Tan0005436 (gene) Snake gourd v1

Overview


Name	Tan0005436
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	serine/arginine-rich-splicing factor SR34-like
Location	LG06: 6697906 .. 6702418 (+)
RNA-Seq Expression	Tan0005436
Synteny	Tan0005436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCACATTACTGTGCAACGCGATACAGATTATCATAACCGTACCATATATTTACTCGCGCTACCAAACTTCGATTTTGAAACCCTAACATTCACAGTCCTCTCGCCTCTGCGCTTCGTCATCAACAGATCGAAATCGAGGTAACCTTCAATCAAACGCTGAATCCTAATTAATTAATTCGAATACAGAATTCTCTTCGAGTTTAATCTTATTCGAGGTTTAGATTTTGTAGCTTCTGATTTCCTTTTCTCCGTTTCTTGTAAGATATAATCGGTAATGTTATTCGTTTTTACGTTTCATCTCTTTAGGGAAAATGAGTAGCCGTGCCAGCAGAACAGTCTATGTCGGAAATCTCCCAGGTGATATTCGCGAAAAGGAAGTTGAAGATTTATTTTACAAGGTAATTCTTCGTAATTTTGTATGCCCGTGGTCTTTTGGCGTCTAGATGGATAATCGATATTGTTGTCTTCTTGGCTGGAGTTTTTTGGGCGACAAAAATCTTTTTAGTGTATTTTGCTACCCGTTTATTATGGAGAGCGCGTTAACCATGTAATGATTTTCCATTTTGGTGCTGCACGGTATGTTTGTTGGCTTCTCTTTCTTCAGTTGACTGGATATTATAACGTGGTATGGTAAGGCGTGCAAGCGTAGAATGCTAAATGTTTTGCTTTCGGTAATTGTGAGGAAGGGTGTGTGATGAGCCTATAAATGTAGGAGTAATACATACCCACTTTTAAATTATTGACGCAACATTATGTGGTTTTTCTTTCTTAAATGGTTCAAGATGATCCGGGACTACATTAAAATAAGTCTGTAGTCTTATTTTCTCGAAATATTTAATTTATGTCTATTCCCATTTGGCATTTTTATTGTAGTATGGTCGCATAGCCCATATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTCGTTGAGGTGAGCTTTTTGCACATGATAGGATATATTCTCCTCCTTTTAAATAATCATTACTTATCTTCTCATATATGGATTTAATAAATGTAGTTTGAAGATGCGGAAGATGCTCAAGATGCCATTCGTGGTCGTGATGGCTATGATTTTGATGGCCATAGGCTGCGCGTGAGACACTAACTAAGCCTATTTCAATTGTTACAAGAGTTGGTCATTTTTGCACTTTTTTACTGATCAGTTGTAATTATGTTTGTTTCTCTATGTTTCTAGGTGGAACTTGCTCATGGTGGTCGTGGTCATTCGTCATCTAGTGATCGTTATAACAGTTATGGAGGCAGTCGAGGTGGGCGTGGTGTATCTCGACGCTCTGATTTTCGTGGTATATACCCTTTTCTTAGGTACCATATGATATTTTGACATTGTAAACATTGGTGGATATTATAATATATGTTTTTTCTCATGCAGTATTAGTCACAGGATTACCTTCTTCTGCCTCATGGCAAGACTTAAAGGTAAGCATCATTCCATTTGACATGAATTTTATGTGCAGAGGCAGTCTATTTTTCTTGATCGGCACTGAACATATTATTTAATGGTTAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGCAGTGGTGAGATACCTTCTGATGAAGTGGCTTCAAATTCAGTATAATATGATTTAGAGAACTAAATAACTACTGTGTTGTAGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAGTAAGTAGCTTTTTTCTTTGTTCTAAGATGTTTGAAATGTTGAGCCTCAATGATCACCTAGCATGTTGGATTGCCACTATGATTTTAAGAGCTTAAGCTTTGATTTGGTGATATGCGATGGCATTTGTGTCCTTGTCACTGCAGATTAAAAAACTTGACGACTCTGAGTTCCGCAATGCGTTTTCACGGGCATATGTTCGAGTATGAACTATACCTTCTTGATCTATTAACTTTTTTTTTTAATTTAATTTTTATAATTGTCTTCTTGTTTCTCAACTGTTTTAATTTTGGTTTTGACAGGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGTCGAAGTAGGAGCAAGAGCCGCAGTAGGAGGTTGGCTAGTTAGCATTAAAATAGTTTTAGCTCATTTGTCTTGTATTTAATATTTTTTTTAACTTTTGAACAGCAAATCTCCAAAAGCTAAATCTTCCCAGCGGTCACCTGTTAAATCTCGATCAAGGTCTGCTTCCCCTGCTCGCTCTCGGTCAAAGTCATCATCTCTTTCAGGGTATGTATTGTTATTTCGTAAACTATTATCATTCTTGTGATCCTTAATTTTATTTTATTCGATTCTATTGTATTTTTTAAAATAAGATCTAACTGCAGTCTGCTCATTGTTTATCTATATTTATATGATTTAAGTTTGCTGTCACTCAAGCAGGGTCTGTTTGTTGCACCCCCTTCTTTCATTGGGCAGAATGTTAGACTGGGTGAAATAAACAACATAAAAGTACTGAAAGTGAACTAATTCTTTTGTATTGCTCAAGCACGGGTCAGCAAGTGGTTTAAAATTTAGCAACGGAATTGAAATTACCTTACTGGATGCTATGTGTTTGCATGCGGTATTGTGGCTCTTACAATTCTCTTGAATGTGAAATCCACCCTTTTCTTCCAAAGTCTTGGATGCATTCTGAGAGTGGTGGAGATGAATACTGGACGTACTTCAAATTAGTCTGGGCAATGTGTGGGACCCTCTATTGGAATGTTGGGTAAACTTTATCCTAATTGACTCAATTAAGTTATTAATATTTTACATCTGATTCTGCTTTCTTTTTAATTACTCATCGTCAAGGGCTTCCCCTTTATCAATTATGAATGATTTTGTTCAACAACTGGGATAGCTAAGAAATGAATAGATTTCTTTCATTCATTGTCCTTTTTGTGTGTGAAAATTACTCGTTTGTTTTTTAGATATGGAAATATGCGGCATACTGGGGATTGGATATTAGGATCTTGATGGGATTTGATTCAATTGCCTTCAATGCTTTTGGTTGAGAAGGTATGCTGTTTTTTAGATGGACAGCTTTGAAAACCTTCTGGTACCTCTGTTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTGGGATCAAAGGAGATCATGGATTGCAATAATAGAGCTGGATATCTTTGAACTAATTGCTATTTGGACTTGGAAGTCATCATCACTTTCATTTACATTTTCTGCCGCAAGATTTGCCAAGCTATAGGACGGACTATCTGGATTCATTGTGGACATTTTGAGGCACAGTAGGGAAGAATGCTCCTCTCCCGTCCACTGGTGTCTATAATATATAGGTTCCTGTAGATTAAAGTTTTCTAATTTTAGGTCTTCACTTTGGAGTCTTAAGTTTTTGAATTAGCATATGACCTTCATAGTTGAACTGCTAAAATACTATTTTCCTTTCTCTACTTATACAATGTGGATGAGGCGTCAGGCTCATGGATCAAATTTGGTAAAAGAGGCGTGGATTTTAAATTTGAGTTGTTTCTGGACATTTTGCAGATCGCGATCAAGGTCCAGGTCTCCAGTGCCCAATGTAAGTGATCCCTGTTATGAACTAGTCATTCCTGCAGGTGGTATTAGAATTTATCCCTGTCAATCCCTTTGATTTTAATTGATATATTTTGTGTTGCATTCTGCATATGGTCATGGTTTAAATGGCAGCATGAGAAACGTAGTAGTAAAAGTCCCAAAAGGCGTGATGCTAGCAAAAGCCCTAGCAGAAGTAGGAGCCGAAGCCGAAGCAGGAGCAAGAGCAAGAGTCCTTCCCGGTAAAAGCTTTTGCTTATTTTGTTTTTGATTTCTGCTGTCAAGAATAGTCTTTACTGGGACACACTGTAAATGCCATTGATTGTGCATATGCCTTATTAACAATGATACTTTCCTTGAAACATTAATGGATACGATTCCTTATTTTGACGTTGAGTCTGTTTGAACTGGTGAACAGATGAAGATGGAGGCAGTTCTGTTGATTTCCATATGCCTGGAGTGGAGTGGAGTGGAGTGGAGTTGGAATCAGAGCATTAATCTGTGAACCTATCGGGAATAGACTTCATTAGACTTGATAGTAACTATGTTTTGTTTGGTCCCCCCTTCATGTGTGTTCTATTCGTATAGGATGATGTCGTCAGTTGAGAAATGCTTAAAATATTCCCAAAATTCACATTCTTAGTTTCAGGATGCTACCTAAAAATTTCACTGTTCAGAAAGAAAAAGCTTCTGAAACTCAGCACCAAACATTATAATGCTTTATGTAGTTTAGGAAAAACTAAAAATGTTTCCTAATCTCTGACTTATCTTTTTTCTCATTCTCCATTAGTATATTTTACATGTTTGTTTTTTTTAATTGTCTTACATTGTCTTCAGTCTTACGTTAGTAACTTTCGTACGGTGTATGTAAATTCGTC

