Tan0005178 (gene) Snake gourd v1

Overview


Name	Tan0005178
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	phosphopantothenoylcysteine decarboxylase-like
Location	LG09: 73155306 .. 73156506 (-)
RNA-Seq Expression	Tan0005178
Synteny	Tan0005178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTCAATAACACTCGAACAAGACCAAACATTCTTCTTGCTGCTTGTGGAAATGTTGCTGCAGTAAAGTTTAAAAGCCTATGCCACGGTTTTTCTGAATGGGCAGAAGTTCGAGCCGTTGCCACAAGGGCAGCATTGTTCTTCATTGACCGAGCATCCCTCCCAAAGAATGTATTTCTTTACATCGACGAGGACGACTGGGCAAATTGGGGCAAAATTGGTGACAATGTGCTTCACATTCAGCTTTGCAAATGGGCTGATATTATGGTTATTGCTCCACTCTCAGCAAACACACTTGGAAAGGTTCTATTACATGTTTGATGATAGTTTATATATAATTTCTTCCTTTTAGGTTCATACTTCAAACTAGACATATAAATGAAGTAACAACTAAACTCATGTAGTTAACAGGTAGGAAATCAGTATCACTTGAGGCAACAAAATCTTTGTCAATCAACCCTTTAGTTTTATGCAACTTTTAAGGGATGCCCCATAGCTCTATGTTACATTTTAACTGAAACATTTCTGTTTGTTGTCAAGAATCTTGGACCAGCTTTAATTTTGATGGACTGAACTTCTTAGGTTGAGGAAACTAAGATCTCGATCTCAGAGGGTGATATGGTGCATTTGGCTTATCTTTCTAATCTACAATATACAGCACTACATTAGATGAGTTGGGACTAAAAGTAGAAATCTTGGTATCACTTAAGTTCTTCGCCAAATATTTCAGTTTCATCTACTTTAGAGATAGCTGGTGTGAACACTGAATATATAGTTGATTAGTTTTATCTGGCATTATAGCTTTGAAGGATCGTTTGGTGACGTTTCTATTTCTTTTTTTGTTATCACCATTCCCATCAGAATTCATTTCGTGGTTTGTCTATTTTTTTGTTAGATTGCGGGAGGATTGTGTGATAATCTATTAACTTGCATTGTACGGGCATGGGACTACAGCAAGCCTTTCTTTGTTGCACCTGCCATGAGTGCTCTAATGTGGAATAATTCCTTCACTGAAAGACATCTTGTGTCTGTTGATGACCTTGGAATTACTCTCATACGACCAAAGTTAATCAGTGAGGAACATTGCAATGATGACATGGCTGAACCCAACCTCATTTCCTCAACTGTGAGGCTATTCTTAGAATCACGATGTAATGAGAAAGAAACAGCCAGATCATCAGTAACATGTATCACATAA

mRNA sequence

ATGCAAGTCAATAACACTCGAACAAGACCAAACATTCTTCTTGCTGCTTGTGGAAATGTTGCTGCAGTAAAGTTTAAAAGCCTATGCCACGGTTTTTCTGAATGGGCAGAAGTTCGAGCCGTTGCCACAAGGGCAGCATTGTTCTTCATTGACCGAGCATCCCTCCCAAAGAATGTATTTCTTTACATCGACGAGGACGACTGGGCAAATTGGGGCAAAATTGGTGACAATGTGCTTCACATTCAGCTTTGCAAATGGGCTGATATTATGGTTATTGCTCCACTCTCAGCAAACACACTTGGAAAGATTGCGGGAGGATTGTGTGATAATCTATTAACTTGCATTGTACGGGCATGGGACTACAGCAAGCCTTTCTTTGTTGCACCTGCCATGAGTGCTCTAATGTGGAATAATTCCTTCACTGAAAGACATCTTGTGTCTGTTGATGACCTTGGAATTACTCTCATACGACCAAAGTTAATCAGTGAGGAACATTGCAATGATGACATGGCTGAACCCAACCTCATTTCCTCAACTGTGAGGCTATTCTTAGAATCACGATGTAATGAGAAAGAAACAGCCAGATCATCAGTAACATGTATCACATAA

Coding sequence (CDS)

ATGCAAGTCAATAACACTCGAACAAGACCAAACATTCTTCTTGCTGCTTGTGGAAATGTTGCTGCAGTAAAGTTTAAAAGCCTATGCCACGGTTTTTCTGAATGGGCAGAAGTTCGAGCCGTTGCCACAAGGGCAGCATTGTTCTTCATTGACCGAGCATCCCTCCCAAAGAATGTATTTCTTTACATCGACGAGGACGACTGGGCAAATTGGGGCAAAATTGGTGACAATGTGCTTCACATTCAGCTTTGCAAATGGGCTGATATTATGGTTATTGCTCCACTCTCAGCAAACACACTTGGAAAGATTGCGGGAGGATTGTGTGATAATCTATTAACTTGCATTGTACGGGCATGGGACTACAGCAAGCCTTTCTTTGTTGCACCTGCCATGAGTGCTCTAATGTGGAATAATTCCTTCACTGAAAGACATCTTGTGTCTGTTGATGACCTTGGAATTACTCTCATACGACCAAAGTTAATCAGTGAGGAACATTGCAATGATGACATGGCTGAACCCAACCTCATTTCCTCAACTGTGAGGCTATTCTTAGAATCACGATGTAATGAGAAAGAAACAGCCAGATCATCAGTAACATGTATCACATAA

Protein sequence

MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVFLYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTVRLFLESRCNEKETARSSVTCIT

Homology

[Close]

BLAST of Tan0005178 vs. ExPASy Swiss-Prot
Match: Q9SWE5 (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3A PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.9e-73
Identity = 128/194 (65.98%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           M+VN T  +P +LLAA G+VAA+KF +LCH F+EWAEVRAV T+++L F+D+ SLP+ V 
Sbjct: 11  MEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVT 70

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DED+W++W KIGD VLHI+L +WAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWD
Sbjct: 71  LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWD 130

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRP---KLISEEHCNDDMAEPNLIS 180
           Y+KP FVAPAM+ LMWNN FTERHL+S+D+LGITLI P   +L   ++ N  MAEP+LI 
Sbjct: 131 YTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIY 190

Query: 181 STVRLFLESRCNEK 192
           STVRLF ES+ +++
Sbjct: 191 STVRLFWESQAHQQ 204

[Close]

BLAST of Tan0005178 vs. ExPASy Swiss-Prot
Match: P94063 (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3B PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72
Identity = 130/199 (65.33%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           M+V+    +P ILLAA G+VA++KF +LCH FSEWAEV+AVA++++L F+D+ SLP+NV 
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DED+W++W KIGD VLHI+L +WAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRP---KLISEEHCNDDMAEPNLIS 180
           YSKP FVAPAM+ LMWNN FTERHLV +D+LGITLI P   KL   ++ N  MAEP+LI 
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 181 STVRLFLESRCNEKETARS 197
           STVRLF ES+  ++    S
Sbjct: 183 STVRLFWESQARKQRDGTS 201

[Close]

BLAST of Tan0005178 vs. ExPASy Swiss-Prot
Match: Q69K55 (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica OX=39947 GN=HAL3 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.9e-68
Identity = 122/178 (68.54%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 8   TRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVFLYIDEDD 67
           ++P +LLAA G+VAA+KF+SLC  FSEWAEVRAVAT+A+L FIDR SLP N+ LY D+D+
Sbjct: 19  SKPRVLLAASGSVAAIKFESLCRSFSEWAEVRAVATKASLHFIDRTSLPSNIILYTDDDE 78

Query: 68  WANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFV 127
           W+ W KIGD VLHI+L KWADIMVIAPLSANTL KIAGGLCDNLLTCIVRAWDYSKP FV
Sbjct: 79  WSTWKKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFV 138

Query: 128 APAMSALMWNNSFTERHLVSVDDLGITLIRP---KLISEEHCNDDMAEPNLISSTVRL 183
           APAM+  MWNN FT RHL +++ LGI+L+ P   +L   ++ N  MAEP++I STVRL
Sbjct: 139 APAMNTFMWNNPFTSRHLETINLLGISLVPPITKRLACGDYGNGAMAEPSVIDSTVRL 196

[Close]

BLAST of Tan0005178 vs. ExPASy Swiss-Prot
Match: Q8BZB2 (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus OX=10090 GN=Ppcdc PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 71/178 (39.89%), Postives = 98/178 (55.06%), Query Frame = 0


