Tan0005191 (gene) Snake gourd v1

Overview


Name	Tan0005191
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	LG07: 72295098 .. 72297030 (-)
RNA-Seq Expression	Tan0005191
Synteny	Tan0005191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGCGAAAGAAATTTTGAGGAATAATAGAATTGAAGATATTAGTTGGCTTTGTTCACTATCTGAATCGGAGCTTGTAAGTTCATCTGAATTTTTTTTGTATTAGTGACTGACTCATTGTATGGTGCAAGTCGTTTTTACAAATACCGAGCATTCTTCTTGTCGTTGTTGAATAGCTACGTAATTCCTGGTCATTCTATATTTTTTTTTTCTATCAACTTTATTGGAAAGGATTAATATCTTACTTGATTTTGATAACAATGAACGACCATCTGTTTTTGGATTTTCATGTTCTGTCAAACTCAAAAGTACATTCAATGCGAGCTTGTGTGGATCATATGCTTATTGACTCTGTATATGATGTATGTGGCAGGACATGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGTAATTGGCCATGAAGATCTAGCCGAGAAATTTGATCTGAAGACACTACGTGCTATAGGTATTTCTGCTTTCTGTGTTGTATTTCTTGTATTTGTATTACCTCTAGTTATCATATCATTGTCTAGAATGCCGGTGTGAACTCTCTCTAGCATGCGTTAAGTGTACAGCCACCATGTTGCTTTATTTGTGCTATCTACTGTATTAGTTGCTGAACAAATTTTGCATTTATGGCCCTATCTATGTAGGGTTTGTTTTGATGGAACATCTTAAAGGACAACTTAGGGCATCGGGTGTTCCAGATCAGTCTCAATCTGCTGCCTTAAATGGGTGCAACATATTAGACAGCAGTCTTGAGAAAATTTTGTCACTTGATGAGATAATGGCAAGTATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTTGGTACAAACTACAAGTAGCTATTGTTGTATTGTGAAAGATTACATTATTGGCAAGCACAGCAAAACTTCACATTATTCATTGCTTTGTTATTTTGTAAAGTTCACATATATTTTTTTTTTCTTACAAAAAAAGCTCTTTTTGGCAGCAACTATGTTGTGGTTTTCATATAAACTTCCTTGGTAGCAATGCATTAGATATGTCGTAAATCAATAAGATCATGTCTGTTCCTAACATTTTTGCCTTGGACTCTAGAATGGATGTTCATGTCATTAATATTTCATTCTCTAATTAGAGCTGGTTTCTTTCGATTCTAATTTTCCGAATTACAGCACTCGAATCTTGATAGGCATACATTTTTTCTTTTTTGCTGCCTTCCTCGCCTGATTGGATTCAGGCAGTTTTTTTTCCCTTCAATATTTATTGATTTACTATTTCAAATGCTACCACTCTGAATTCTTTGATCTCATACTGTTGTTGTTGTTTTTTTTAATTTGAGTAAAAAAAGCGAAAACACAAGCTTTTTGGCAGCTACATTTACCTTTTGGTTTTCATAAAGCCATTCATATAAACTTTCATGGTAGCACTGATGCATTAGATATGTAGTAAATCAATAAGATGATGCCTGATCCTAATATTTTTGTTTTGAACTCCATGTTATTATACTTTCATTCTCTAATTAGAGCTGGCTTCTTTCCATTCTGACTTTCTGAATTACGGCACTAGAGAGGAATCTTGACAGAACTTACTTTCTCATGGCCTGCCATCTTTTTCTTTTTTGCTACCTTCCTTGGGTTACTGGGTTCATTCCATTTGTTTTTCTTTAATTTTTCTAGATTTACTAATTCAAATGCTGTCACTCAAATTCTTTTCTCTAACGCTGATTTTTTAAAGATGTATATGCTTTCAGTACTTCATTGTAATGTTAAATAGCATTCTGTTGTTTCTAAATTAATTGTGTGTTGTGGTTTAAGTTGGCGTTGTTTTTCCTAATTTGTAAAGCCAACTTATGAACTCATATATCTCTCTCCTTTTTCTAGGGCGCGGCTGAAGGTTGATCCTAGACCAAAGAACGACAAGTTGTGA