mRNA sequence

CCAGCACATTACTGTGCAACGCGATACAGATTATCATAACCGTACCATATATTTACTCGCGCTACCAAACTTCGATTTTGAAACCCTAACATTCACAGTCCTCTCGCCTCTGCGCTTCGTCATCAACAGATCGAAATCGAGGGAAAATGAGTAGCCGTGCCAGCAGAACAGTCTATGTCGGAAATCTCCCAGGTGATATTCGCGAAAAGGAAGTTGAAGATTTATTTTACAAGTATGGTCGCATAGCCCATATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTCGTTGAGTTTGAAGATGCGGAAGATGCTCAAGATGCCATTCGTGGTCGTGATGGCTATGATTTTGATGGCCATAGGCTGCGCGTGGAACTTGCTCATGGTGGTCGTGGTCATTCGTCATCTAGTGATCGTTATAACAGTTATGGAGGCAGTCGAGGTGGGCGTGGTGTATCTCGACGCTCTGATTTTCGTGTATTAGTCACAGGATTACCTTCTTCTGCCTCATGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGCAGTGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAATTAAAAAACTTGACGACTCTGAGTTCCGCAATGCGTTTTCACGGGCATATGTTCGAGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGTCGAAGTAGGAGCAAGAGCCGCAGTAGGAGCAAATCTCCAAAAGCTAAATCTTCCCAGCGGTCACCTGTTAAATCTCGATCAAGGTCTGCTTCCCCTGCTCGCTCTCGGTCAAAGTCATCATCTCTTTCAGGATCGCGATCAAGGTCCAGGTCTCCAGTGCCCAATCATGAGAAACGTAGTAGTAAAAGTCCCAAAAGGCGTGATGCTAGCAAAAGCCCTAGCAGAAGTAGGAGCCGAAGCCGAAGCAGGAGCAAGAGCAAGAGTCCTTCCCGATGAAGATGGAGGCAGTTCTGTTGATTTCCATATGCCTGGAGTGGAGTGGAGTGGAGTGGAGTTGGAATCAGAGCATTAATCTGTGAACCTATCGGGAATAGACTTCATTAGACTTGATAGTAACTATGTTTTGTTTGGTCCCCCCTTCATGTGTGTTCTATTCGTATAGGATGATGTCGTCAGTTGAGAAATGCTTAAAATATTCCCAAAATTCACATTCTTAGTTTCAGGATGCTACCTAAAAATTTCACTGTTCAGAAAGAAAAAGCTTCTGAAACTCAGCACCAAACATTATAATGCTTTATGTAGTTTAGGAAAAACTAAAAATGTTTCCTAATCTCTGACTTATCTTTTTTCTCATTCTCCATTAGTATATTTTACATGTTTGTTTTTTTTAATTGTCTTACATTGTCTTCAGTCTTACGTTAGTAACTTTCGTACGGTGTATGTAAATTCGTC

Coding sequence (CDS)

