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Tan0005350 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACGACGGTGCCAAATCGAGCCTAGGTCTTCAATTTCCCTATTGTATTGGGCCACAATGATAAAACAATGGCCCATTTTCCTTTCCAAGTCTACGCCGACACTGTACACGCCGTTTTCTTCTGCTAGAGAGAGAAAATAGAGTGAAAAAAATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCGTAAGACTCCATTTTACCTTTTCAATTCCCACTCATTTGATTGAACCGAATCTTTCTAGGGTTACTCTTTTCAATTCCATCGCTCATCTGATTTTTCTCTCTTCCTTCAATTTCTTCGACTCTGGGAGTGTAGATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGTATGTCTTTCTCCTTCCAATTTTGCATCCCTTTATCTCTGCATCGGATTCTTAACTGCAATTGTAGCTAATTATACATTTTTGTGCTTGATGTTACGGTGTTTGTCAGTTTAGTCTCTGTTGGTTTAATTATATCTTTCTGTTCGTCAATGTTGAAATGGGTTGATAGCAGTGAGTTAGCATAAGTTTAGAAGAGAGGAAATTTTGCAATTCTACCAATTTCTTAGAAACTTGGAGTAGAAATAAGAAACTTTCCTCTCTGAATAGGTATAATATCATGTAATTAAGTTTATTATATGCCAATATTAATATTGACTTTGCACGTAGCTCAACTAGTTAACTCCAATATGTTATTGAATTCAAGAATAATATTGAAACATAAGTAACTAAATTGAAGCTTTTTGAACATGGACTAAAGTGAAAAAGTGACTCAAAACATATATTTAGCTAGTCTGAATCTAATTGCAAGATTGACACGAGTGTTTTTGGAATCAGGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGAATTTAAATCCAAAAACCCCCTAACAATAAGTTCTCTCTTTCTCACTCTTATTCCTCTTTTTATTTAAACATATGAAAATTATCTATATTCTAACTTGGGCAGTGATTTGAATTGACATATGTTATATAAACTCAATCCTTGTTCTTGTTTGAGCTCAATCTATCTAAACCCATTGTCCGCC CAAACGACGGTGCCAAATCGAGCCTAGGTCTTCAATTTCCCTATTGTATTGGGCCACAATGATAAAACAATGGCCCATTTTCCTTTCCAAGTCTACGCCGACACTGTACACGCCGTTTTCTTCTGCTAGAGAGAGAAAATAGAGTGAAAAAAATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGAATTTAAATCCAAAAACCCCCTAACAATAAGTTCTCTCTTTCTCACTCTTATTCCTCTTTTTATTTAAACATATGAAAATTATCTATATTCTAACTTGGGCAGTGATTTGAATTGACATATGTTATATAAACTCAATCCTTGTTCTTGTTTGAGCTCAATCTATCTAAACCCATTGTCCGCC ATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGA MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASG Homology
BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2) HSP 1 Score: 166.4 bits (420), Expect = 2.4e-40 Identity = 79/133 (59.40%), Postives = 105/133 (78.95%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.6e-28 Identity = 63/126 (50.00%), Postives = 93/126 (73.81%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2) HSP 1 Score: 121.7 bits (304), Expect = 6.7e-27 Identity = 56/112 (50.00%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 8.7e-27 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Tan0005350 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida]) HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67 Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of Tan0005350 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 131/142 (92.25%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Tan0005350 vs. NCBI nr
Match: XP_022971509.1 (thioredoxin H2-like [Cucurbita maxima]) HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65 Identity = 131/142 (92.25%), Postives = 134/142 (94.37%), Query Frame = 0
BLAST of Tan0005350 vs. NCBI nr
Match: XP_022934421.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cucurbita pepo subsp. pepo] >KAG7017722.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257.3 bits (656), Expect = 7.7e-65 Identity = 129/138 (93.48%), Postives = 134/138 (97.10%), Query Frame = 0
BLAST of Tan0005350 vs. NCBI nr
Match: KAG6580981.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64 Identity = 128/138 (92.75%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.8e-66 Identity = 131/142 (92.25%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1I8S1 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65 Identity = 131/142 (92.25%), Postives = 134/142 (94.37%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65 Identity = 129/138 (93.48%), Postives = 134/138 (97.10%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1J3L5 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64 Identity = 128/138 (92.75%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64 Identity = 126/142 (88.73%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of Tan0005350 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 ) HSP 1 Score: 166.4 bits (420), Expect = 1.7e-41 Identity = 79/133 (59.40%), Postives = 105/133 (78.95%), Query Frame = 0
BLAST of Tan0005350 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 121.7 bits (304), Expect = 4.7e-28 Identity = 56/112 (50.00%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of Tan0005350 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Tan0005350 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Tan0005350 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27 Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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