Tan0005555 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATATTGACGCAACTCTCATTCTCTTTCCTCCTCATCACTTACCTCACAAGATGATGATCAGATTTCAATGGCAAGTAATCAATATATATATATATATATGTATATGGCTATGAACCCCCTTCATAGCTATAGTTGAATAGATCTAATTGATATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAGGGAGAGTAATTACAAGGGATTTCAGCCCCCGATTTTTGTGTGGATACGTCCCGCCTCTGGTACATATATATCCATATATATATATTTGTTCATTTTCATTTCTCCTCTCTGTAAAGCAACATAATTTGAAAGAAAAAACAAATATAATCTGAGATTCATTTTTCCAACGTTCAGGTATATATAGAGGGAATTGTCCTCTTCCGAATTAAATCGTGATCTGATTCCAACTAATTGCAATTAAATTAATATTGTGTACGTTGAGACGACTGGGGTGTAATTGGATTAATGGGAAGGCGATCAAGATGAAGAAAATTAAAAACGGTGGACCGACGGAGGCGGCAACGGGCAATGGGCAATCTAAGTCAAGAGTCAAATGGGACTCGGAGGGCATTTAATTGAAATACAATGTGAAGACGGAAGAATTGAGAATTTGAAGCCGCGCACCCAAATTTGATGCCATCCACGACTCTGTTGTGTTTACCAACGCACTAATACAATTCCTCTTTTTCTCCTTTCTTTTCTATTAATTCGACGTTCTTTGATCTCTCTACCATATTGTCGATGCCTATATCTATTTCCCTTCTTCTTCTTCTTTTTTTCCCCTATTCTATTTATAATTTATTAATAATAGTCTTTTTTTTTTCTTTTTTTTTAATGTTAAACCAACGCTACGCTACCTAACCCATGCTTAAGTTAATAACTAAGGACTATAGTTTAATTAATTTATCAGATATTTGATTAGGAAATACTTTGTAAAGTCAA CAATATTGACGCAACTCTCATTCTCTTTCCTCCTCATCACTTACCTCACAAGATGATGATCAGATTTCAATGGCAAGTAATCAATATATATATATATATATGTATATGGCTATGAACCCCCTTCATAGCTATAGTTGAATAGATCTAATTGATATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAGGGAGAGTAATTACAAGGGATTTCAGCCCCCGATTTTTGTGTGGATACGTCCCGCCTCTGGTATATATAGAGGGAATTGTCCTCTTCCGAATTAAATCGTGATCTGATTCCAACTAATTGCAATTAAATTAATATTGTGTACGTTGAGACGACTGGGGTGTAATTGGATTAATGGGAAGGCGATCAAGATGAAGAAAATTAAAAACGGTGGACCGACGGAGGCGGCAACGGGCAATGGGCAATCTAAGTCAAGAGTCAAATGGGACTCGGAGGGCATTTAATTGAAATACAATGTGAAGACGGAAGAATTGAGAATTTGAAGCCGCGCACCCAAATTTGATGCCATCCACGACTCTGTTGTGTTTACCAACGCACTAATACAATTCCTCTTTTTCTCCTTTCTTTTCTATTAATTCGACGTTCTTTGATCTCTCTACCATATTGTCGATGCCTATATCTATTTCCCTTCTTCTTCTTCTTTTTTTCCCCTATTCTATTTATAATTTATTAATAATAGTCTTTTTTTTTTCTTTTTTTTTAATGTTAAACCAACGCTACGCTACCTAACCCATGCTTAAGTTAATAACTAAGGACTATAGTTTAATTAATTTATCAGATATTTGATTAGGAAATACTTTGTAAAGTCAA ATGGGCGCCTGTTTGTCTAACAACAATAATTCTGCCCTTCCACCTCCTCCCACCGCGAAAGTGATATCTTTACAAGGCCATCTTCGCGAATACCCCATTCCTATCTCCGTCTCCCGCGTTCTCCAAACCGAAAATTCATATTCTTCCACTTCCGACTCCTTTCTATGCAACTCCGATCGCTTATACTACGATGACTTCATTCCGCCTTTGCCTCACGACGATCACCTTCTCCCCGATCACATCTATTTCCTCCTTCCTTCCTCCAACCTCCACCACCGGTTAGCTGCCTCCGATATGGCCGCCTTGGCCGTCAAAGCCACCCTCGCACTCCAAAATGCCTCCACCAACAATAATCATAATCATCGCCGTAAAAAGGGTCGTATCTCTCCTCTCCTCCTCCCCAACCCCTCGGATTCCGACCACATCGTCTCCAAGGATCAACACCACCCCGACACCGACACGTCTGCTTCCTCCGTTAAAAAATTGCACAGATTGACATCCAGAACAGCAAAAATGGCCGTTCGTTCTTTTAAACTCAAATTGAGCACCATCTATGAAGGCACCGTTCTGTAG MGACLSNNNNSALPPPPTAKVISLQGHLREYPIPISVSRVLQTENSYSSTSDSFLCNSDRLYYDDFIPPLPHDDHLLPDHIYFLLPSSNLHHRLAASDMAALAVKATLALQNASTNNNHNHRRKKGRISPLLLPNPSDSDHIVSKDQHHPDTDTSASSVKKLHRLTSRTAKMAVRSFKLKLSTIYEGTVL Homology
BLAST of Tan0005555 vs. NCBI nr
Match: XP_022981858.1 (uncharacterized protein LOC111480876 [Cucurbita maxima] >XP_023525127.1 uncharacterized protein LOC111788827 [Cucurbita pepo subsp. pepo] >KAG6608670.1 hypothetical protein SDJN03_02012, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037985.1 hypothetical protein SDJN02_01618, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 259.6 bits (662), Expect = 2.1e-65 Identity = 152/198 (76.77%), Postives = 165/198 (83.33%), Query Frame = 0
BLAST of Tan0005555 vs. NCBI nr
Match: XP_022940531.1 (uncharacterized protein LOC111446101 [Cucurbita moschata]) HSP 1 Score: 258.5 bits (659), Expect = 4.7e-65 Identity = 151/198 (76.26%), Postives = 165/198 (83.33%), Query Frame = 0
BLAST of Tan0005555 vs. NCBI nr
Match: XP_011654294.1 (uncharacterized protein LOC101220453 [Cucumis sativus] >KGN55556.1 hypothetical protein Csa_012182 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 6.5e-59 Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0
BLAST of Tan0005555 vs. NCBI nr
Match: XP_038896630.1 (uncharacterized protein LOC120084892 [Benincasa hispida]) HSP 1 Score: 238.0 bits (606), Expect = 6.5e-59 Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 0
BLAST of Tan0005555 vs. NCBI nr
Match: XP_008453039.1 (PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo]) HSP 1 Score: 237.7 bits (605), Expect = 8.5e-59 Identity = 139/209 (66.51%), Postives = 159/209 (76.08%), Query Frame = 0
BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1J381 (uncharacterized protein LOC111480876 OS=Cucurbita maxima OX=3661 GN=LOC111480876 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65 Identity = 152/198 (76.77%), Postives = 165/198 (83.33%), Query Frame = 0
BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1FIQ7 (uncharacterized protein LOC111446101 OS=Cucurbita moschata OX=3662 GN=LOC111446101 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65 Identity = 151/198 (76.26%), Postives = 165/198 (83.33%), Query Frame = 0
BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A0A0L5Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665120 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 3.2e-59 Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0
BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A1S3BUP5 (uncharacterized protein LOC103493864 OS=Cucumis melo OX=3656 GN=LOC103493864 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59 Identity = 139/209 (66.51%), Postives = 159/209 (76.08%), Query Frame = 0
BLAST of Tan0005555 vs. ExPASy TrEMBL
Match: A0A6J1DM27 (uncharacterized protein LOC111021675 OS=Momordica charantia OX=3673 GN=LOC111021675 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 9.5e-56 Identity = 135/206 (65.53%), Postives = 150/206 (72.82%), Query Frame = 0
BLAST of Tan0005555 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37 Identity = 95/215 (44.19%), Postives = 136/215 (63.26%), Query Frame = 0
BLAST of Tan0005555 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33 Identity = 95/216 (43.98%), Postives = 134/216 (62.04%), Query Frame = 0
BLAST of Tan0005555 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Tan0005555 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 4.9e-12 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Tan0005555 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 4.1e-11 Identity = 45/133 (33.83%), Postives = 69/133 (51.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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