ATGAGTAGCCGTGCCAGCAGAACAGTCTATGTCGGAAATCTCCCAGGTGATATTCGCGAAAAGGAAGTTGAAGATTTATTTTACAAGTATGGTCGCATAGCCCATATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTCGTTGAGTTTGAAGATGCGGAAGATGCTCAAGATGCCATTCGTGGTCGTGATGGCTATGATTTTGATGGCCATAGGCTGCGCGTGGAACTTGCTCATGGTGGTCGTGGTCATTCGTCATCTAGTGATCGTTATAACAGTTATGGAGGCAGTCGAGGTGGGCGTGGTGTATCTCGACGCTCTGATTTTCGTGTATTAGTCACAGGATTACCTTCTTCTGCCTCATGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGCAGTGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAATTAAAAAACTTGACGACTCTGAGTTCCGCAATGCGTTTTCACGGGCATATGTTCGAGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGTCGAAGTAGGAGCAAGAGCCGCAGTAGGAGCAAATCTCCAAAAGCTAAATCTTCCCAGCGGTCACCTGTTAAATCTCGATCAAGGTCTGCTTCCCCTGCTCGCTCTCGGTCAAAGTCATCATCTCTTTCAGGATCGCGATCAAGGTCCAGGTCTCCAGTGCCCAATCATGAGAAACGTAGTAGTAAAAGTCCCAAAAGGCGTGATGCTAGCAAAAGCCCTAGCAGAAGTAGGAGCCGAAGCCGAAGCAGGAGCAAGAGCAAGAGTCCTTCCCGATGA

Protein sequence

MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRSKSKSPSR

Homology

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BLAST of Tan0005436 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-104
Identity = 223/306 (72.88%), Postives = 250/306 (81.70%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGG---------RGVSRRSDF 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R +  GG RGG         RG SRRS+F
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSR 298
           KSS+RSP KS SRS  P RS+S+S S   SRSRSRSP+P+ +K  SKSP +   +KSP  
Sbjct: 241 KSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 300

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BLAST of Tan0005436 vs. ExPASy Swiss-Prot
Match: F4JHI7 (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-93
Identity = 200/270 (74.07%), Postives = 221/270 (81.85%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYG----GSRGG-------RGVSRRS 120
           AI GRDGYDFDGH LRVELAHGGR   SS D   SY     G RGG       RG SRRS
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR--RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRS 120

Query: 121 DFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           ++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LD
Sbjct: 121 EYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LD 180

Query: 181 DSEFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRNAFS  YVRVREYDS+RD SRSPSRGRSYS+ RS  RS SR RSRS+SRS+S+SP
Sbjct: 181 DTEFRNAFSHEYVRVREYDSRRD-SRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSP 240

Query: 241 KAKSSQRSPVKSRSRSASPARSRSKSSSLS 260
           KAKS +RSP KS SRS   +RSRSKS SLS
Sbjct: 241 KAKSLRRSPAKSTSRSPR-SRSRSKSRSLS 263

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BLAST of Tan0005436 vs. ExPASy Swiss-Prot
Match: A2RVS6 (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.9e-85
Identity = 197/318 (61.95%), Postives = 230/318 (72.33%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+D
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR------YNSYGGSRGGR-----GVSRRS 120
           AI+GRDGY+ DG RLRVELAHGGRG SSS  R       + YGG  GG      GVSR S
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 121 DFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           +FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRN ++R ++RV++Y+S R  SRSPSR RS SR RS SR R R  SRS+S SRSKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240

Query: 241 KAKSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSP 300
           +           +  S SP R      SLS S S+SRSP P+      KSP R   + S 
Sbjct: 241 R-----------KDLSKSPRR------SLSRSISKSRSPSPD----KKKSPPR---AMSR 294

Query: 301 SRSRSRSRSRSKSKSPSR 308
           S+SRSRSRSRS SKSP +
Sbjct: 301 SKSRSRSRSRSPSKSPPK 294

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BLAST of Tan0005436 vs. ExPASy Swiss-Prot
Match: Q9XFR5 (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.5e-84
Identity = 189/271 (69.74%), Postives = 210/271 (77.49%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR +RT+YVGNLPGDIR+ EVEDLFYKYG I  IDLK+PPRPPGYAFVEFED  DA D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY-NSYGGSRGGRGVSRRSDFRVLVTGLP 120
           AI GRDGYDFDG RLRVE+AHGGR  S S DRY +SY  S   R  SRRSD+RVLVTGLP
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSAS---RAPSRRSDYRVLVTGLP 120

Query: 121 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR 180
            SASWQDLKDHMR+AGDVCFS+VF D  G +G+VDY+NYDDMKYAI+KLD +EFRNAFS 
Sbjct: 121 PSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS 180

