Tan0005555 (gene) Snake gourd v1

Overview
NameTan0005555
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly polymerase 1, putative
LocationLG01: 116872179 .. 116873666 (+)
RNA-Seq ExpressionTan0005555
SyntenyTan0005555
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATATTGACGCAACTCTCATTCTCTTTCCTCCTCATCACTTACCTCACAAGATGATGATCAGATTTCAATGGCAAGTAATCAATATATATATATATATATGTATATGGCTATGAACCCCCTTCATAGCTATAGTTGAATAGATCTAATTGATATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAGGGAGAGTAATTACAAGGGATTTCAGCCCCCGATTTTTGTGTGGATACGTCCCGCCTCTGGTACATATATATCCATATATATATATTTGTTCATTTTCATTTCTCCTCTCTGTAAAGCAACATAATTTGAAAGAAAAAACAAATATAATCTGAGATTCATTTTTCCAACGTTCAGGTATATATAGAGGGAATTGTCCTCTTCCGAATTAAATCGTGATCTGATTCCAACTAATTGCAATTAAATTAATATTGTGTACGTTGAGACGACTGGGGTGTAATTGGATTAATGGGAAGGCGATCAAGATGAAGAAAATTAAAAACGGTGGACCGACGGAGGCGGCAACGGGCAATGGGCAATCTAAGTCAAGAGTCAAATGGGACTCGGAGGGCATTTAATTGAAATACAATGTGAAGACGGAAGAATTGAGAATTTGAAGCCGCGCACCCAAATTTGATGCCATCCACGACTCTGTTGTGTTTACCAACGCACTAATACAATTCCTCTTTTTCTCCTTTCTTTTCTATTAATTCGACGTTCTTTGATCTCTCTACCATATTGTCGATGCCTATATCTATTTCCCTTCTTCTTCTTCTTTTTTTCCCCTATTCTATTTATAATTTATTAATAATAGTCTTTTTTTTTTCTTTTTTTTTAATGTTAAACCAACGCTACGCTACCTAACCCATGCTTAAGTTAATAACTAAGGACTATAGTTTAATTAATTTATCAGATATTTGATTAGGAAATACTTTGTAAAGTCAA

mRNA sequence

CAATATTGACGCAACTCTCATTCTCTTTCCTCCTCATCACTTACCTCACAAGATGATGATCAGATTTCAATGGCAAGTAATCAATATATATATATATATATGTATATGGCTATGAACCCCCTTCATAGCTATAGTTGAATAGATCTAATTGATATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAGGGAGAGTAATTACAAGGGATTTCAGCCCCCGATTTTTGTGTGGATACGTCCCGCCTCTGGTATATATAGAGGGAATTGTCCTCTTCCGAATTAAATCGTGATCTGATTCCAACTAATTGCAATTAAATTAATATTGTGTACGTTGAGACGACTGGGGTGTAATTGGATTAATGGGAAGGCGATCAAGATGAAGAAAATTAAAAACGGTGGACCGACGGAGGCGGCAACGGGCAATGGGCAATCTAAGTCAAGAGTCAAATGGGACTCGGAGGGCATTTAATTGAAATACAATGTGAAGACGGAAGAATTGAGAATTTGAAGCCGCGCACCCAAATTTGATGCCATCCACGACTCTGTTGTGTTTACCAACGCACTAATACAATTCCTCTTTTTCTCCTTTCTTTTCTATTAATTCGACGTTCTTTGATCTCTCTACCATATTGTCGATGCCTATATCTATTTCCCTTCTTCTTCTTCTTTTTTTCCCCTATTCTATTTATAATTTATTAATAATAGTCTTTTTTTTTTCTTTTTTTTTAATGTTAAACCAACGCTACGCTACCTAACCCATGCTTAAGTTAATAACTAAGGACTATAGTTTAATTAATTTATCAGATATTTGATTAGGAAATACTTTGTAAAGTCAA

Coding sequence (CDS)

ATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAG

Protein sequence

MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNASTNNNHNHRRKKGRISPLLLPNPSDSDHIVSKDQHHPDTDTSASSVKKLHRLTSRTAKMAVRSFKLKLSTIYEGTVL
Homology
BLAST of Tan0005555 vs. NCBI nr
Match: XP_022981858.1 (uncharacterized protein LOC111480876 [Cucurbita maxima] >XP_023525127.1 uncharacterized protein LOC111788827 [Cucurbita pepo subsp. pepo] >KAG6608670.1 hypothetical protein SDJN03_02012, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037985.1 hypothetical protein SDJN02_01618, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-65
Identity = 152/198 (76.77%), Postives = 165/198 (83.33%), Query Frame = 0

Query: 1   MGACLSNNNN-----SALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFL 60
           MGACLS+  N     S  PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SS SDSFL
Sbjct: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60

Query: 61  CNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNAST 120
           CNSDRLYYDDFIPPLP D+ LLP+ IYFLLPSSNLHHRL+AS MAALAVKA+LALQNAS 
Sbjct: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120

Query: 121 NNNHNHRRKKGRISPLLLPNPSDSDHIVSKD--QHHPDTDTSAS-SVKKLHRLTSRTAKM 180
           N+    RRKKGR+SPLL  N SDSDHI+SK+  + +   DTSAS SV+KL RLTSR AKM
Sbjct: 121 ND----RRKKGRVSPLL--NLSDSDHIISKEPSKKNAAADTSASPSVRKLQRLTSRRAKM 180

Query: 181 AVRSFKLKLSTIYEGTVL 191
           AVRSFKLKLSTIYEG VL
Sbjct: 181 AVRSFKLKLSTIYEGAVL 192

BLAST of Tan0005555 vs. NCBI nr
Match: XP_022940531.1 (uncharacterized protein LOC111446101 [Cucurbita moschata])

HSP 1 Score: 258.5 bits (659), Expect = 4.7e-65
Identity = 151/198 (76.26%), Postives = 165/198 (83.33%), Query Frame = 0

Query: 1   MGACLSNNNN-----SALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFL 60
           MGACLS+  N     S  PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SS SDSFL
Sbjct: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60

Query: 61  CNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNAST 120
           CNSDRLYYDDFIPPLP D+ LLP+ IYFLLPSSNLHHRL+AS MAALAVKA+LALQNAS 
Sbjct: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120

Query: 121 NNNHNHRRKKGRISPLLLPNPSDSDHIVSKD--QHHPDTDTSAS-SVKKLHRLTSRTAKM 180
           N+    RRKKGR+SPLL  N SDSDHI+SK+  + +   DTSAS SV+KL RLTS+ AKM
Sbjct: 121 ND----RRKKGRVSPLL--NLSDSDHIISKEPSKKNAAADTSASPSVRKLQRLTSKRAKM 180

Query: 181 AVRSFKLKLSTIYEGTVL 191
           AVRSFKLKLSTIYEG VL
Sbjct: 181 AVRSFKLKLSTIYEGAVL 192

BLAST of Tan0005555 vs. NCBI nr
Match: XP_011654294.1 (uncharacterized protein LOC101220453 [Cucumis sativus] >KGN55556.1 hypothetical protein Csa_012182 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 6.5e-59
Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0

Query: 1   MGACLSN-------NNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDS 60
           MG C SN       +++   PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SSTSDS
Sbjct: 1   MGGCFSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNA 120
           FLCNSDRL+YDDFIP LP D  L P+ IYF+LPSSNLHHRL A DMAALAVKATLALQNA
Sbjct: 61  FLCNSDRLFYDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 STNNNH--NHRRKKGRISPLL-LPNPSDS------DHIVSKDQHHPDTDTSASSVKKLHR 180
           STNN H  +++ ++ RISPL  L +P+D       +H +S + +  + +T++SSVKKL R
Sbjct: 121 STNNLHLPHNKGRRRRISPLFDLDSPNDQQNEHEHEHALSTNSNSKN-NTTSSSVKKLQR 180

Query: 181 LTSRTAKMAVRSFKLKLSTIYEGTVL 191
           LTSR AKMAVRSFKL+LSTIYEGTVL
Sbjct: 181 LTSRRAKMAVRSFKLRLSTIYEGTVL 205

BLAST of Tan0005555 vs. NCBI nr
Match: XP_038896630.1 (uncharacterized protein LOC120084892 [Benincasa hispida])

HSP 1 Score: 238.0 bits (606), Expect = 6.5e-59
Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 0

Query: 1   MGACLSN-----NNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFL 60
           MGACLSN       +S  PPPPTAKVI+LQG LREYP+PISVSRVLQTE+S SSTSDSFL
Sbjct: 1   MGACLSNCLIIPKASSVPPPPPTAKVINLQGDLREYPVPISVSRVLQTEDSSSSTSDSFL 60

Query: 61  CNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNAST 120
           CNSDRLYYDDFIPPLP D  L P+ IYFLL SS LH RL ASDMAALAVKATLALQN ST
Sbjct: 61  CNSDRLYYDDFIPPLPLDHQLQPNEIYFLLHSSKLHQRLTASDMAALAVKATLALQNVST 120

Query: 121 NNNHNHRRKKGRISPLLLPNPSDSDHIVSKDQHHP---------DTDTSASSVKKLHRLT 180
            N+   RR KGRISP+LL +   SD   +KD+H P          T +++SSV++L RLT
Sbjct: 121 -NDPPLRRNKGRISPILLSSSEYSDDRSAKDEHAPSINSKKNSASTTSASSSVRRLQRLT 180

Query: 181 SRTAKMAVRSFKLKLSTIYEGTVL 191
           SR AKMAVRSFKL+LSTIYEG VL
Sbjct: 181 SRRAKMAVRSFKLRLSTIYEGAVL 203

BLAST of Tan0005555 vs. NCBI nr
Match: XP_008453039.1 (PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 8.5e-59
Identity = 139/209 (66.51%), Postives = 159/209 (76.08%), Query Frame = 0

Query: 1   MGACLSN-------NNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDS 60
           MG CLSN       +++   PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SSTSDS
Sbjct: 1   MGGCLSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNA 120
           FLCNSDRLY+DDFIP LP D  L P+ IYF+LPSSNLHHRL A DMAALAVKATLALQNA
Sbjct: 61  FLCNSDRLYFDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 STNNNH-----NHRRKKGRISPLL-LPNPSDS------DHIVSKDQHHPDTDTSASSVKK 180
           STNN H      ++ ++ RISPL  L +P+D       +H +S + +  +   S+SSVKK
Sbjct: 121 STNNLHLSHLPRNKGRRHRISPLFDLDSPNDQQHEHEHEHALSINSNSKNNTASSSSVKK 180

Query: 181 LHRLTSRTAKMAVRSFKLKLSTIYEGTVL 191
           L RLTSR AKMAVRSFKL+LSTIYEGT L
Sbjct: 181 LQRLTSRRAKMAVRSFKLRLSTIYEGTDL 209

BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1J381 (uncharacterized protein LOC111480876 OS=Cucurbita maxima OX=3661 GN=LOC111480876 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 152/198 (76.77%), Postives = 165/198 (83.33%), Query Frame = 0

Query: 1   MGACLSNNNN-----SALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFL 60
           MGACLS+  N     S  PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SS SDSFL
Sbjct: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60

Query: 61  CNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNAST 120
           CNSDRLYYDDFIPPLP D+ LLP+ IYFLLPSSNLHHRL+AS MAALAVKA+LALQNAS 
Sbjct: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120

Query: 121 NNNHNHRRKKGRISPLLLPNPSDSDHIVSKD--QHHPDTDTSAS-SVKKLHRLTSRTAKM 180
           N+    RRKKGR+SPLL  N SDSDHI+SK+  + +   DTSAS SV+KL RLTSR AKM
Sbjct: 121 ND----RRKKGRVSPLL--NLSDSDHIISKEPSKKNAAADTSASPSVRKLQRLTSRRAKM 180

Query: 181 AVRSFKLKLSTIYEGTVL 191
           AVRSFKLKLSTIYEG VL
Sbjct: 181 AVRSFKLKLSTIYEGAVL 192

BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1FIQ7 (uncharacterized protein LOC111446101 OS=Cucurbita moschata OX=3662 GN=LOC111446101 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 151/198 (76.26%), Postives = 165/198 (83.33%), Query Frame = 0

Query: 1   MGACLSNNNN-----SALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFL 60
           MGACLS+  N     S  PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SS SDSFL
Sbjct: 1   MGACLSDCLNHPKPSSVSPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSLSDSFL 60

Query: 61  CNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNAST 120
           CNSDRLYYDDFIPPLP D+ LLP+ IYFLLPSSNLHHRL+AS MAALAVKA+LALQNAS 
Sbjct: 61  CNSDRLYYDDFIPPLPLDEQLLPNQIYFLLPSSNLHHRLSASQMAALAVKASLALQNASP 120

Query: 121 NNNHNHRRKKGRISPLLLPNPSDSDHIVSKD--QHHPDTDTSAS-SVKKLHRLTSRTAKM 180
           N+    RRKKGR+SPLL  N SDSDHI+SK+  + +   DTSAS SV+KL RLTS+ AKM
Sbjct: 121 ND----RRKKGRVSPLL--NLSDSDHIISKEPSKKNAAADTSASPSVRKLQRLTSKRAKM 180

Query: 181 AVRSFKLKLSTIYEGTVL 191
           AVRSFKLKLSTIYEG VL
Sbjct: 181 AVRSFKLKLSTIYEGAVL 192

BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A0A0L5Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665120 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.2e-59
Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0

Query: 1   MGACLSN-------NNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDS 60
           MG C SN       +++   PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SSTSDS
Sbjct: 1   MGGCFSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNA 120
           FLCNSDRL+YDDFIP LP D  L P+ IYF+LPSSNLHHRL A DMAALAVKATLALQNA
Sbjct: 61  FLCNSDRLFYDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 STNNNH--NHRRKKGRISPLL-LPNPSDS------DHIVSKDQHHPDTDTSASSVKKLHR 180
           STNN H  +++ ++ RISPL  L +P+D       +H +S + +  + +T++SSVKKL R
Sbjct: 121 STNNLHLPHNKGRRRRISPLFDLDSPNDQQNEHEHEHALSTNSNSKN-NTTSSSVKKLQR 180

Query: 181 LTSRTAKMAVRSFKLKLSTIYEGTVL 191
           LTSR AKMAVRSFKL+LSTIYEGTVL
Sbjct: 181 LTSRRAKMAVRSFKLRLSTIYEGTVL 205

BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A1S3BUP5 (uncharacterized protein LOC103493864 OS=Cucumis melo OX=3656 GN=LOC103493864 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 139/209 (66.51%), Postives = 159/209 (76.08%), Query Frame = 0

Query: 1   MGACLSN-------NNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDS 60
           MG CLSN       +++   PPPPTAKVISLQGHLREYP+PISVSRVLQTENS SSTSDS
Sbjct: 1   MGGCLSNCLIIPKVSSSVPPPPPPTAKVISLQGHLREYPVPISVSRVLQTENSSSSTSDS 60

Query: 61  FLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNA 120
           FLCNSDRLY+DDFIP LP D  L P+ IYF+LPSSNLHHRL A DMAALAVKATLALQNA
Sbjct: 61  FLCNSDRLYFDDFIPSLPLDHQLHPNQIYFILPSSNLHHRLTAPDMAALAVKATLALQNA 120

Query: 121 STNNNH-----NHRRKKGRISPLL-LPNPSDS------DHIVSKDQHHPDTDTSASSVKK 180
           STNN H      ++ ++ RISPL  L +P+D       +H +S + +  +   S+SSVKK
Sbjct: 121 STNNLHLSHLPRNKGRRHRISPLFDLDSPNDQQHEHEHEHALSINSNSKNNTASSSSVKK 180

