequence

MPKNLIKLKNHAPVAAAAAAMGRNSNQSGGRCRKHPKHKQSPGVCSVCLREKLCNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKPISSMSLLFKRRSTTNFLTTSRSLADGDHRNKKSHHGFWSKLMMNRRGKEIVEETFRRSTSTTMATLVNNLD

Homology

[Close]

BLAST of Tan0005608 vs. NCBI nr
Match: XP_008444863.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 9.8e-33
Identity = 112/190 (58.95%), Postives = 131/190 (68.95%), Query Frame = 0


Query: 1   MPKNLI----KLKNHAPVAAAAAAMGRNSNQSGGR------CRKHPKHKQSPGVCSVCLR 60
           MPKN +    KLK H     AAA M R+SN  G R      CRKHPKHKQSPGVCSVCLR
Sbjct: 1   MPKNNLMITSKLKYH-----AAAPMARSSNHGGCRGGGVSQCRKHPKHKQSPGVCSVCLR 60

Query: 61  EKLCNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKP-IS 120
           EKLCNL+IT +  ++ ++S+K     SSSSLSSLSSYY SSSSPSSSSSP+F   KP IS
Sbjct: 61  EKLCNLTITKTPPSSSSSSSKILPSFSSSSLSSLSSYY-SSSSPSSSSSPYFSTKKPSIS 120

Query: 121 SM-SLLFKRRSTTNFLTTSRSLAD----GDHR--NKKSHHGFWSKLMMNRRGKEIVEETF 173
           SM SLLFKRR +++  ++S +  +    G HR  NK  H GFWSKLMMNRRGKEIVEE  
Sbjct: 121 SMSSLLFKRRWSSSLSSSSTATTNTNFFGHHRNNNKSGHDGFWSKLMMNRRGKEIVEEIT 180

[Close]

BLAST of Tan0005608 vs. NCBI nr
Match: XP_031736533.1 (uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >KGN62712.1 hypothetical protein Csa_021850 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-28
Identity = 107/195 (54.87%), Postives = 124/195 (63.59%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAA------AAMGRNSNQSG-GRCRKHPKHKQSPGVCSVCLREKL 60
           MPKN +K    AP+A ++      A +G     +G   CRKHPKHKQSPGVCSVCLREKL
Sbjct: 1   MPKNNLKYHAAAPMARSSNHGRCRAGVGVVGGGNGSSHCRKHPKHKQSPGVCSVCLREKL 60

Query: 61  CNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKP-ISSM- 120
           CNL+IT + S+  ++S+K     SSSSLSSLSSYY SSSSPSSSSSP+    KP +SSM 
Sbjct: 61  CNLTITRTPSS--SSSSKILPSFSSSSLSSLSSYY-SSSSPSSSSSPYSSTKKPSVSSMS 120

Query: 121 SLLFKRR------------STTNFLTTSRSLADGDHR--NKKSHHGFWSKLMMNRRGKEI 173
           SLLFKRR            + TNF T     AD  H   N KSHHGFWSKLMMNRRGKEI
Sbjct: 121 SLLFKRRWSSSSSSSTTATTNTNFFTA----ADAHHHRINNKSHHGFWSKLMMNRRGKEI 180

[Close]

BLAST of Tan0005608 vs. NCBI nr
Match: KAG6598702.1 (hypothetical protein SDJN03_08480, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-26
Identity = 96/170 (56.47%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAAAAMGRNSN-----QSGGRCRKHPKHKQSPGVCSVCLREKLCN 60
           MPKNL KLK H   AA AAA GRN N      +  RCRKHPKHKQSPGVCS+CLREKL N
Sbjct: 1   MPKNLSKLKRHT-AAATAAAKGRNPNHGSDSSNSSRCRKHPKHKQSPGVCSLCLREKLSN 60

Query: 61  LSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKPISSMSLLF 120
           L+IT      +T     A+  SSSSLSSLSSYY SSS PSSS+SP+FPR K  SS+S LF
Sbjct: 61  LTITKPVMAAET-----AASVSSSSLSSLSSYY-SSSFPSSSASPYFPRTK--SSISSLF 120

Query: 121 KRRSTTNFLTTSRSLADGDHRNKKSHHGFWSKLMMNRRGKEIVEETFRRS 166
           KRRST                 + ++ GFWSKLMMNRR K++V  +  RS
Sbjct: 121 KRRSTP---------------TQATNPGFWSKLMMNRRPKQLVSTSSLRS 146

[Close]