Query: 181 AYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRS-KSRSRSKSPKAKSSQRSP 240
           AY+RVREY+S R +SRSP   +SY      SRSRSRG S S  S+SRS SP    S RS 
Sbjct: 181 AYIRVREYES-RSVSRSPDDSKSYR-----SRSRSRGPSCSYSSKSRSVSPARSISPRSR 240

Query: 241 VKSRSRSASPARSRSKSSSLSGSRSRSRSPV 270
             SRSRS   + SRS+S S S SRSRS SPV
Sbjct: 241 PLSRSRSLYSSVSRSQSRSKSRSRSRSNSPV 262

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BLAST of Tan0005436 vs. ExPASy Swiss-Prot
Match: Q6NYA0 (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 9.6e-55
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0


Query: 9   VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGY 68
           +YVGNLP DIR K+VED+FYKYG I  IDLK     P +AFVEFED  DA+DA+ GRDGY
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76

Query: 69  DFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRG-VSRRSDFRVLVTGLPSSASWQDL 128
           D+DG+RLRVE    GRG           G  RG  G  SRRS++RV+V+GLP S SWQDL
Sbjct: 77  DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136

Query: 129 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRAYVRVRE 188
           KDHMR AGDVC++ VFRDG   TG+V++   +DM YA++KLD+++FR +    AY+RV  
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-- 196

Query: 189 YDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVKSRSRS 246
              K D  RSPS GRS SR RS SRSRS  RSRS S  RS+     S + SP  SRSRS
Sbjct: 197 ---KVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRG----SPRYSPRHSRSRS 243

[Close]

BLAST of Tan0005436 vs. NCBI nr
Match: XP_038898762.1 (serine/arginine-rich-splicing factor SR34-like isoform X1 [Benincasa hispida])

HSP 1 Score: 537.7 bits (1384), Expect = 6.4e-149
Identity = 299/306 (97.71%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSPVPN EKR+SKSPKRRDASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNREKRTSKSPKRRDASKSPSRSRSRSRSRS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 306

[Close]

BLAST of Tan0005436 vs. NCBI nr
Match: XP_008451568.1 (PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148
Identity = 298/307 (97.07%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSPVPN EKR+SKSPKRRDASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNREKRTSKSPKRRDASKSPSRSRSRSRSRS 300

Query: 301 KSKSPSR 308
           +SKS S+
Sbjct: 301 RSKSKSK 307

[Close]

BLAST of Tan0005436 vs. NCBI nr
Match: XP_022148198.1 (serine/arginine-rich-splicing factor SR34-like isoform X1 [Momordica charantia])

HSP 1 Score: 531.6 bits (1368), Expect = 4.6e-147
Identity = 295/306 (96.41%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSP+PN  KR+SKSPKRRDASKSPSRS+SRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPLPNRGKRTSKSPKRRDASKSPSRSKSRSRSRS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 306

[Close]

BLAST of Tan0005436 vs. NCBI nr
Match: XP_004136028.1 (serine/arginine-rich-splicing factor SR34 isoform X1 [Cucumis sativus] >KAE8646341.1 hypothetical protein Csa_015721 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 4.6e-147
Identity = 295/306 (96.41%), Postives = 301/306 (98.37%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSS+DRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKS SRSKSPKAK SQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKPSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASP RSRSKSSSLSGSRSRSRSPVPN EKR+SKSPKRRDASKSPSRSRSRSRS+S
Sbjct: 241 SRSRSASPPRSRSKSSSLSGSRSRSRSPVPNREKRTSKSPKRRDASKSPSRSRSRSRSKS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 306

[Close]

BLAST of Tan0005436 vs. NCBI nr
Match: XP_023547992.1 (serine/arginine-rich-splicing factor SR34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 5.1e-146
Identity = 293/307 (95.44%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+G SRGGRGVSRRSDFRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSDFRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRD S+SPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPK KSSQRSPVK
Sbjct: 181 YVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSS+LSGSRSRSRSP PN EKR+SKSPKRR+ASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSALSGSRSRSRSPAPNREKRTSKSPKRREASKSPSRSRSRSRSRS 300

Query: 301 KSKSPSR 308
           KSKS S+
Sbjct: 301 KSKSKSK 307

[Close]

BLAST of Tan0005436 vs. ExPASy TrEMBL
Match: A0A1S3BR66 (serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492811 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.9e-149
Identity = 298/307 (97.07%), Postives = 304/307 (99.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSPVPN EKR+SKSPKRRDASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNREKRTSKSPKRRDASKSPSRSRSRSRSRS 300