Query: 181 LHRLTSRTAKMAVRSFKLKLSTIYEGTVL 191
           L RLTSR AKMAVRSFKL+LSTIYEGT L
Sbjct: 181 LQRLTSRRAKMAVRSFKLRLSTIYEGTDL 209

BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1DM27 (uncharacterized protein LOC111021675 OS=Momordica charantia OX=3673 GN=LOC111021675 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 9.5e-56
Identity = 135/206 (65.53%), Postives = 150/206 (72.82%), Query Frame = 0

Query: 1   MGACLSNNNNSALPPP--PTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNS 60
           MGACLS +  S  PPP  PTAKVISL+G+LREYP PISVSRVLQTEN  SSTSDSFLCNS
Sbjct: 1   MGACLSCSPASVPPPPATPTAKVISLEGNLREYPAPISVSRVLQTENPSSSTSDSFLCNS 60

Query: 61  DRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNASTNNN 120
           D LYYDDFIPP+P DD LL   IYFLLPSS L  RL+ASDMAA+A+KA+LALQNAS+ + 
Sbjct: 61  DSLYYDDFIPPMPLDDQLLASQIYFLLPSSKLRQRLSASDMAAMALKASLALQNASSKD- 120

Query: 121 HNHRRKKGRISPLLLPNPSDSDHIVSKDQHHPDTD--------------TSASSVKKLHR 180
               RKKGRISPLL+PNP+   H  S     P                   +SSV+KL +
Sbjct: 121 -PLLRKKGRISPLLIPNPTSDSHSDSDSNLAPSDSKKNNGVPVPIPIPIPESSSVRKLQK 180

Query: 181 LTSRTAKMAVRSFKLKLSTIYEGTVL 191
           LTSR AKMAVRSFKLKLSTIYEGTVL
Sbjct: 181 LTSRRAKMAVRSFKLKLSTIYEGTVL 204

BLAST of Tan0005555 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 95/215 (44.19%), Postives = 136/215 (63.26%), Query Frame = 0

Query: 1   MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDS----FLC 60
           MG C+S N N  +    TAK++++ G LREY +P+  S+VL++E++ SS+S S    FLC
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNASTN 120
           NSD LYYDDFIP +  D+ L  + IYF+LP S   +RL+ASDMAALAVKA++A++ A+  
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAA-- 120

Query: 121 NNHNHRRKKGRISPLLLPNPSDSDHIVS-------------------KDQHHPDTDTS-- 180
              N RR+ GRISP++  N ++ + I +                    ++  P  DT+  
Sbjct: 121 GKKNRRRRSGRISPVVTLNQANDNRIAAVNNRIGGEATNMMMQKGKLPNRTTPFKDTNGY 180

Query: 181 --ASSVKKLHRLTSRTAKMAVRSFKLKLSTIYEGT 189
             + SV+KL R TS  AK+AVRSF+L+LSTIYEG+
Sbjct: 181 SRSGSVRKLKRYTSGRAKLAVRSFRLRLSTIYEGS 213

BLAST of Tan0005555 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 95/216 (43.98%), Postives = 134/216 (62.04%), Query Frame = 0

Query: 1   MGACLS---NNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTEN--SYSSTSDS-- 60
           MG C+S    ++NS+    PT K++++ G LREY +P+  S+VL+ E+  +YSS+S S  
Sbjct: 1   MGICVSFRREDSNSS----PTVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRP 60

Query: 61  ---FLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLAL 120
              F+C+SD LYYDDFIP +  ++ L  D IYF+LP S    RL ASDMAALAVKA++A+
Sbjct: 61  SSYFICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAI 120

Query: 121 QNASTNNNHNHRRKKGRISPLLL-------PNPSDSDHIVSKDQHHPDTD---------T 180
           QN+      + RRKK RISP+++        N + S+  V K +                
Sbjct: 121 QNSV--KKESRRRKKVRISPVMMLTGSNDSVNGNGSETTVKKGRPFVSKTAPVKASSGIN 180