BLAST of Tan0005608 vs. NCBI nr
Match: KAG7029644.1 (hypothetical protein SDJN02_07984, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-25
Identity = 96/170 (56.47%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAAAAMGRNSNQSGG-----RCRKHPKHKQSPGVCSVCLREKLCN 60
           MPKNL KLK H   AA AAA GR  N   G     RCRKHPKHKQSPGVCS+CLREKL N
Sbjct: 1   MPKNLRKLKGHT-AAATAAAKGRKPNHGSGSSNSSRCRKHPKHKQSPGVCSLCLREKLSN 60

Query: 61  LSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKPISSMSLLF 120
           L+IT      +T     A+  SSSSLSSLSSYY SSS PSSS+SP+FPR K  SS+S LF
Sbjct: 61  LTITKPVMAAET-----AASVSSSSLSSLSSYY-SSSFPSSSASPYFPRTK--SSISSLF 120

Query: 121 KRRSTTNFLTTSRSLADGDHRNKKSHHGFWSKLMMNRRGKEIVEETFRRS 166
           KRRST                 + ++ GFWSKLMMNRR K++V     RS
Sbjct: 121 KRRSTP---------------TQATNPGFWSKLMMNRRPKQLVSTLSLRS 146

[Close]

BLAST of Tan0005608 vs. NCBI nr
Match: XP_022131967.1 (uncharacterized protein LOC111004952 [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 5.8e-25
Identity = 98/172 (56.98%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAAAAMGRNSNQSGGRCRKHPKHKQSPGVCSVCLREKLCNLSITG 60
           M KNL KLK+HA  AAA A   ++S   GGRCRKHPKH+QSPGVCS+CLREKL  L  T 
Sbjct: 1   MAKNLRKLKDHA--AAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTD 60

Query: 61  SSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSP--FFPRNKPISSMSLLFKRR 120
                 +T+ K A   SSSSLSS+SS YSS+SS SS SSP     R + IS MS LFKRR
Sbjct: 61  YHG---STAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRR 120

Query: 121 ST-TNFLTTSRSLADGDHRNKKSHHGFWSKLMMNRRGKEIVEETFRRSTSTT 170
           S+  N L++SRSLAD          G WSKL++NRRGK   E+T RRS STT
Sbjct: 121 SSANNLLSSSRSLAD----------GLWSKLVVNRRGK---EQTLRRSASTT 154

[Close]

BLAST of Tan0005608 vs. ExPASy TrEMBL
Match: A0A1S3BC83 (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103488084 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.7e-33
Identity = 112/190 (58.95%), Postives = 131/190 (68.95%), Query Frame = 0


Query: 1   MPKNLI----KLKNHAPVAAAAAAMGRNSNQSGGR------CRKHPKHKQSPGVCSVCLR 60
           MPKN +    KLK H     AAA M R+SN  G R      CRKHPKHKQSPGVCSVCLR
Sbjct: 1   MPKNNLMITSKLKYH-----AAAPMARSSNHGGCRGGGVSQCRKHPKHKQSPGVCSVCLR 60

Query: 61  EKLCNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKP-IS 120
           EKLCNL+IT +  ++ ++S+K     SSSSLSSLSSYY SSSSPSSSSSP+F   KP IS
Sbjct: 61  EKLCNLTITKTPPSSSSSSSKILPSFSSSSLSSLSSYY-SSSSPSSSSSPYFSTKKPSIS 120

Query: 121 SM-SLLFKRRSTTNFLTTSRSLAD----GDHR--NKKSHHGFWSKLMMNRRGKEIVEETF 173
           SM SLLFKRR +++  ++S +  +    G HR  NK  H GFWSKLMMNRRGKEIVEE  
Sbjct: 121 SMSSLLFKRRWSSSLSSSSTATTNTNFFGHHRNNNKSGHDGFWSKLMMNRRGKEIVEEIT 180

[Close]

BLAST of Tan0005608 vs. ExPASy TrEMBL
Match: A0A0A0LPJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369140 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 9.3e-29
Identity = 107/195 (54.87%), Postives = 124/195 (63.59%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAA------AAMGRNSNQSG-GRCRKHPKHKQSPGVCSVCLREKL 60
           MPKN +K    AP+A ++      A +G     +G   CRKHPKHKQSPGVCSVCLREKL
Sbjct: 1   MPKNNLKYHAAAPMARSSNHGRCRAGVGVVGGGNGSSHCRKHPKHKQSPGVCSVCLREKL 60