Query: 301 KSKSPSR 308
           +SKS S+
Sbjct: 301 RSKSKSK 307

[Close]

BLAST of Tan0005436 vs. ExPASy TrEMBL
Match: A0A6J1D3F5 (serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016926 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 295/306 (96.41%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSP+PN  KR+SKSPKRRDASKSPSRS+SRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPLPNRGKRTSKSPKRRDASKSPSRSKSRSRSRS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 306

[Close]

BLAST of Tan0005436 vs. ExPASy TrEMBL
Match: A0A6J1GP36 (serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456162 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.5e-146
Identity = 293/306 (95.75%), Postives = 299/306 (97.71%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AI GRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+G SRGGRGVSRRSDFRVLVTGLPS
Sbjct: 61  AISGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSDFRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRD S+SPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPK KSSQRSPVK
Sbjct: 181 YVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSP PN EKR+SKSPKRR+ASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPAPNREKRTSKSPKRREASKSPSRSRSRSRSRS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 306

[Close]

BLAST of Tan0005436 vs. ExPASy TrEMBL
Match: A0A1S3BRU3 (serine/arginine-rich-splicing factor SR34-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492811 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.1e-145
Identity = 295/307 (96.09%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGS   GIVDYTNYDDMKYAIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGS---GIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSPVPN EKR+SKSPKRRDASKSPSRSRSRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNREKRTSKSPKRRDASKSPSRSRSRSRSRS 300

Query: 301 KSKSPSR 308
           +SKS S+
Sbjct: 301 RSKSKSK 304

[Close]

BLAST of Tan0005436 vs. ExPASy TrEMBL
Match: A0A6J1D4F6 (serine/arginine-rich-splicing factor SR34-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016926 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.7e-144
Identity = 292/306 (95.42%), Postives = 300/306 (98.04%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGGRGVSRRSDFRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRY+S+GGSRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFSQVFRDGS   GIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGS---GIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSRSRSRSRSRS 300
           SRSRSASPARSRSKSSSLSGSRSRSRSP+PN  KR+SKSPKRRDASKSPSRS+SRSRSRS
Sbjct: 241 SRSRSASPARSRSKSSSLSGSRSRSRSPLPNRGKRTSKSPKRRDASKSPSRSKSRSRSRS 300

Query: 301 KSKSPS 307
           KSKS S
Sbjct: 301 KSKSKS 303

[Close]

BLAST of Tan0005436 vs. TAIR 10
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.1e-105
Identity = 223/306 (72.88%), Postives = 250/306 (81.70%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGG---------RGVSRRSDF 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R +  GG RGG         RG SRRS+F
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSR 298
           KSS+RSP KS SRS  P RS+S+S S   SRSRSRSP+P+ +K  SKSP +   +KSP  
Sbjct: 241 KSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 300

[Close]

BLAST of Tan0005436 vs. TAIR 10
Match: AT1G02840.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.1e-105
Identity = 223/306 (72.88%), Postives = 250/306 (81.70%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGG---------RGVSRRSDF 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R +  GG RGG         RG SRRS+F
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSPSR 298
           KSS+RSP KS SRS  P RS+S+S S   SRSRSRSP+P+ +K  SKSP +   +KSP  
Sbjct: 241 KSSRRSPAKSTSRSPGP-RSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 300

[Close]

BLAST of Tan0005436 vs. TAIR 10
Match: AT1G02840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-99
Identity = 202/266 (75.94%), Postives = 223/266 (83.83%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYGGSRGG---------RGVSRRSDF 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R +  GG RGG         RG SRRS+F
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRSYS+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSS 258
           KSS+RSP KS SRS  P RS+S+S S
Sbjct: 241 KSSRRSPAKSTSRSPGP-RSKSRSPS 263

[Close]

BLAST of Tan0005436 vs. TAIR 10
Match: AT4G02430.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 344.4 bits (882), Expect = 9.7e-95
Identity = 200/270 (74.07%), Postives = 221/270 (81.85%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYNSYG----GSRGG-------RGVSRRS 120
           AI GRDGYDFDGH LRVELAHGGR   SS D   SY     G RGG       RG SRRS
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR--RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRS 120

Query: 121 DFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           ++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LD
Sbjct: 121 EYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LD 180

Query: 181 DSEFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRNAFS  YVRVREYDS+RD SRSPSRGRSYS+ RS  RS SR RSRS+SRS+S+SP
Sbjct: 181 DTEFRNAFSHEYVRVREYDSRRD-SRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSP 240

Query: 241 KAKSSQRSPVKSRSRSASPARSRSKSSSLS 260
           KAKS +RSP KS SRS   +RSRSKS SLS
Sbjct: 241 KAKSLRRSPAKSTSRSPR-SRSRSKSRSLS 263

[Close]

BLAST of Tan0005436 vs. TAIR 10
Match: AT3G49430.1 (SER/ARG-rich protein 34A )

HSP 1 Score: 315.1 bits (806), Expect = 6.3e-86
Identity = 197/318 (61.95%), Postives = 230/318 (72.33%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+D
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR------YNSYGGSRGGR-----GVSRRS 120
           AI+GRDGY+ DG RLRVELAHGGRG SSS  R       + YGG  GG      GVSR S
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 121 DFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           +FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRAYVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRN ++R ++RV++Y+S R  SRSPSR RS SR RS SR R R  SRS+S SRSKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240

Query: 241 KAKSSQRSPVKSRSRSASPARSRSKSSSLSGSRSRSRSPVPNHEKRSSKSPKRRDASKSP 300
           +           +  S SP R      SLS S S+SRSP P+      KSP R   + S 
Sbjct: 241 R-----------KDLSKSPRR------SLSRSISKSRSPSPD----KKKSPPR---AMSR 294

Query: 301 SRSRSRSRSRSKSKSPSR 308
           S+SRSRSRSRS SKSP +
Sbjct: 301 SKSRSRSRSRSPSKSPPK 294

The following BLAST results are available for this feature:

BLAST of Tan0005436 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22315	2.9e-104	72.88	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
F4JHI7	1.4e-93	74.07	Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
A2RVS6	8.9e-85	61.95	Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q9XFR5	7.5e-84	69.74	Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
Q6NYA0	9.6e-55	56.49	Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV...	[more]

BLAST of Tan0005436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898762.1	6.4e-149	97.71	serine/arginine-rich-splicing factor SR34-like isoform X1 [Benincasa hispida]	[more]
XP_008451568.1	1.4e-148	97.07	PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis me...	[more]
XP_022148198.1	4.6e-147	96.41	serine/arginine-rich-splicing factor SR34-like isoform X1 [Momordica charantia]	[more]
XP_004136028.1	4.6e-147	96.41	serine/arginine-rich-splicing factor SR34 isoform X1 [Cucumis sativus] >KAE86463...	[more]
XP_023547992.1	5.1e-146	95.44	serine/arginine-rich-splicing factor SR34-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0005436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BR66	6.9e-149	97.07	serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1D3F5	2.2e-147	96.41	serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1GP36	5.5e-146	95.75	serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A1S3BRU3	2.1e-145	96.09	serine/arginine-rich-splicing factor SR34-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A6J1D4F6	6.7e-144	95.42	serine/arginine-rich-splicing factor SR34-like isoform X2 OS=Momordica charantia...	[more]

BLAST of Tan0005436 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02840.1	2.1e-105	72.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.3	2.1e-105	72.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.2	2.9e-99	75.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G02430.2	9.7e-95	74.07	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G49430.1	6.3e-86	61.95	SER/ARG-rich protein 34A	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 112..183 e-value: 9.1E-7 score: 38.5 coord: 8..78 e-value: 2.3E-23 score: 93.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..76 e-value: 3.5E-18 score: 65.2 coord: 113..175 e-value: 1.9E-10 score: 40.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..82 score: 18.80261
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 111..189 score: 9.524474
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 111..188 e-value: 1.9E-22 score: 80.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..109 e-value: 2.4E-28 score: 101.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..266
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..292
None	No IPR available	PANTHER	PTHR23147:SF198	PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEIN	coord: 2..292
None	No IPR available	CDD	cd12602	RRM2_SF2_plant_like	coord: 111..186 e-value: 1.25635E-47 score: 152.276
None	No IPR available	CDD	cd12599	RRM1_SF2_plant_like	coord: 8..79 e-value: 4.19854E-45 score: 145.68
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005436.1	Tan0005436.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding