Tan0005382 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGGTCCTCTTCTTATAGCAGCTTGAGATCCAAATCAACAAGAGAAGATCTTTGGATTTCTGAAAGAAAAATGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGATTTTGATCATCATCAACAACTTGAAAAGGTCAGTGGCAGTAATGTAATTATATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCAAAGTACTTGACCCATCCTTTGTTAAATGCTTTGATTGACAAATCCAAGGCTAAGGCTAATGAAGATTATGATAATAATAATAATAATAATGTCATTTCAGTGAGATGTGAAGTTGTTCTGTTTGATCATCTTTTGTGGATGTTGGAAAACTCTGATCCAAATATCAGTTTTGATTCAAATTTGGAGGAATTGGCTGAGCTTTATGTGTTTTGA ATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGGTCCTCTTCTTATAGCAGCTTGAGATCCAAATCAACAAGAGAAGATCTTTGGATTTCTGAAAGAAAAATGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGATTTTGATCATCATCAACAACTTGAAAAGGTCAGTGGCAGTAATGTAATTATATATGTTGGAATTGTTCTGTTTGATCATCTTTTGTGGATGTTGGAAAACTCTGATCCAAATATCAGTTTTGATTCAAATTTGGAGGAATTGGCTGAGCTTTATGTGTTTTGA ATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGGTCCTCTTCTTATAGCAGCTTGAGATCCAAATCAACAAGAGAAGATCTTTGGATTTCTGAAAGAAAAATGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGATTTTGATCATCATCAACAACTTGAAAAGGTCAGTGGCAGTAATGTAATTATATATGTTGGAATTGTTCTGTTTGATCATCTTTTGTGGATGTTGGAAAACTCTGATCCAAATATCAGTTTTGATTCAAATTTGGAGGAATTGGCTGAGCTTTATGTGTTTTGA MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVGIVLFDHLLWMLENSDPNISFDSNLEELAELYVF Homology
BLAST of Tan0005382 vs. NCBI nr
Match: XP_023536060.1 (auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31 Identity = 89/152 (58.55%), Postives = 96/152 (63.16%), Query Frame = 0
BLAST of Tan0005382 vs. NCBI nr
Match: KAG7024703.1 (hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.4 bits (355), Expect = 4.7e-30 Identity = 89/156 (57.05%), Postives = 96/156 (61.54%), Query Frame = 0
BLAST of Tan0005382 vs. NCBI nr
Match: XP_022135446.1 (uncharacterized protein LOC111007398 [Momordica charantia]) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29 Identity = 91/152 (59.87%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Tan0005382 vs. NCBI nr
Match: XP_038899559.1 (auxin-responsive protein SAUR78 [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 4.4e-28 Identity = 86/154 (55.84%), Postives = 96/154 (62.34%), Query Frame = 0
BLAST of Tan0005382 vs. NCBI nr
Match: XP_011653970.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical protein Csa_012026 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 6.3e-27 Identity = 87/161 (54.04%), Postives = 95/161 (59.01%), Query Frame = 0
BLAST of Tan0005382 vs. ExPASy TrEMBL
Match: A0A0A0L464 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G607030 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 8.9e-35 Identity = 88/108 (81.48%), Postives = 95/108 (87.96%), Query Frame = 0
BLAST of Tan0005382 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 8.6e-30 Identity = 91/152 (59.87%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Tan0005382 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.4e-25 Identity = 84/163 (51.53%), Postives = 94/163 (57.67%), Query Frame = 0
BLAST of Tan0005382 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.8e-19 Identity = 71/131 (54.20%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of Tan0005382 vs. ExPASy TrEMBL
Match: A0A2C9UHW2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G016100 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.4e-18 Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of Tan0005382 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 49.3 bits (116), Expect = 2.2e-06 Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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