Tan0005394 (gene) Snake gourd v1

Overview


Name	Tan0005394
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG02: 45242943 .. 45243524 (+)
RNA-Seq Expression	Tan0005394
Synteny	Tan0005394

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCTCTATCATAGCCTTACTTAAAAGCGACCGTTTAACTGGTGAGAATTTTACTACGTGGAAATCCAACCTGAATACGATTCTCGTTGTTGACGACCTACGGTTTGTACTGTCTGAGGAATGTCCACAAATCCCTGCTCGTAATGCTCCTCAATGCATTAAGGAGGCGCACGATCACATTTGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGAAATGTTTGGACAACCGTCTGGACAGATTCGAAACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCCGTGAGAGAACACGTTCTTGATCTGATGGTCCACTTCAACGTGGCTGAGATGAACGGAGCGGTCATTGAGGAGCAAAGTCAGGTATCGTTCATCCTTGAGTCTCTTTCGAAGAGTTTTCTGCAATTCCGCAACAATGCGGTGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCTAG

mRNA sequence

ATGTCGTCCTCTATCATAGCCTTACTTAAAAGCGACCGTTTAACTGGTGAGAATTTTACTACGTGGAAATCCAACCTGAATACGATTCTCGTTGTTGACGACCTACGGTTTGTACTGTCTGAGGAATGTCCACAAATCCCTGCTCGTAATGCTCCTCAATGCATTAAGGAGGCGCACGATCACATTTGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGAAATGTTTGGACAACCGTCTGGACAGATTCGAAACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCCGTGAGAGAACACGTTCTTGATCTGATGGTCCACTTCAACGTGGCTGAGATGAACGGAGCGGTCATTGAGGAGCAAAGTCAGGTATCGTTCATCCTTGAGTCTCTTTCGAAGAGTTTTCTGCAATTCCGCAACAATGCGGTGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCTAG

Coding sequence (CDS)

ATGTCGTCCTCTATCATAGCCTTACTTAAAAGCGACCGTTTAACTGGTGAGAATTTTACTACGTGGAAATCCAACCTGAATACGATTCTCGTTGTTGACGACCTACGGTTTGTACTGTCTGAGGAATGTCCACAAATCCCTGCTCGTAATGCTCCTCAATGCATTAAGGAGGCGCACGATCACATTTGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGAAATGTTTGGACAACCGTCTGGACAGATTCGAAACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCCGTGAGAGAACACGTTCTTGATCTGATGGTCCACTTCAACGTGGCTGAGATGAACGGAGCGGTCATTGAGGAGCAAAGTCAGGTATCGTTCATCCTTGAGTCTCTTTCGAAGAGTTTTCTGCAATTCCGCAACAATGCGGTGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCTAG

Protein sequence

MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHDHIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYNSRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIEYNLTTLLNELQTF

Homology

[Close]

BLAST of Tan0005394 vs. NCBI nr
Match: KAA0063887.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 5.4e-69
Identity = 137/193 (70.98%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           MSSSIIALLK D+LTGEN+ TWKS LN ILV+ DLRFVL EECP  P +NA Q +K+A+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECPPFPTQNASQSVKDAYD 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
           H W KANDKA +Y+LAS+S++L+KKHE MV+AR+IM SL+EMFGQPS QI+ E++KYVYN
Sbjct: 61  H-WTKANDKASLYMLASLSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEAIKYVYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RMKEG SVREHVL ++V+FNVAEMN A+ +E+SQVS+IL+SLSKSFLQF +N  MNKIE
Sbjct: 121 ARMKEGQSVREHVLGMIVNFNVAEMNKAIFDEKSQVSYILKSLSKSFLQFCSNVKMNKIE 180

Query: 181 YNLTTLLNELQTF 194
           YN+TTLL ELQTF
Sbjct: 181 YNMTTLLKELQTF 192

[Close]

BLAST of Tan0005394 vs. NCBI nr
Match: TYK15919.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 5.4e-69
Identity = 137/193 (70.98%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           MSSSIIALLK D+LTGEN+ TWKS LN ILV+ DLRFVL EECP  P +NA Q +K+A+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECPPFPTQNASQSVKDAYD 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
           H W KANDKA +Y+LAS+S++L+KKHE MV+AR+IM SL+EMFGQPS QI+ E++KYVYN
Sbjct: 61  H-WTKANDKASLYMLASLSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEAIKYVYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RMKEG SVREHVL ++V+FNVAEMN A+ +E+SQVS+IL+SLSKSFLQF +N  MNKIE
Sbjct: 121 ARMKEGQSVREHVLGMIVNFNVAEMNKAIFDEKSQVSYILKSLSKSFLQFCSNVKMNKIE 180

Query: 181 YNLTTLLNELQTF 194
           YN+TTLL ELQTF
Sbjct: 181 YNMTTLLKELQTF 192

[Close]

