
Tan0005345 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAGCGTCTTCTATATCTCTAGGGTTTTAGATTTTAAGCTTGGCAGTTCCAACTTCAGAGCACACTTAAAAAATGGCAGAAGAGACAACCCCAATTCCTGAACTCGCTGAAAACGATACGGAGGTAACCAACTCGACCACCGATGATATGGAACTGGTAAGCACAGAGCCGAAAGGATTAAGTGGTGATTCTGATGCAAATGAGGCCGCTGCAGTAACGAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAAGAAGGCGCCGATGAAAATGTCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCAGTTGAAGAGGAAAGGCTTGAGAAGGCGGAAACAGATGGGAAAGGAGAGGAGGAGCCTGGTCCTGTGAGTTTAGGCCCCAAGAGCTTTGGATCATCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTTCACCACTGGCCTGCCAACTTGAACGTGAACCAGGTATAATATTACGGACTTCTTTTATCTGCTATAGTTCCTTTTTGTTATTGGAAAGGATAAGAATAACGTTGATTTTTCGTTAGAAGGTATCTTTGAAACTTGATTGTAAGAAATTTTAGTGTTTCTACTAAATGCTGCTGATTTTGTTCATCATCGTCATTACTTTAGTGTGTAAAAGATACATGTCGCTAAAGAAGAAAGAAAATTACAAAATGAGGTGGAGAACTAAGATCTCTATGCTCATGAAAGGGGAATGGTTCATTAGTTTTAGCAGAAGGGGACTCTTGTTTGAACTTATTAATTTTTTTTCCGCATTCTCTACCCAAAATATTTTTGTGTCAATCAATTTGATATAAAGCTTTTACTACTTTTTTAATCTTTTATGTCTTATGATTCATGAATTACTGTCTAGTGTCAGTAAAGTGGCTTGGGTTTATAATATATTGTGGACGCAATTCATTTAACACTTAATTATTGTAGTTGTCTTGTTGGAGAATAAGCTTGTATTTGTGGACAAGTTAGAATCTGAGACGTGTTATTCTTCAATATTCTGATGGAGATTGATGATGTTTGCTTCTTAACTTTTAAAAGTTTGAGGTCTTTACTTCTCAGAGTTCCTTCATAGGCACACTGAAGTGTATTATGTTTTTGTCTCTTTAAATTGTATTATATTTAGTTGATCGACAATATTTCTTGGCAAGCAACTGGGTGAGGATTTGAAATTATGATCAGCATCAGTTTATCAAGAAAGGTTTATTTAATTGGTCCTGTATTCGATGAACATATTTTCCTGTGCATGTTTATTTAAAGATCTCTATATTTCTTGCTTGGTGAATTATTTAAGGCATCCTATGATTGAGTTTATTTTAATGGAAAACCACAAGATCCTTTTGGTTGTTCTATCAGATTGATTTAGTGGTTGGCTTGATCTTATTCAATTTATAGAAAAAATATACTGGTTGATTTGGTTGTGATCCGTTTGTTGATTTTTCAGTCAATTCTCAAATTTTTCTTAACTGTCTGTTGATTTGGTGTCAGTTTTGGTCAAAACCCATTTACATCTTTTGATCTTTAGATGGGGCTGTTTGACATAATTGAACATGGGAAATGGAATATGTGTCATTTATAAAACCTCCACCCTGAAAGAATAAATTTTATTTGTTACTTTGAACGTATACTCTTCTGGCCTGATTTGCTCATTGAAGATTTTCTTTCAGCAGCTTCTTCTGTATTGTTGTGTTGTTATTCTTCATGATTCCCTTGTATTGTTGATTGATTTGAGATGAAGAAATGGATATGCTTTATCTATTTTAGTACTTCTGGCATATCCTCTGTCTCTGATTTAAGTGTAAGAGCCGCACTAAGCCACTGTACCTCTATGGGACAATTTTGCAGTCCAAAGGGGGAAGTTATTGTTAGTGTTTGGAAATCCATGTATTCTTGGCCGGTTACCGTCTGTGATCCCATGAGGACTTCGTTATGAAATAATTCTTAAATCAAAAGGAAGTCAAGTGTTATTCTTTGTATTCCGCATCAATTGTTAGTACTTCTGTTGTATTTTCTTTTCAATAGTCTTTTGCATTCTGTCTAAATCTTGCTTCACATAGTATTTTGTTTTAGCCAACCTTAACGTAGCTCAAATGGTTAAACATTAGTGGAGGTTCAAATTTTTGTTCTCTGTTTGAATGGTAATATTAAGAAAAAGAGGTGTGTTCCTTGTCAGCCATGTTTCCCATTGAGTCAGTGTCGTTCTAAGGCAAAACATGGACTTAGAACATTTAGTCCAGAATATTTTCAACTTGATATGAAACATTTAGGAGCTATTTGAGGTGTGGGTTATAATAGTATGAGGAATACTCTACACCCCAAACTATTGTAACCCAAATTAAATAATTCTGCATTTTAAACACAAATTATATAACTCAATAGACTATTATAACCCAATCAAGCTCCAAACAGCCTTTTATAGTTGATCAAATTTACTGTCGAAGATATTGTTTCATGGTAAAAATATTTGCATGTTGAGGTGCATTAACTCTAAAGATGAGCAATATTTGATATTTGTTTCTGTGGCAGTACGAGCAGATGGTGCTGCTGGATTTGATTAAGAAGGGGCATGTAGAACCAGACAAAAAGATCGGTTGTGGTATTCGTGCCTTCCAAATTCAATACCATCCAATGTGGAAAAGCAAGTGCTTCTTCCTAATTCGGGAGGATGGGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCTCTGCCTGAAAACTTGAAGGCAAAATCTGATGCAAACAGGGCATTAGGTGGTGGTAAGCACCGCGGTGGAGGACGAGGTGGAGGTGGCGGCGGCGGTGGACGTGGAAGAGGGGGTAGGTGGAGAAACTGATGTCTTTCCCAAGTTCTTTCAGTTTCACCACTTTGGAGTCAGTTTTCCTGCGAAGAATTTACGCCCAAATCCCAGGCCCAACCAGGTCTCTGTTTGCCTCGAGTTCAAGGAAGAAAGTAGAGAAATAATTTATTTATGCCCATAATTTATGTTTTTTATGCTTTTTTACCGGTGCTGATGTGATCTTTGAACTCAAAATTAGGGAGTATACTTTCATAACGAATAATTATGGAAGGATGAGTCTTTAGTTCAATTTTAATTTTAGAGATGATTTCTTGAGTACTATCCAAGATTCTTAATTTTGTAGTTGCGTGGTGGATTTTTTTTTCCCCCTTTAAGTTCAACAACATAGAGATGGGTGTGGTGGATAGTTTAATTCTTTAATTTAATGACATCTTAGAATTATATTAAGTTGATCTGGA