Query: 181 SASSVKKLHRLTSRTAKMAVRSFKLKLSTIYEGTVL 191
            + SV+ L R TS+ AK+AVRSF+LKLSTIYEG+V+
Sbjct: 181 RSGSVRNLRRYTSKRAKLAVRSFRLKLSTIYEGSVV 210

BLAST of Tan0005555 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0

Query: 1   MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNSDR 60
           MGAC S  +        TAK+I   G L+E+  P+ V ++LQ          SF+CNSD 
Sbjct: 1   MGACASRESRRT----ETAKLILPDGTLQEFSTPVKVWQILQ------KNPTSFVCNSDD 60

Query: 61  LYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLAL 111
           + +DD +  +P  + L P  +YF+LP + L+H L A +MAALAVKA+ AL
Sbjct: 61  MDFDDAVLAVPGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSAL 100

BLAST of Tan0005555 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-12
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0

Query: 1   MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNSDR 60
           MGAC S  +  +     +AK+I L G L+E+  P+ V ++LQ          SF+CNSD 
Sbjct: 1   MGACASRESLRS----DSAKLILLDGTLQEFSSPVKVWQILQ------KNPTSFVCNSDE 60

Query: 61  LYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLAL 111
           + +DD +  +  ++ L    +YF+LP + L+H L A +MAALAVKA+ AL
Sbjct: 61  MDFDDAVSAVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSAL 100

BLAST of Tan0005555 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-11
Identity = 45/133 (33.83%), Postives = 69/133 (51.88%), Query Frame = 0

Query: 1   MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNSDR 60
           MG C S  +        TAK+I   G + E+  P+ V  VLQ           F+CNSD 
Sbjct: 1   MGICSSYESTQV----ATAKLILHDGRMMEFTSPVKVGYVLQ------KNPMCFICNSDD 60

Query: 61  LYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNASTNNNHN 120
           + +D+ +  +  D+      +YF LP S+LHH L A +MAALAVKA+ AL  +  +   +
Sbjct: 61  MDFDNVVSAISADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRD 120

Query: 121 H-RRKKGRISPLL 133
             R ++  +SP++
Sbjct: 121 KCRCRRKCVSPVI 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022981858.12.1e-6576.77uncharacterized protein LOC111480876 [Cucurbita maxima] >XP_023525127.1 uncharac... [more]
XP_022940531.14.7e-6576.26uncharacterized protein LOC111446101 [Cucurbita moschata][more]
XP_011654294.16.5e-5967.48uncharacterized protein LOC101220453 [Cucumis sativus] >KGN55556.1 hypothetical ... [more]
XP_038896630.16.5e-5968.63uncharacterized protein LOC120084892 [Benincasa hispida][more]
XP_008453039.18.5e-5966.51PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1J3811.0e-6576.77uncharacterized protein LOC111480876 OS=Cucurbita maxima OX=3661 GN=LOC111480876... [more]
A0A6J1FIQ72.3e-6576.26uncharacterized protein LOC111446101 OS=Cucurbita moschata OX=3662 GN=LOC1114461... [more]
A0A0A0L5Z93.2e-5967.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665120 PE=4 SV=1[more]
A0A1S3BUP54.1e-5966.51uncharacterized protein LOC103493864 OS=Cucumis melo OX=3656 GN=LOC103493864 PE=... [more]
A0A6J1DM279.5e-5665.53uncharacterized protein LOC111021675 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
Match NameE-valueIdentityDescription
AT1G76600.13.4e-3744.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT1G21010.11.3e-3343.98unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT3G50800.13.4e-1340.91unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G66580.14.9e-1239.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT2G23690.14.1e-1133.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..186
e-value: 6.8E-28
score: 98.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..163
NoneNo IPR availablePANTHERPTHR33052DUF4228 DOMAIN PROTEIN-RELATEDcoord: 1..190
NoneNo IPR availablePANTHERPTHR33052:SF87POLY POLYMERASEcoord: 1..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0005555.1Tan0005555.1mRNA