BLAST of Tan0005394 vs. NCBI nr
Match: KAA0061339.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.2 bits (692), Expect = 7.0e-69
Identity = 133/193 (68.91%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+  WK+ +NT+L++DDLRFVL EECPQ+PA NA Q ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYAAWKNTINTVLIIDDLRFVLVEECPQVPAANATQTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNIMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

[Close]

BLAST of Tan0005394 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 132/193 (68.39%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+ +WK+ +NT+L++DDLRFVL EECPQ+PA NA + ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

[Close]

BLAST of Tan0005394 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 132/193 (68.39%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+ +WK+ +NT+L++DDLRFVL EECPQ+PA NA + ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

[Close]

BLAST of Tan0005394 vs. ExPASy TrEMBL
Match: A0A5D3D0D9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00210 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 137/193 (70.98%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           MSSSIIALLK D+LTGEN+ TWKS LN ILV+ DLRFVL EECP  P +NA Q +K+A+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECPPFPTQNASQSVKDAYD 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
           H W KANDKA +Y+LAS+S++L+KKHE MV+AR+IM SL+EMFGQPS QI+ E++KYVYN
Sbjct: 61  H-WTKANDKASLYMLASLSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEAIKYVYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RMKEG SVREHVL ++V+FNVAEMN A+ +E+SQVS+IL+SLSKSFLQF +N  MNKIE
Sbjct: 121 ARMKEGQSVREHVLGMIVNFNVAEMNKAIFDEKSQVSYILKSLSKSFLQFCSNVKMNKIE 180

Query: 181 YNLTTLLNELQTF 194
           YN+TTLL ELQTF
Sbjct: 181 YNMTTLLKELQTF 192

[Close]

BLAST of Tan0005394 vs. ExPASy TrEMBL
Match: A0A5A7VA67 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00110 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 137/193 (70.98%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           MSSSIIALLK D+LTGEN+ TWKS LN ILV+ DLRFVL EECP  P +NA Q +K+A+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECPPFPTQNASQSVKDAYD 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
           H W KANDKA +Y+LAS+S++L+KKHE MV+AR+IM SL+EMFGQPS QI+ E++KYVYN
Sbjct: 61  H-WTKANDKASLYMLASLSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEAIKYVYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RMKEG SVREHVL ++V+FNVAEMN A+ +E+SQVS+IL+SLSKSFLQF +N  MNKIE
Sbjct: 121 ARMKEGQSVREHVLGMIVNFNVAEMNKAIFDEKSQVSYILKSLSKSFLQFCSNVKMNKIE 180

Query: 181 YNLTTLLNELQTF 194
           YN+TTLL ELQTF
Sbjct: 181 YNMTTLLKELQTF 192

[Close]

BLAST of Tan0005394 vs. ExPASy TrEMBL
Match: A0A5A7V6N0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00160 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 133/193 (68.91%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+  WK+ +NT+L++DDLRFVL EECPQ+PA NA Q ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYAAWKNTINTVLIIDDLRFVLVEECPQVPAANATQTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNIMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

[Close]

BLAST of Tan0005394 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69
Identity = 132/193 (68.39%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+ +WK+ +NT+L++DDLRFVL EECPQ+PA NA + ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

[Close]

BLAST of Tan0005394 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69
Identity = 132/193 (68.39%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSSSIIALLKSDRLTGENFTTWKSNLNTILVVDDLRFVLSEECPQIPARNAPQCIKEAHD 60
           M+S+ + +L +D+L G N+ +WK+ +NT+L++DDLRFVL EECPQ+PA NA + ++E ++
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  HIWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQEMFGQPSGQIRNESLKYVYN 120
             W KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQEMFGQ S QI++++LKY+YN
Sbjct: 61  R-WAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYN 120

Query: 121 SRMKEGSSVREHVLDLMVHFNVAEMNGAVIEEQSQVSFILESLSKSFLQFRNNAVMNKIE 180
           +RM EG+SVREHVL++MVHFNVAEMNGAVI+E SQVSFILESL +SFLQFR+NAVMNKI 
Sbjct: 121 ARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIA 180

Query: 181 YNLTTLLNELQTF 194
           Y LTTLLNELQTF
Sbjct: 181 YTLTTLLNELQTF 192

The following BLAST results are available for this feature:

BLAST of Tan0005394 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005394 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063887.1	5.4e-69	70.98	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK15919.1	5.4e-69	70.98	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0061339.1	7.0e-69	68.91	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0044955.1	1.6e-68	68.39	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	1.6e-68	68.39	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0005394 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0D9	2.6e-69	70.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00210...	[more]
A0A5A7VA67	2.6e-69	70.98	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G0011...	[more]
A0A5A7V6N0	3.4e-69	68.91	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G0016...	[more]
A0A5A7SMH8	7.6e-69	68.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	7.6e-69	68.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]

BLAST of Tan0005394 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 63..191 e-value: 7.2E-15 score: 55.0
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 19..191
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 19..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005394.1	Tan0005394.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding