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Tan0005298 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCCTCTCAAATCTCTCCTCTTTCTCAACTTCCTCCTCCTAATTTCTCCCTCCTCCACCGCCGCCGCCACCGCTCGCCGTCTCGACGACACCGCCGTCCCGACAACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCACCGCCGCCGGTTTACCCATCTCCACCGCCGCCGTCTCCTCCACCGCCGGACGTCGTCATCTACTACTCTCCTCCACCCCCCAAGAAGAAGGAGCCCAAGAACACCAACTGCCCGCCGCCGCCGCCGTCTCCCTCTTTCATGTACATAACCGGTCCTCCCGGCGACCTCTATCCCATCGATCAGAATTATAACGCCGCCTGCCGGAGACTCGTCTCCGCCGCGTCCTCCGCCGTGGTTGGGTTGGCTCTGGCCGGGGTTCTGCTTGTTTAATAAGCGGCCGGTGGGAATGGGAAACTCAATCGAATTTCTCGTGAAGGTAAAACTAAATCCTCTCTACGAGATTTTCGATTTGGGATTGTTTTTAGAATTTTTATGGATCATCTCCGCATCATTTTCTTGTCTAATAATTTTGTAATTTGTACTAAATATTATTGAATTGTCCAGAAATTTGTGATCACCAAAAGAAAATTTCTGTGTTTTTTGTTTAGCTTACTTTTTCGAAATTTATTTTTCCCTTTTTTCAATCATAATCAGAGAAATATTAGGTCAGCTTTTTTATGTGAGATTATAACCTTTTTCTTTCTTTTTTTTTTTCCTTTCCGTTTTTCTTATTCAATATGAGTGGATTCAATTCAATCGTTATCATCACTCAACCATATAATTGAATTCTATCTAGAATAATATTATAGTTAAATCGATGACGTCTTATTGATTTAAGATTAATTCCCCTCCATTAAGAATTAAAACGGTTATATTAATTTTTGTTTTGTGACGGCAAAGAGTAAAGACCATTTTTTTTCAAACTTTTAATCTCAAATAGAAATAAGAAAATAATAATAATAATCACCCAAATATAGCTTAATCACTTTTTCTTTTTTTTATGTGACATGCTTAGTCACCAGATATCTATTTATTAGGTGAGTTTGAAATATTACCCTTTGCTTATAATGAAACCTTCATATTTAAAGGGGAAGAAGAAAAAGAGATTAGCAATAATCATACTTGAAAGAAAAAAAAATGCCACCAAAATAATTATTTCTTAATGAAAATGATATAATCTTGGATTATCTAGAGAAATCCATTAACAAATAATTCCGAAAATTGGTTTGTCATTTGGGTCCCTCGGTTGTTAAAATGGGACTTGCGATTACCATTACTATATAAATATTCTCAAACGAGGTCGTTTTCTCTATTAAAAAAACAACTTTTTTTTTCTTTTAGTAAGTAGTTATAAACTCTAAACCAATCAAACTTTATCAATTTAACTGTCACTAATCTATCAATTAGGTTTGATCAATTAAAAAAGTTAAAATATATCAACTAGGTTTGATCAATTTAAAAAGTGAAAGCGCGCCATGTTAAATAATAGCATACTTAAAATAAGTTAACCACGTGCAATTTTAAGTATAAATTCATTTTTTTCTTATTTTTTATTTTATTTTGTTTTAATTTAAAGAAAATACGACTCAAAAATTTTCTCAATTTTTTAAAATTTTGTAGGAAGAATTAGATTTTTTTTAATTTTTTATTTTGCTTTACCAAGCTTTTATTAATATCCTAACTATGATCTGAATTTTGAAGGATACATACAACAATTAGAGACTAAAATATATTTTAAAGAAAAATAAAAGAAATTATTTTAAAAAGTAAAGAATAAAATAAAATGAATGTTAATGGAGGAGTGACGATTATGGTGAGTCTGGCCAAAAACGAGTGGAGGGCAAAAGAGTAAATTCGGCATGTGGGCCTGATGATTATGGTGATGACACGCGTCGTGGTTCAAATACCGAGGTGGAATTTGCGTATTGTACTTTTAAAATGGGGAGGCGATCCCGAGCCATTGGATCGGGTGTCAGAGATTTTGAGATGCGATCAGATCAGGTTTTCCGAGGATGA ATGCTTCCTCTCAAATCTCTCCTCTTTCTCAACTTCCTCCTCCTAATTTCTCCCTCCTCCACCGCCGCCGCCACCGCTCGCCGTCTCGACGACACCGCCGTCCCGACAACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCACCGCCGCCGGTTTACCCATCTCCACCGCCGCCGTCTCCTCCACCGCCGGACGTCGTCATCTACTACTCTCCTCCACCCCCCAAGAAGAAGGAGCCCAAGAACACCAACTGCCCGCCGCCGCCGCCGTCTCCCTCTTTCATGTACATAACCGGTCCTCCCGGCGACCTCTATCCCATCGATCAGAATTATAACGCCGCCTGCCGGAGACTCGTCTCCGCCGCGTCCTCCGCCGTGGTTGGGAGTGACGATTATGGTGAGTCTGGCCAAAAACGAGTGGAGGGCAAAAGAGTAAATTCGGCATGTGGGCCTGATGATTATGGTGATGACACGCGTCGTGGTTCAAATACCGAGGTGGAATTTGCGTATTGTACTTTTAAAATGGGGAGGCGATCCCGAGCCATTGGATCGGGTGTCAGAGATTTTGAGATGCGATCAGATCAGGTTTTCCGAGGATGA ATGCTTCCTCTCAAATCTCTCCTCTTTCTCAACTTCCTCCTCCTAATTTCTCCCTCCTCCACCGCCGCCGCCACCGCTCGCCGTCTCGACGACACCGCCGTCCCGACAACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCACCGCCGCCGGTTTACCCATCTCCACCGCCGCCGTCTCCTCCACCGCCGGACGTCGTCATCTACTACTCTCCTCCACCCCCCAAGAAGAAGGAGCCCAAGAACACCAACTGCCCGCCGCCGCCGCCGTCTCCCTCTTTCATGTACATAACCGGTCCTCCCGGCGACCTCTATCCCATCGATCAGAATTATAACGCCGCCTGCCGGAGACTCGTCTCCGCCGCGTCCTCCGCCGTGGTTGGGAGTGACGATTATGGTGAGTCTGGCCAAAAACGAGTGGAGGGCAAAAGAGTAAATTCGGCATGTGGGCCTGATGATTATGGTGATGACACGCGTCGTGGTTCAAATACCGAGGTGGAATTTGCGTATTGTACTTTTAAAATGGGGAGGCGATCCCGAGCCATTGGATCGGGTGTCAGAGATTTTGAGATGCGATCAGATCAGGTTTTCCGAGGATGA MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVGSDDYGESGQKRVEGKRVNSACGPDDYGDDTRRGSNTEVEFAYCTFKMGRRSRAIGSGVRDFEMRSDQVFRG Homology
BLAST of Tan0005298 vs. NCBI nr
Match: XP_022989990.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45 Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0
BLAST of Tan0005298 vs. NCBI nr
Match: XP_008467156.1 (PREDICTED: extensin-like [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 2.6e-45 Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Tan0005298 vs. NCBI nr
Match: XP_023520933.1 (extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 188.3 bits (477), Expect = 6.4e-44 Identity = 110/137 (80.29%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Tan0005298 vs. NCBI nr
Match: KAG6601837.1 (hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.4 bits (472), Expect = 2.4e-43 Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Tan0005298 vs. NCBI nr
Match: KAG7032543.1 (hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.0 bits (471), Expect = 3.2e-43 Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Tan0005298 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 9.7e-46 Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0
BLAST of Tan0005298 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Tan0005298 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 4.5e-43 Identity = 109/136 (80.15%), Postives = 118/136 (86.76%), Query Frame = 0
BLAST of Tan0005298 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.9e-42 Identity = 110/137 (80.29%), Postives = 115/137 (83.94%), Query Frame = 0
BLAST of Tan0005298 vs. ExPASy TrEMBL
Match: A0A6J1DDL2 (acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42 Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of Tan0005298 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Tan0005298 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11 Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of Tan0005298 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07 Identity = 44/84 (52.38%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of Tan0005298 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 39/85 (45.88%), Postives = 43/85 (50.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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