mRNA sequence

ATGGAAGAGGCGAAAGAAATTTTGAGGAATAATAGAATTGAAGATATTAGTTGGCTTTGTTCACTATCTGAATCGGAGCTTGACATGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGTAATTGGCCATGAAGATCTAGCCGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTGTTTTGATGGAACATCTTAAAGGACAACTTAGGGCATCGGGTGTTCCAGATCAGTCTCAATCTGCTGCCTTAAATGGGTGCAACATATTAGACAGCAGTCTTGAGAAAATTTTGTCACTTGATGAGATAATGGCAAGTATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGGCGCGGCTGAAGGTTGATCCTAGACCAAAGAACGACAAGTTGTGA

Coding sequence (CDS)

ATGGAAGAGGCGAAAGAAATTTTGAGGAATAATAGAATTGAAGATATTAGTTGGCTTTGTTCACTATCTGAATCGGAGCTTGACATGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGTAATTGGCCATGAAGATCTAGCCGAGAAATTTGATCTGAAGACACTACGTGCTATAGGGTTTGTTTTGATGGAACATCTTAAAGGACAACTTAGGGCATCGGGTGTTCCAGATCAGTCTCAATCTGCTGCCTTAAATGGGTGCAACATATTAGACAGCAGTCTTGAGAAAATTTTGTCACTTGATGAGATAATGGCAAGTATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGGCGCGGCTGAAGGTTGATCCTAGACCAAAGAACGACAAGTTGTGA

Protein sequence

MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRAIGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGKRARLKVDPRPKNDKL

Homology

[Close]

BLAST of Tan0005191 vs. NCBI nr
Match: XP_022156102.1 (uncharacterized protein LOC111023068 [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 6.2e-56
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIED+SWLCSLSESELDMLISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGF LMEHLKGQLRAS VPDQSQSAALNGCN+LD SLEKILS+DEIMAS+CS+RRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RARLKVDPRPKNDKL 136
           R R K D R KN+KL
Sbjct: 121 RPRQKADSRQKNEKL 135

[Close]

BLAST of Tan0005191 vs. NCBI nr
Match: XP_038902583.1 (uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902585.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902586.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902588.1 uncharacterized protein LOC120089238 [Benincasa hispida])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEI ++NRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLA+KFDLKT+RA
Sbjct: 1   MEEAKEISKSNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAKKFDLKTIRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGFVLMEHLKG+L+AS VPD SQSAALNGCN+LDS+LEKILS+DEIMASICS+RRKKPGK
Sbjct: 61  IGFVLMEHLKGELKASDVPDLSQSAALNGCNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RARLKVDPRPK-NDKL 136
           R R KVD R K NDKL
Sbjct: 121 RPREKVDSRQKTNDKL 136

[Close]

BLAST of Tan0005191 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54
Identity = 115/131 (87.79%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIEDISWLCSLSESELD LISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGF+LMEHLKGQL  SGVPDQSQ +ALNG N+LDSSLEKILS+D+IMASICSERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RARLKVDPRPK 132
           R+R K D RPK
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Tan0005191 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.5 bits (563), Expect = 4.5e-54
Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIEDISWLCSLSESELD LISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           +GF+LMEHLKGQL  SGVPDQSQ +ALNG N+LDSSLEK+LS+D+IMASICSERRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERRKKPGK 120

Query: 121 RARLKVDPRPK 132
           R+R K D RPK
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Tan0005191 vs. NCBI nr
Match: XP_022931147.1 (uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 uncharacterized protein LOC111437414 [Cucurbita moschata])

HSP 1 Score: 220.3 bits (560), Expect = 1.0e-53
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIEDISWLCSLSESELD LISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGF+LMEHLKGQL  SGVPDQSQ +ALNG N+LDSSLEK+LS+D+IMASIC ERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RARLKVDPRPK 132
           R+R K D RPK
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Tan0005191 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIED+SWLCSLSESELDMLISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGF LMEHLKGQLRAS VPDQSQSAALNGCN+LD SLEKILS+DEIMAS+CS+RRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RARLKVDPRPKNDKL 136
           R R K D R KN+KL
Sbjct: 121 RPRQKADSRQKNEKL 135

[Close]

