Tan0005146 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATCAAGTGAACGAGCAGGTACAAACAGTCCGCCTAGAGGTGGAAGAATTGAAAGAGCAAGTAGCAAAGATCTTGGAGCTTCTTACCGCAAGAAAAGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGACAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTTAAACCCACACATGGCTGAGGTAGCTTATCCAACCTCTTTTCCTGTGCAAGATCCCGGTCGAGCTCCGCACCAGGCCAGTCATGTGAGTGATCCAGTATTTGTTCCAACCGCAGAAAATCATAAAAATACTTCTGAAGATTTGTTAGGAAAAGGAAGGTTGGAGTTCCTTGAAGAAAGACTACGCGCGATTGAGGGTGCCGACGTCTATGGGGATATCGATGCTAGCAAACTATGTTTGATTTCAGATGTTGTTATTCCCCCAAAGTTCAAGACGCCAGAGTTTGAAAAGTATAATGGGACTACGTGTCCAAAGAGTCATCCGGTCATGTATTGTAGGAAAATGTCGGCTTATATCATGCGATGATAAGTTATTGATTCATCTGTTTTCAAGACACCGACCGGTGGCAGACGTCTCGTTGGTATATGCATTTGGATGGCTCCCAAGTACACAAGTGGAAAGATTTGGTTGATGCTTTCTTAAAACAGTATAAGTACAATATTGACATGGCACCCGATCGTTTAGATCTCCAGCGAATGGAAAAGAAGGCTACCGAGACTTTTAAGGAGTATGCACAAAGGTGGAGAGAATTGGCTGCTCAAGTACAACCTCCTTTAACTGACAAAGAATTGTCAGCCATGTTTATCAATACTCTGCGAGCACCATATTATGACAGGATGATCGGAAGTGCGTCCACAAATTTTTCTGACATCATAACAATCGGAGAAAGGATAGAGTATGGAGTTAAGAATGGGAGGATCGCAGACGCAACACCTGAGGCAAGTCTGAGAAAGGTAATGACTCCAAAGAAGAAGGAGGGAGAGGTCCATGAGGTAAGCTCAAGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATAACCGTAGTCCTCAACTTGGAGGACAAAGTCAACCGAATCAGTCAAATCAGCGTGTTACTAGCGGCAATTGGAAACAAATGTGTTTCGATCCCATTCCCATGACATACACTGAGCTTTTGCCTCAATTACTAAAAAACTATCAAGTTGCCATTGTGCCTTAAGAACTAGTACAACCCCGTATCCTAAATAGTACGACCCAAGCGCGCGGTGTGAATATCATGCAGGGGCAATTGGACATTCTACAGAGAATTGTTATCCATTAAAGGCTAAGGTACAAAACTTGGTTAAAGCACGATGGTTAAAATTCAAAAAAGCAGGGGAAGGGCCTGATGTTAATCAAAATCCTCTCCCAAACCATGAAAATCCTACTATGAATGTCATTGAAGCGTCTGAAGAATGCTATAAAGATAAAGTCCAAAATTTGAATACATCTATGAAGACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCGATAAGGTCTGAGCAGAGTAGCATAGATGATTTGGGCTTGCATAACGAGAATATATGCCTTTTTCATAAAGGAATGGTCGGACATTCCGTAGAAGATTGTGATGATTTTAAGCAGCATGTGCAAAAACTATTAGATTCAAAGTTATTGATTGTGAGCGATAACTACGGGAGATGA ATGGATGATCAAGTGAACGAGCAGGTACAAACAGTCCGCCTAGAGGTGGAAGAATTGAAAGAGCAAGTAGCAAAGATCTTGGAGCTTCTTACCGCAAGAAAAGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGACAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTTAAACCCACACATGGCTGAGGTAGCTTATCCAACCTCTTTTCCTGTGCAAGATCCCGGTCGAGTAAGCTCAAGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATAACCGTAGTCCTCAACTTGGAGGACAAAAATGCTATAAAGATAAAGTCCAAAATTTGAATACATCTATGAAGACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCGATAAGGTCTGAGCAGAGTAGCATAGATGATTTGGGCTTGCATAACGAGAATATATGCCTTTTTCATAAAGGAATGGTCGGACATTCCGTAGAAGATTGTGATGATTTTAAGCAGCATGTGCAAAAACTATTAGATTCAAAGTTATTGATTGTGAGCGATAACTACGGGAGATGA ATGGATGATCAAGTGAACGAGCAGGTACAAACAGTCCGCCTAGAGGTGGAAGAATTGAAAGAGCAAGTAGCAAAGATCTTGGAGCTTCTTACCGCAAGAAAAGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGACAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTTAAACCCACACATGGCTGAGGTAGCTTATCCAACCTCTTTTCCTGTGCAAGATCCCGGTCGAGTAAGCTCAAGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATAACCGTAGTCCTCAACTTGGAGGACAAAAATGCTATAAAGATAAAGTCCAAAATTTGAATACATCTATGAAGACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCGATAAGGTCTGAGCAGAGTAGCATAGATGATTTGGGCTTGCATAACGAGAATATATGCCTTTTTCATAAAGGAATGGTCGGACATTCCGTAGAAGATTGTGATGATTTTAAGCAGCATGTGCAAAAACTATTAGATTCAAAGTTATTGATTGTGAGCGATAACTACGGGAGATGA MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHMTSPTQRPASYNRSPQLGGQKCYKDKVQNLNTSMKTLFQILCDVGYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIVSDNYGR Homology
BLAST of Tan0005146 vs. NCBI nr
Match: KAA0046607.1 (Gag-pro-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 101.7 bits (252), Expect = 7.8e-18 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Tan0005146 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 3.9e-17 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Tan0005146 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11 Identity = 54/155 (34.84%), Postives = 74/155 (47.74%), Query Frame = 0
HSP 2 Score: 96.3 bits (238), Expect = 3.3e-16 Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of Tan0005146 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-11 Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 0
HSP 2 Score: 92.8 bits (229), Expect = 3.6e-15 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 0
BLAST of Tan0005146 vs. NCBI nr
Match: TYK15864.1 (Gag-pro-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 4.7e-15 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Tan0005146 vs. ExPASy TrEMBL
Match: A0A5A7TXF2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001530 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 3.8e-18 Identity = 55/107 (51.40%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Tan0005146 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.9e-17 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Tan0005146 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.3e-12 Identity = 54/155 (34.84%), Postives = 74/155 (47.74%), Query Frame = 0
HSP 2 Score: 96.3 bits (238), Expect = 1.6e-16 Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of Tan0005146 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.0e-12 Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 0
HSP 2 Score: 92.8 bits (229), Expect = 1.8e-15 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 0
BLAST of Tan0005146 vs. ExPASy TrEMBL
Match: A0A1S3BTL0 (uncharacterized protein LOC103493407 OS=Cucumis melo OX=3656 GN=LOC103493407 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.8e-15 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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