Query: 12  ILLAACGNVAAVKFKSLCHGFSE--WAEVRAVATRAALFFIDRASLPKNVFLYIDEDDWA 71
           +L+   G+VAA+K   L     +    EV  V T  A  F     +P  V LY D D+W 
Sbjct: 20  VLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VTLYSDADEWE 79

Query: 72  NWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAP 131
            W +  D VLHI L +WAD+M++APL ANTLGK+A G+CDNLLTC++RAWD +KP    P
Sbjct: 80  MWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWDLNKPLLFCP 139

Query: 132 AMSALMWNNSFTERHLVSVDDLG---ITLIRPKLISEEHCNDDMAEPNLISSTVRLFL 185
           AM+  MW +  T + +  +   G   I  +  KL+  +     MAE   I + V+  L
Sbjct: 140 AMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQGLGAMAEVETIVAKVQAVL 195

[Close]

BLAST of Tan0005178 vs. ExPASy Swiss-Prot
Match: Q96CD2 (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens OX=9606 GN=PPCDC PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 70/176 (39.77%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 11  NILLAACGNVAAVKFKSLCHGFSE--WAEVRAVATRAALFFIDRASLPKNVFLYIDEDDW 70
           ++L+   G+VAA+K   L     +    EV  V T  A  F     +P  V LY D D+W
Sbjct: 19  HVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSDADEW 78

Query: 71  ANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVA 130
             W    D VLHI L +WAD++++APL ANTLGK+A G+CDNLLTC++RAWD SKP    
Sbjct: 79  EIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFC 138

Query: 131 PAMSALMWNNSFTERHLVSVDDLG---ITLIRPKLISEEHCNDDMAEPNLISSTVR 182
           PAM+  MW +  T + +  +   G   I  +  KL+  +     MAE   I   V+
Sbjct: 139 PAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVK 192

[Close]

BLAST of Tan0005178 vs. NCBI nr
Match: XP_023531682.1 (phosphopantothenoylcysteine decarboxylase-like [Cucurbita pepo subsp. pepo] >KAG6587425.1 Phosphopantothenoylcysteine decarboxylase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021409.1 Phosphopantothenoylcysteine decarboxylase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-95
Identity = 176/202 (87.13%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNNT  RP+ILLAACG+V AVKFKSLCHGFSEWAEVRAVATRAAL FID ASLPKNV+
Sbjct: 1   MQVNNTGKRPHILLAACGSVGAVKFKSLCHGFSEWAEVRAVATRAALLFIDPASLPKNVY 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DEDDW NWG+IGD+VLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYGDEDDWINWGRIGDDVLHIQLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGI LIRPKL S E CN  MAEP+LISSTV
Sbjct: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGIALIRPKLSSGEQCNCAMAEPSLISSTV 180

Query: 181 RLFLESRCNEKETARSSVTCIT 203
           RLFLESR  +KETA ++VTCIT
Sbjct: 181 RLFLESRREQKETA-TAVTCIT 201

[Close]

BLAST of Tan0005178 vs. NCBI nr
Match: XP_022965642.1 (phosphopantothenoylcysteine decarboxylase-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 175/202 (86.63%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNNT  RP+ILLAACG+V AVKFKSLCHGFSEWAEVRAVATRAAL FID ASLPKNV+
Sbjct: 1   MQVNNTGKRPHILLAACGSVGAVKFKSLCHGFSEWAEVRAVATRAALLFIDPASLPKNVY 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DEDDW NWG+IGD+VLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYGDEDDWINWGRIGDDVLHIQLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKPFFVAPAMSAL WNNSFTERHLVSVDDLGI LIRPKL S E CN  MAEP+LISSTV
Sbjct: 121 YSKPFFVAPAMSALTWNNSFTERHLVSVDDLGIALIRPKLSSGEQCNCAMAEPSLISSTV 180

Query: 181 RLFLESRCNEKETARSSVTCIT 203
           RLFLESR  +KETA ++VTCIT
Sbjct: 181 RLFLESRREQKETA-TAVTCIT 201

[Close]

BLAST of Tan0005178 vs. NCBI nr
Match: XP_022933484.1 (phosphopantothenoylcysteine decarboxylase-like [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 5.1e-94
Identity = 175/202 (86.63%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNNT  RP+ILLAACG+V AVKFKSLCHGFSEWAEVRAVATRAAL FID ASL KNV+
Sbjct: 1   MQVNNTGKRPHILLAACGSVGAVKFKSLCHGFSEWAEVRAVATRAALLFIDPASLTKNVY 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DEDDW NWG+IGD+VLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYGDEDDWINWGRIGDDVLHIQLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGI LIRPKL S E CN  MAEP+LISSTV
Sbjct: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGIALIRPKLSSGEQCNCAMAEPSLISSTV 180

Query: 181 RLFLESRCNEKETARSSVTCIT 203
           RLFLESR  +KETA ++VTCIT
Sbjct: 181 RLFLESRREQKETA-TAVTCIT 201

[Close]

BLAST of Tan0005178 vs. NCBI nr
Match: XP_038880127.1 (probable phosphopantothenoylcysteine decarboxylase [Benincasa hispida])

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86
Identity = 156/194 (80.41%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNN + +P+ILLAACG VAAVKF+SLCHGF EWAEVRAVATRAALFFIDRASLPKN+F
Sbjct: 1   MQVNNPQRKPHILLAACGCVAAVKFRSLCHGFYEWAEVRAVATRAALFFIDRASLPKNIF 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY+D+DDW NW KIGDNVLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYVDDDDWLNWRKIGDNVLHIQLCSWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKP FVAPAM+ LMW NSFTERHLVSVDDLGITLIRP+    E CN  MAEP+ IS+TV
Sbjct: 121 YSKPLFVAPAMNTLMWKNSFTERHLVSVDDLGITLIRPETSGGEQCNGVMAEPSHISATV 180

Query: 181 RLFLESRCNEKETA 195
            L+LE +  ++ET+
Sbjct: 181 ILYLELQRKKQETS 194

[Close]

BLAST of Tan0005178 vs. NCBI nr
Match: XP_022134699.1 (probable phosphopantothenoylcysteine decarboxylase [Momordica charantia])

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 162/195 (83.08%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNN + RP+ILLAACG+VAA+KF+ L H FSEWAEVRAVATRAALFF+DRA LPKNV 
Sbjct: 1   MQVNNIQRRPHILLAACGSVAAIKFRILYHCFSEWAEVRAVATRAALFFLDRADLPKNVP 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LYIDEDD A+WGKIGD+VLHIQLC WADIMVIAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYIDEDDLASWGKIGDDVLHIQLCSWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKP +VAPAM+ALMWNN+FTERHLVSVDDLGITLIRP  IS E CN  MAEP LISSTV
Sbjct: 121 YSKPLYVAPAMNALMWNNTFTERHLVSVDDLGITLIRPGSISGERCNGAMAEPTLISSTV 180

Query: 181 RLFLESRCNEKETAR 196
           RLFLESR   K TAR
Sbjct: 181 RLFLESR--RKGTAR 193

[Close]

BLAST of Tan0005178 vs. ExPASy TrEMBL
Match: A0A6J1HKV9 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465476 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.4e-94
Identity = 175/202 (86.63%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNNT  RP+ILLAACG+V AVKFKSLCHGFSEWAEVRAVATRAAL FID ASLPKNV+
Sbjct: 1   MQVNNTGKRPHILLAACGSVGAVKFKSLCHGFSEWAEVRAVATRAALLFIDPASLPKNVY 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DEDDW NWG+IGD+VLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYGDEDDWINWGRIGDDVLHIQLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKPFFVAPAMSAL WNNSFTERHLVSVDDLGI LIRPKL S E CN  MAEP+LISSTV
Sbjct: 121 YSKPFFVAPAMSALTWNNSFTERHLVSVDDLGIALIRPKLSSGEQCNCAMAEPSLISSTV 180

Query: 181 RLFLESRCNEKETARSSVTCIT 203
           RLFLESR  +KETA ++VTCIT
Sbjct: 181 RLFLESRREQKETA-TAVTCIT 201

[Close]

BLAST of Tan0005178 vs. ExPASy TrEMBL
Match: A0A6J1EZW2 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111440889 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94
Identity = 175/202 (86.63%), Postives = 184/202 (91.09%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNNT  RP+ILLAACG+V AVKFKSLCHGFSEWAEVRAVATRAAL FID ASL KNV+
Sbjct: 1   MQVNNTGKRPHILLAACGSVGAVKFKSLCHGFSEWAEVRAVATRAALLFIDPASLTKNVY 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DEDDW NWG+IGD+VLHIQLC WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYGDEDDWINWGRIGDDVLHIQLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGI LIRPKL S E CN  MAEP+LISSTV
Sbjct: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGIALIRPKLSSGEQCNCAMAEPSLISSTV 180

Query: 181 RLFLESRCNEKETARSSVTCIT 203
           RLFLESR  +KETA ++VTCIT
Sbjct: 181 RLFLESRREQKETA-TAVTCIT 201

[Close]

BLAST of Tan0005178 vs. ExPASy TrEMBL
Match: A0A6J1BZH8 (probable phosphopantothenoylcysteine decarboxylase OS=Momordica charantia OX=3673 GN=LOC111006906 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.4e-86
Identity = 162/195 (83.08%), Postives = 173/195 (88.72%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNN + RP+ILLAACG+VAA+KF+ L H FSEWAEVRAVATRAALFF+DRA LPKNV 
Sbjct: 1   MQVNNIQRRPHILLAACGSVAAIKFRILYHCFSEWAEVRAVATRAALFFLDRADLPKNVP 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LYIDEDD A+WGKIGD+VLHIQLC WADIMVIAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYIDEDDLASWGKIGDDVLHIQLCSWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKP +VAPAM+ALMWNN+FTERHLVSVDDLGITLIRP  IS E CN  MAEP LISSTV
Sbjct: 121 YSKPLYVAPAMNALMWNNTFTERHLVSVDDLGITLIRPGSISGERCNGAMAEPTLISSTV 180

Query: 181 RLFLESRCNEKETAR 196
           RLFLESR   K TAR
Sbjct: 181 RLFLESR--RKGTAR 193

[Close]

BLAST of Tan0005178 vs. ExPASy TrEMBL
Match: A0A6J1JAP4 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111485088 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.8e-82
Identity = 146/196 (74.49%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNN R RP+ILLAACG+VAAVKF+ +C GFSEWAEVRAV T+AALFFIDRAS PKN F
Sbjct: 1   MQVNNPRRRPHILLAACGSVAAVKFRCICQGFSEWAEVRAVVTKAALFFIDRASFPKNFF 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           L ID+ DW +W K+GD +LHIQLC WADIM+IAPLSANTLGKIAGGLCDNLLTC+VRAWD
Sbjct: 61  LLIDDQDWYSWRKLGDTMLHIQLCNWADIMIIAPLSANTLGKIAGGLCDNLLTCVVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKP FVAPAM+ALMW N FTE+HL SVDD+G+TLIRP+L   EHCN  MAEP  IS+TV
Sbjct: 121 YSKPLFVAPAMNALMWKNPFTEKHLSSVDDIGVTLIRPRLRDGEHCNGAMAEPGHISATV 180

Query: 181 RLFLESRCNEKETARS 197
            LFLE +  ++E AR+
Sbjct: 181 LLFLELQRKKQEAARA 196

[Close]

BLAST of Tan0005178 vs. ExPASy TrEMBL
Match: A0A6J1E1V3 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=LOC111430070 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.1e-81
Identity = 145/196 (73.98%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           MQVNN R RP+ILLAACG VAAVKF+ +C GFSEWAEVRAV T+ ALFFIDRAS PKN F
Sbjct: 1   MQVNNPRRRPHILLAACGCVAAVKFRCICQGFSEWAEVRAVVTKTALFFIDRASFPKNFF 60

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           L ID+ DW +W K+GD +LHIQLC WADIM+IAPLSANTLGKIAGGLCDNLLTC+VRAWD
Sbjct: 61  LLIDDQDWYSWRKLGDTMLHIQLCNWADIMIIAPLSANTLGKIAGGLCDNLLTCVVRAWD 120

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRPKLISEEHCNDDMAEPNLISSTV 180
           YSKP FVAPAM+ALMWNN FTE+HL SVDD+G+TLIRP+L   E+CN  MAEP  IS+TV
Sbjct: 121 YSKPIFVAPAMNALMWNNPFTEKHLSSVDDIGVTLIRPRLRDGEYCNGAMAEPGHISATV 180

Query: 181 RLFLESRCNEKETARS 197
            LFLE +  ++E AR+
Sbjct: 181 LLFLELQRKKQEAARA 196

[Close]

BLAST of Tan0005178 vs. TAIR 10
Match: AT3G18030.1 (HAL3-like protein A )

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-74
Identity = 128/194 (65.98%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           M+VN T  +P +LLAA G+VAA+KF +LCH F+EWAEVRAV T+++L F+D+ SLP+ V 
Sbjct: 11  MEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVT 70