Query: 61  CNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSPFFPRNKP-ISSM- 120
           CNL+IT + S+  ++S+K     SSSSLSSLSSYY SSSSPSSSSSP+    KP +SSM 
Sbjct: 61  CNLTITRTPSS--SSSSKILPSFSSSSLSSLSSYY-SSSSPSSSSSPYSSTKKPSVSSMS 120

Query: 121 SLLFKRR------------STTNFLTTSRSLADGDHR--NKKSHHGFWSKLMMNRRGKEI 173
           SLLFKRR            + TNF T     AD  H   N KSHHGFWSKLMMNRRGKEI
Sbjct: 121 SLLFKRRWSSSSSSSTTATTNTNFFTA----ADAHHHRINNKSHHGFWSKLMMNRRGKEI 180

[Close]

BLAST of Tan0005608 vs. ExPASy TrEMBL
Match: A0A6J1BSJ2 (uncharacterized protein LOC111004952 OS=Momordica charantia OX=3673 GN=LOC111004952 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-25
Identity = 98/172 (56.98%), Postives = 114/172 (66.28%), Query Frame = 0


Query: 1   MPKNLIKLKNHAPVAAAAAAMGRNSNQSGGRCRKHPKHKQSPGVCSVCLREKLCNLSITG 60
           M KNL KLK+HA  AAA A   ++S   GGRCRKHPKH+QSPGVCS+CLREKL  L  T 
Sbjct: 1   MAKNLRKLKDHA--AAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTD 60

Query: 61  SSSTTKTTSTKKASFSSSSSLSSLSSYYSSSSSPSSSSSP--FFPRNKPISSMSLLFKRR 120
                 +T+ K A   SSSSLSS+SS YSS+SS SS SSP     R + IS MS LFKRR
Sbjct: 61  YHG---STAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRR 120

Query: 121 ST-TNFLTTSRSLADGDHRNKKSHHGFWSKLMMNRRGKEIVEETFRRSTSTT 170
           S+  N L++SRSLAD          G WSKL++NRRGK   E+T RRS STT
Sbjct: 121 SSANNLLSSSRSLAD----------GLWSKLVVNRRGK---EQTLRRSASTT 154

[Close]

BLAST of Tan0005608 vs. ExPASy TrEMBL
Match: A0A4S4DSP3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_018810 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-12
Identity = 75/164 (45.73%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 23  RNSNQSGGRCRKHPKHKQSPGVCSVCLREKLCNLSITGSSSTTKTTSTKKASFSSSSSLS 82
           R S + G  C+KHPKH+QSPGVCSVCLREKL  LS T   +TT    TK +S SS SSLS
Sbjct: 7   RRSTKPGIGCKKHPKHQQSPGVCSVCLREKLSQLSTTSRINTT----TKDSSCSSLSSLS 66

Query: 83  SLSSYYSSSSSPSSSSSPFFPRNKPISSMSLLFKRRSTTNFLTTSRSLA------DGDHR 142
           SLSS+YS     SS SSP   R       SL  + +   N L  SRS+A      DG+ R
Sbjct: 67  SLSSHYS-----SSESSPVHDR------FSLGSEAKGLRNVLRKSRSMAVVNRTRDGEGR 126

Query: 143 NK-KSHHGFWSKLMMNRR----GKEIVEETFRRSTSTTMATLVN 176
           +  K   GFWSK +  RR    G  +   T R    TT +T V+
Sbjct: 127 DHGKKKDGFWSKFLRPRRKKIDGGLMHSRTMRERVITTTSTRVH 155

[Close]

BLAST of Tan0005608 vs. ExPASy TrEMBL
Match: F6H0X5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g06400 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-11
Identity = 70/144 (48.61%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 23  RNSNQSGGR------CRKHPKHKQSPGVCSVCLREKLCNLSITGSSSTTKTTSTKKASFS 82
           R+ +Q GGR      CRKHPKH+QSPGVCS+CLRE+L  L     S+++++ ST  AS S
Sbjct: 6   RSRDQMGGRSKSEVLCRKHPKHRQSPGVCSICLRERLSQL-----STSSRSASTTVASAS 65

Query: 83  SSSSLSSLSSYYSSSSSPSSSSSPFFPRNKPISSMSLLFKRRSTTNFLTTSRSLA----- 142
           SSSSLSS SS+YSSS + SS SSP         +        S  N LT SRS+A     
Sbjct: 66  SSSSLSSYSSHYSSSEA-SSCSSPMQRYRFDSDAKGSFSFLLSGKNMLTKSRSVAFVTRM 125

Query: 143 ---DGDHRNKKSHHGFWSKLMMNR 153
              D   RNKKS  GFWSKL+  R
Sbjct: 126 RAGDASQRNKKS--GFWSKLLRPR 141

[Close]

BLAST of Tan0005608 vs. TAIR 10
Match: AT1G35210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 32  CRKHPKHKQSPGVCSVCLREKLCNLSITGSSSTTKTTSTKKASFSSSSSLSSLSSYYSSS 91
           C+KHPKH+QSPGVCS+CL E+   LS+   +++++   +++   +SSS+ SSLSS    S
Sbjct: 31  CKKHPKHRQSPGVCSLCLNER---LSLFIKAASSRRPRSRQILSTSSSTTSSLSS--DGS 90

Query: 92  SSPSSSSSPFFPRNKPISSMSLLFKRRSTTNFLTTSRSLA---DGDHRNK---KSHHGFW 151
           SS SS  SP   R + +       +     +++T SRS+A   D + R K   K++ GF+
Sbjct: 91  SSVSSCPSPIVDRRRYLLMSGGSGRGEKVISWMTKSRSVAYKVDDEKRRKKKTKTNSGFF 150

Query: 152 SKLMMNRRGKE 157
             L+M  + ++
Sbjct: 151 FGLVMGTKKRQ 156

[Close]

BLAST of Tan0005608 vs. TAIR 10
Match: AT1G22470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 4.1e-05
Identity = 38/73 (52.05%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 32  CRKHPKHKQSPGVCSVCLREKLCNL--------SITGSSSTTKT-TSTKKASFSSSSSLS 91
           C+KHPKH+QSPG+CS+CL E L  L        S   SSS  KT +S   AS  S S  S
Sbjct: 41  CKKHPKHRQSPGICSLCLNESLSKLSSEFYDYSSSMSSSSLAKTMSSCSSASSESESDFS 100

Query: 92  S--LSSYYSSSSS 94
           S  +SSYYSS SS
Sbjct: 101 STAISSYYSSVSS 113

[Close]

BLAST of Tan0005608 vs. TAIR 10
Match: AT1G72240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 42/98 (42.86%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 24  NSNQSGG-RCRKHPKHKQSPGVCSVCLREKLCNLSITGSSSTTKTTSTKKASFSSSSSLS 83
           NSN      C+KH KH+QSPG+CS+CL E+L  LS+     T K   T     S+S+S S
Sbjct: 15  NSNSDNNFSCKKHTKHRQSPGICSLCLTERLSKLSLEYYDYTKKAVETATYCGSTSTSSS 74

Query: 84  SLSSYYSSSSSPSSSSSP----FFPRNKPISSMSLLFK 117
           S  S   SSSS SS SSP    +  + K     S LF+
Sbjct: 75  SSVSSCYSSSSVSSCSSPLQYRYREKKKDGKKQSFLFR 112

The following BLAST results are available for this feature:

BLAST of Tan0005608 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005608 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444863.1	9.8e-33	58.95	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo]	[more]
XP_031736533.1	1.9e-28	54.87	uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >KGN62712.1 h...	[more]
KAG6598702.1	5.2e-26	56.47	hypothetical protein SDJN03_08480, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029644.1	1.5e-25	56.47	hypothetical protein SDJN02_07984, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022131967.1	5.8e-25	56.98	uncharacterized protein LOC111004952 [Momordica charantia]	[more]

BLAST of Tan0005608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC83	4.7e-33	58.95	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LPJ0	9.3e-29	54.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369140 PE=4 SV=1	[more]
A0A6J1BSJ2	2.8e-25	56.98	uncharacterized protein LOC111004952 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A4S4DSP3	2.7e-12	45.73	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0188...	[more]
F6H0X5	1.3e-11	48.61	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g06400 PE=4 SV=...	[more]

BLAST of Tan0005608 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35210.1	1.1e-05	35.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22470.1	4.1e-05	52.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G72240.1	2.1e-04	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008004	Protein OCTOPUS-like	PFAM	PF05340	DUF740	coord: 28..112 e-value: 1.9E-5 score: 23.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..82
None	No IPR available	PANTHER	PTHR34046	OS06G0218800 PROTEIN	coord: 25..166
None	No IPR available	PANTHER	PTHR34046:SF7	OS06G0218800 PROTEIN	coord: 25..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005608.1	Tan0005608.1	mRNA