AAAATAGCGTCTTCTATATCTCTAGGGTTTTAGATTTTAAGCTTGGCAGTTCCAACTTCAGAGCACACTTAAAAAATGGCAGAAGAGACAACCCCAATTCCTGAACTCGCTGAAAACGATACGGAGGTAACCAACTCGACCACCGATGATATGGAACTGGTAAGCACAGAGCCGAAAGGATTAAGTGGTGATTCTGATGCAAATGAGGCCGCTGCAGTAACGAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAAGAAGGCGCCGATGAAAATGTCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCAGTTGAAGAGGAAAGGCTTGAGAAGGCGGAAACAGATGGGAAAGGAGAGGAGGAGCCTGGTCCTGTGAGTTTAGGCCCCAAGAGCTTTGGATCATCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTTCACCACTGGCCTGCCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGCTGGATTTGATTAAGAAGGGGCATGTAGAACCAGACAAAAAGATCGGTTGTGGTATTCGTGCCTTCCAAATTCAATACCATCCAATGTGGAAAAGCAAGTGCTTCTTCCTAATTCGGGAGGATGGGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCTCTGCCTGAAAACTTGAAGGCAAAATCTGATGCAAACAGGGCATTAGGTGGTGGTAAGCACCGCGGTGGAGGACGAGGTGGAGGTGGCGGCGGCGGTGGACGTGGAAGAGGGGGTAGGTGGAGAAACTGATGTCTTTCCCAAGTTCTTTCAGTTTCACCACTTTGGAGTCAGTTTTCCTGCGAAGAATTTACGCCCAAATCCCAGGCCCAACCAGGTCTCTGTTTGCCTCGAGTTCAAGGAAGAAAGTAGAGAAATAATTTATTTATGCCCATAATTTATGTTTTTTATGCTTTTTTACCGGTGCTGATGTGATCTTTGAACTCAAAATTAGGGAGTATACTTTCATAACGAATAATTATGGAAGGATGAGTCTTTAGTTCAATTTTAATTTTAGAGATGATTTCTTGAGTACTATCCAAGATTCTTAATTTTGTAGTTGCGTGGTGGATTTTTTTTTCCCCCTTTAAGTTCAACAACATAGAGATGGGTGTGGTGGATAGTTTAATTCTTTAATTTAATGACATCTTAGAATTATATTAAGTTGATCTGGA ATGGCAGAAGAGACAACCCCAATTCCTGAACTCGCTGAAAACGATACGGAGGTAACCAACTCGACCACCGATGATATGGAACTGGTAAGCACAGAGCCGAAAGGATTAAGTGGTGATTCTGATGCAAATGAGGCCGCTGCAGTAACGAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAAGAAGGCGCCGATGAAAATGTCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCAGTTGAAGAGGAAAGGCTTGAGAAGGCGGAAACAGATGGGAAAGGAGAGGAGGAGCCTGGTCCTGTGAGTTTAGGCCCCAAGAGCTTTGGATCATCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTTCACCACTGGCCTGCCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGCTGGATTTGATTAAGAAGGGGCATGTAGAACCAGACAAAAAGATCGGTTGTGGTATTCGTGCCTTCCAAATTCAATACCATCCAATGTGGAAAAGCAAGTGCTTCTTCCTAATTCGGGAGGATGGGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCTCTGCCTGAAAACTTGAAGGCAAAATCTGATGCAAACAGGGCATTAGGTGGTGGTAAGCACCGCGGTGGAGGACGAGGTGGAGGTGGCGGCGGCGGTGGACGTGGAAGAGGGGGTAGGTGGAGAAACTGA MAEETTPIPELAENDTEVTNSTTDDMELVSTEPKGLSGDSDANEAAAVTNGDANSKREREEEGADENVGEAKKPKVEKSVEEERLEKAETDGKGEEEPGPVSLGPKSFGSSVELFDYFYKFLHHWPANLNVNQYEQMVLLDLIKKGHVEPDKKIGCGIRAFQIQYHPMWKSKCFFLIREDGSADDFSFRKCVDHILPLPENLKAKSDANRALGGGKHRGGGRGGGGGGGGRGRGGRWRN Homology
BLAST of Tan0005345 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.5e-50 Identity = 125/238 (52.52%), Postives = 149/238 (62.61%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06 Identity = 41/142 (28.87%), Postives = 68/142 (47.89%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04 Identity = 20/73 (27.40%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy Swiss-Prot
Match: Q9LQ02 (DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPD1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04 Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 0
BLAST of Tan0005345 vs. NCBI nr
