Tan0005238 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAAGCTCCTTCGCTGCTCTTTCTGTGCACAGCCCTAGTAAGGGACGAAATTGTTCAAAGTAATCATCTCCATAGTTCTTGTGTTACTTATACTCTGTTCCTCCGTATTCGTTTCTCTTCCTTGTTTTCTTAATGCGTCGCTCTCTTTGACTGTTAGGGGATGACGTTCCACCGGCTATCTATGACCTTCCTCCTCACCTGTTGGATGCTCTGGCTTCGCAGCTGCCACCGTTGGCTTTACAGAATTTACAGTCAGGAATGTACGTCGCCCCACCCCGATTAAGTTGTTATCTTTTATTACCATTTAGCTTGGTTGAAGGCTGTCAAATCCATGTGGTTGGTAGTGTGCACGAGTATTGCATTGAAAATTGA ATGGCGGAAGCTCCTTCGCTGCTCTTTCTGTGCACAGCCCTAGTAAGGGACGAAATTGTTCAAAGGGATGACGTTCCACCGGCTATCTATGACCTTCCTCCTCACCTGTTGGATGCTCTGGCTTCGCAGCTGCCACCGTTGGCTTTACAGAATTTACAGTCAGGAATGTACGTCGCCCCACCCCGATTAAGTTGTTATCTTTTATTACCATTTAGCTTGGTTGAAGGCTGTCAAATCCATGTGGTTGGTAGTGTGCACGAGTATTGCATTGAAAATTGA ATGGCGGAAGCTCCTTCGCTGCTCTTTCTGTGCACAGCCCTAGTAAGGGACGAAATTGTTCAAAGGGATGACGTTCCACCGGCTATCTATGACCTTCCTCCTCACCTGTTGGATGCTCTGGCTTCGCAGCTGCCACCGTTGGCTTTACAGAATTTACAGTCAGGAATGTACGTCGCCCCACCCCGATTAAGTTGTTATCTTTTATTACCATTTAGCTTGGTTGAAGGCTGTCAAATCCATGTGGTTGGTAGTGTGCACGAGTATTGCATTGAAAATTGA MAEAPSLLFLCTALVRDEIVQRDDVPPAIYDLPPHLLDALASQLPPLALQNLQSGMYVAPPRLSCYLLLPFSLVEGCQIHVVGSVHEYCIEN Homology
BLAST of Tan0005238 vs. NCBI nr
Match: XP_022954282.1 (uncharacterized protein LOC111456584 isoform X1 [Cucurbita moschata] >XP_022954283.1 uncharacterized protein LOC111456584 isoform X1 [Cucurbita moschata]) HSP 1 Score: 107.8 bits (268), Expect = 4.9e-20 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Tan0005238 vs. NCBI nr
Match: KAG7014586.1 (T-complex-associated testis-expressed protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.8 bits (268), Expect = 4.9e-20 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Tan0005238 vs. NCBI nr
Match: KAG6576068.1 (CLIP-associated protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.8 bits (268), Expect = 4.9e-20 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Tan0005238 vs. NCBI nr
Match: XP_023549040.1 (uncharacterized protein LOC111807525 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549041.1 uncharacterized protein LOC111807525 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-19 Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of Tan0005238 vs. NCBI nr
Match: KAA0050632.1 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa] >TYK07801.1 NACHT, LRR and PYD domains-containing protein 5 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-18 Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Tan0005238 vs. ExPASy TrEMBL
Match: A0A6J1GQL7 (uncharacterized protein LOC111456584 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456584 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Tan0005238 vs. ExPASy TrEMBL
Match: A0A0A0K6N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G330380 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Tan0005238 vs. ExPASy TrEMBL
Match: A0A5D3C7E3 (NACHT, LRR and PYD domains-containing protein 5 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00940 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19 Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Tan0005238 vs. ExPASy TrEMBL
Match: A0A6J1JTJ2 (uncharacterized protein LOC111488203 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488203 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18 Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of Tan0005238 vs. ExPASy TrEMBL
Match: A0A1S3CFT7 (uncharacterized protein LOC103500467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500467 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16 Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Tan0005238 vs. TAIR 10
Match: AT2G20210.1 (RNI-like superfamily protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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