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DED+W++W KIGD VLHI+L +WAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWD
Sbjct: 71  LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWD 130

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRP---KLISEEHCNDDMAEPNLIS 180
           Y+KP FVAPAM+ LMWNN FTERHL+S+D+LGITLI P   +L   ++ N  MAEP+LI 
Sbjct: 131 YTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIY 190

Query: 181 STVRLFLESRCNEK 192
           STVRLF ES+ +++
Sbjct: 191 STVRLFWESQAHQQ 204

[Close]

BLAST of Tan0005178 vs. TAIR 10
Match: AT1G48605.1 (Flavoprotein )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 130/199 (65.33%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MQVNNTRTRPNILLAACGNVAAVKFKSLCHGFSEWAEVRAVATRAALFFIDRASLPKNVF 60
           M+V+    +P ILLAA G+VA++KF +LCH FSEWAEV+AVA++++L F+D+ SLP+NV 
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 61  LYIDEDDWANWGKIGDNVLHIQLCKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DED+W++W KIGD VLHI+L +WAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 121 YSKPFFVAPAMSALMWNNSFTERHLVSVDDLGITLIRP---KLISEEHCNDDMAEPNLIS 180
           YSKP FVAPAM+ LMWNN FTERHLV +D+LGITLI P   KL   ++ N  MAEP+LI 
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 181 STVRLFLESRCNEKETARS 197
           STVRLF ES+  ++    S
Sbjct: 183 STVRLFWESQARKQRDGTS 201

The following BLAST results are available for this feature:

BLAST of Tan0005178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SWE5	3.9e-73	65.98	Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL...	[more]
P94063	1.5e-72	65.33	Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=37...	[more]
Q69K55	2.9e-68	68.54	Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica OX=399...	[more]
Q8BZB2	1.1e-30	39.89	Phosphopantothenoylcysteine decarboxylase OS=Mus musculus OX=10090 GN=Ppcdc PE=1...	[more]
Q96CD2	1.6e-29	39.77	Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens OX=9606 GN=PPCDC PE=1 ...	[more]

BLAST of Tan0005178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531682.1	6.0e-95	87.13	phosphopantothenoylcysteine decarboxylase-like [Cucurbita pepo subsp. pepo] >KAG...	[more]
XP_022965642.1	3.0e-94	86.63	phosphopantothenoylcysteine decarboxylase-like [Cucurbita maxima]	[more]
XP_022933484.1	5.1e-94	86.63	phosphopantothenoylcysteine decarboxylase-like [Cucurbita moschata]	[more]
XP_038880127.1	3.9e-86	80.41	probable phosphopantothenoylcysteine decarboxylase [Benincasa hispida]	[more]
XP_022134699.1	1.9e-85	83.08	probable phosphopantothenoylcysteine decarboxylase [Momordica charantia]	[more]

BLAST of Tan0005178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKV9	1.4e-94	86.63	phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EZW2	2.5e-94	86.63	phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1BZH8	9.4e-86	83.08	probable phosphopantothenoylcysteine decarboxylase OS=Momordica charantia OX=367...	[more]
A0A6J1JAP4	4.8e-82	74.49	phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1E1V3	4.1e-81	73.98	phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Tan0005178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18030.1	2.8e-74	65.98	HAL3-like protein A	[more]
AT1G48605.1	1.1e-73	65.33	Flavoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003382	Flavoprotein	PFAM	PF02441	Flavoprotein	coord: 11..180 e-value: 7.4E-38 score: 129.8
IPR036551	Flavin prenyltransferase-like	GENE3D	3.40.50.1950		coord: 9..196 e-value: 8.4E-61 score: 206.9
IPR036551	Flavin prenyltransferase-like	SUPERFAMILY	52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	coord: 10..182
None	No IPR available	PANTHER	PTHR14359:SF28	BNAA01G27100D PROTEIN	coord: 1..187
None	No IPR available	PANTHER	PTHR14359	HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005178.1	Tan0005178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015937	coenzyme A biosynthetic process
biological_process	GO:0070207	protein homotrimerization
biological_process	GO:0001558	regulation of cell growth
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0071513	phosphopantothenoylcysteine decarboxylase complex
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0004633	phosphopantothenoylcysteine decarboxylase activity
molecular_function	GO:0003824	catalytic activity