Match: XP_022933555.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]) HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101 Identity = 203/239 (84.94%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Tan0005345 vs. NCBI nr
Match: KAG7021514.1 (Protein EMBRYO DEFECTIVE [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.3 bits (965), Expect = 1.9e-100 Identity = 201/239 (84.10%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Tan0005345 vs. NCBI nr
Match: XP_022972943.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita maxima]) HSP 1 Score: 375.6 bits (963), Expect = 3.3e-100 Identity = 202/239 (84.52%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Tan0005345 vs. NCBI nr
Match: XP_023529405.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 371.7 bits (953), Expect = 4.7e-99 Identity = 201/239 (84.10%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Tan0005345 vs. NCBI nr
Match: XP_022135230.1 (protein EMBRYO DEFECTIVE 514 [Momordica charantia]) HSP 1 Score: 362.1 bits (928), Expect = 3.8e-96 Identity = 197/243 (81.07%), Postives = 217/243 (89.30%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy TrEMBL
Match: A0A6J1F569 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101 Identity = 203/239 (84.94%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy TrEMBL
Match: A0A6J1IBL1 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111471455 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100 Identity = 202/239 (84.52%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy TrEMBL
Match: A0A6J1C0K4 (protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.8e-96 Identity = 197/243 (81.07%), Postives = 217/243 (89.30%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy TrEMBL
Match: A0A5A7UQ03 (Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002450 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.2e-89 Identity = 189/239 (79.08%), Postives = 206/239 (86.19%), Query Frame = 0
BLAST of Tan0005345 vs. ExPASy TrEMBL
Match: A0A1S3BWT9 (protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493992 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.2e-89 Identity = 189/239 (79.08%), Postives = 206/239 (86.19%), Query Frame = 0
BLAST of Tan0005345 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 200.3 bits (508), Expect = 1.8e-51 Identity = 125/238 (52.52%), Postives = 149/238 (62.61%), Query Frame = 0
BLAST of Tan0005345 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 55.1 bits (131), Expect = 9.2e-08 Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 0
BLAST of Tan0005345 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) ) HSP 1 Score: 55.1 bits (131), Expect = 9.2e-08 Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 0
BLAST of Tan0005345 vs. TAIR 10
Match: AT1G63020.1 (nuclear RNA polymerase D1A ) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05 Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 0
BLAST of Tan0005345 vs. TAIR 10
Match: AT1G63020.2 (nuclear RNA polymerase D1A ) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05 Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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