BLAST of Tan0005191 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.8e-54
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIEDISWLCSLSESELD LISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGF+LMEHLKGQL  SGVPDQSQ +ALNG N+LDSSLEK+LS+D+IMASIC ERRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RARLKVDPRPK 132
           R+R K D RPK
Sbjct: 121 RSRPKADSRPK 131

[Close]

BLAST of Tan0005191 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEIL++NRIEDISWLCSLSESELD LISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           +GF+LMEHLKGQL  S VPDQSQ +ALNG N+LDSSLEKILS+D+IMASICSERRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RARLKVDPRPK 132
           R+R K D RP+
Sbjct: 121 RSRPKADSRPR 131

[Close]

BLAST of Tan0005191 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EIL+NNR+EDISWLCSLSESELD+LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGFVLMEHLKG+LR S V D SQSA LN CN+LDS++EKILS+DEIMASICS+RRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RAR 124
           R R
Sbjct: 121 RPR 123

[Close]

BLAST of Tan0005191 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 103/123 (83.74%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EIL+NNR+EDISWLCSLSESELD+LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFVLMEHLKGQLRASGVPDQSQSAALNGCNILDSSLEKILSLDEIMASICSERRKKPGK 120
           IGFVLMEHLKG+LR S V D SQSA LN CN+LDS++EKILS+DEIMASICS+RRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RAR 124
           R +
Sbjct: 180 RGK 182

[Close]

BLAST of Tan0005191 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27
Identity = 59/126 (46.83%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +IL+NNR +D++W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGQLR--ASGVPD-QSQSAALNGCNILDSSLEKILSLDEIMASICSERRKK 120
           +G VLMEH + +++   S  P    Q   L+ CN+L + ++  + ++EI+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRAR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]

BLAST of Tan0005191 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27
Identity = 59/126 (46.83%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +IL+NNR +D++W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGQLR--ASGVPD-QSQSAALNGCNILDSSLEKILSLDEIMASICSERRKK 120
           +G VLMEH + +++   S  P    Q   L+ CN+L + ++  + ++EI+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRAR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]

BLAST of Tan0005191 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27
Identity = 59/126 (46.83%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +IL+NNR +D++W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGQLR--ASGVPD-QSQSAALNGCNILDSSLEKILSLDEIMASICSERRKK 120
           +G VLMEH + +++   S  P    Q   L+ CN+L + ++  + ++EI+  IC  + KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRAR 124
             ++ R
Sbjct: 121 KARKRR 126

[Close]

BLAST of Tan0005191 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25
Identity = 62/128 (48.44%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +IL+NNR +D++W CSLSESELD+LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGQLR--ASGVPDQSQS-AALNGCNILDSSLEKILSLDEIMASICSER-R 120
           ++G VLME+++ ++    S  P   Q  + L+ CN+L + ++  + ++EI+  IC+++ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRAR 124
           KK  KR+R
Sbjct: 121 KKTRKRSR 128

[Close]

BLAST of Tan0005191 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25
Identity = 62/128 (48.44%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MEEAKEILRNNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +IL+NNR +D++W CSLSESELD+LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGQLR--ASGVPDQSQS-AALNGCNILDSSLEKILSLDEIMASICSER-R 120
           ++G VLME+++ ++    S  P   Q  + L+ CN+L + ++  + ++EI+  IC+++ +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRAR 124
           KK  KR+R
Sbjct: 121 KKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of Tan0005191 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005191 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156102.1	6.2e-56	86.67	uncharacterized protein LOC111023068 [Momordica charantia]	[more]
XP_038902583.1	1.2e-54	86.76	uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 unchara...	[more]
XP_023533769.1	2.0e-54	87.79	uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]	[more]
KAG6606306.1	4.5e-54	86.26	hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931147.1	1.0e-53	86.26	uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 unchar...	[more]

BLAST of Tan0005191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR49	3.0e-56	86.67	uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1ESQ9	4.8e-54	86.26	uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A6J1K2S6	1.8e-53	85.50	uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189...	[more]
A0A1S3BQH9	1.6e-49	84.55	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A5A7UQA1	2.7e-49	83.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Tan0005191 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	2.2e-27	46.83	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	2.2e-27	46.83	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	2.2e-27	46.83	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	2.1e-25	48.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	2.1e-25	48.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..135
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005191.1	Tan0005191.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity