Tan0005046 (gene) Snake gourd v1

Overview


Name	Tan0005046
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG07: 9333250 .. 9338273 (+)
RNA-Seq Expression	Tan0005046
Synteny	Tan0005046

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCGATTTGAAAGCTTCGCTGTCGAGTTTGTCGCAGCACATCAATGATCTGTAGTGACACGAAATTCGGAAAGAAAATGCAGTAAAATGGGTCAAACTCATAAGGGAAGGGAGTGGGCGAATCCTTCAAACCAAAGTTGAAGATCAAACCACAAACCCCATTGAAGAAGAAGAACACAGACCCACCGAAATCACTAATCAGGCACATAATTATCTCCTTCATCCACAGACAAATCAATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCGGATGCTTGGCAATGCACTGCACGCTTTCCTGATCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAACTCTCTCGCCTCGCCCTCTCTCTATGGACCTTCCTCTGTGTCCCTCCCCCTGGTTCCTTCTACTATTACTACTACTCCTCTGATTCCGATTCTTCTTCCGAATGACTTCTCTCTCTGGTAATTTTCTCCCCTTTTCTTCAATTATTATGAGATGTGTCTTTCTAATTGTTCCATCGTCAATTTCTGCTTCTGGGTTTCCGTTCTTTTTCTTTATTATGCGCTTTTTGTCTTTAATTTCTTTCCCCTGTTTCAATTGATTTCGTAACTTGGAGATACCTACAACCTTATCGAAATTCAGTACATATATGTAACTGCCGCTCTGCGTATGCTTGCTCTGCAAACTTTGATTAGTGGTATCAGATTGGACATGTTCTAATAATAATCATGGTTCCCCGACCGTGGCTGACATTTTTCTAGCTTTTGTGTCAGAGTTCATCGAGTATGATAGAAACTGACAGCGAGCGTGTATTGAAGACAACACCATATATTACTTGAATTGAAAGATTGCTTACTAGTTCGTCGACTGAGTGATCTAAACCAACGCCATCTTTTGTGCCTTCTGAAGTAAAGTTTGTTTTCTTTGATTTCGTTGGTTGAGGTATCTGCTCCGTGTTACATCTCATGCATTTCAATTTGTTGTGTTCTTTGAGGTTTTCCACCTAACACTTAATTTTGTTGGATATGGTTTAGAGTCATTATACTACCGCTTGTCTTGGGATTCATCATAAATGTCACAGATATGCTTGATTTTTTGGGTGGAGATTTGCTCAATGATGTTGAACCTTTTGCTCTCTGGCTAATGAATTTCTTTTTTATCCTCCCAAGGGATTGAACAGTGGTCTCGTGGATGGCTTCATTAATATGTTTGTTATTTCTATAGGCAAAGTGGTTGGAGTGGAGGAGAGTAGGAATTTAGTCATAAGGAAAGCCTTCTTTTCATTTTTCCTCATTTCTTGTCCCACCATTGTAGAATGTATTCAGTTGACATTGCACCTAAAAGCTTAAGTTGTTAGATCAAGTCCAAAACATGCCGATTACTATGAATAGAGGAAGGAAATAACTCTCGAGGGATTTGAACTTATGGTCTCATTCGACAGTGCCACTTAACCCAAATGCTTTAGCTATTAGGCTAGGATAAAAATGTAATTGATTTTGTAAAATACTTCCAAGGGTATGATTAAGTTGATCTGAGTTTGCTTTAAAATTTCACTTTCTCATTGTCATAATGTCTGTAAAATCTAAAAATCACAATTATGACAGAGAGGAAATTTCTTTTGATATTAGGTGTTTAGAGTCCAGAAAAGAGTAGAGAGTATTTTACCTGTCGTACACTGATACAATTTGTAAATCTATTGTTTGGCTTTGGGAACCTTACCTAATTAGGGCTTGTGACTACCTCCAAGTTCATTCATACTCTTAGATAAATGGTTCTCATACGTGATCTGGTGTGATTTATAACATGCTCTCTGTCTTGTGTTCTTAGAAGATCTAAAACCCTTGGATTTTTGCTAGTTCTATTGTAAGTCTGCTAATTAAAGTGTGTTTGGAATAAATTCTACTTCTAATTTAAGCACTAAAATGTTTTAATCTTACATTTTCTAAGAAGTAAGTAACAAATTTGTTTGGTTACACTATGTTTAAAAGTGATTCTATTAATTATTGTTGGAGTACCATAATTAAATTTATCATAACCTATTAGCTTAAGTTTTTGGGTTGATTGGTGATTTAAAATAGTATCAGAGTAGGAGATCTTGAGTTTGAATCTTGTAAAGTCGTTTTCTCCCCAATTAATATTGATTTCTACTTGTTAGGTCTTTCTACAAATTTTCAAGCCCCCAAGTGAGGGGAAGTGTTGGAGTATATAATTAAATTTACATAACCTATTAGCTTAAGCTTTTGGAATGATTGATGATTTAACATGGTGTCGAGCAGGAGGTCCTGAGTTCGAACCCCTGTAACGTCGTTTCCTCCCAATTAATATTGATTTCCAGTTGTTTGCTTTTCTTCAAATTTTCAAGTCCGCCCACAAGTGAGACTAATATTGATATAATTAAATTTACCATTACCTATCAGTTAAACTTTTGGGTTGATTGGTGATTTAAAAATTATATATATTTATTTAAAAGGCATATTTTTTCAAAAGTTATTCCAAACAAACTATAAGTCACATTTTGTACTCAGCTTCTCTTTGGCATTCCTATTATTTATAATGCTGTCATTTTTTCTGTCTCCAATCCTTCTGCTTATATTTCTATCTACCTGATTCTCTCTTTCCATATCCAAGTTGGATCGAGCATAAATTTTATCATGTATTTGGCCTTTCAAGATCTCAACAACAAGAAGCATAACCATCAGATACAGGATCGTCATTCCCAATCTCATCACCAATGGCCTCCAAGTATCCGTAGGTTTTCTGTAGATCTAATGAGAAGATGAATACCAATTAGTAATAATCAAGTATGAATCAGATATTTCTGCAGTCTGAGAGGTACAAAGGATTAACTGTTTTCAGAATGTGCGAGTTTCAGGGTACTTGATGCCTAATGGGTACAATACATTAGCTTAGCAAGCGGGGGATTTGGGTTCAAACAAGCAAGTATGAAATAGGCCACTTGAACTTGGAAGATTATCGAAGCAATATTTAAAATTTGTTTAAAATGCATTTTCTCTGAGTCTTCACCGACTAAATGCAACATTTGGGTGCTATAGTAATGGATATTACAAGGATGTGTTGGCTTTTTTTTTTTTTTTTTTTATTTTAATAATATGATTTCAATTGTTGAATTGATGGATTTCTTTGTTGCTAATCAGACTAATTCAAAAATGCGGTTGGTATTATGTATGCATCATAAGAGTACCAACTAGCAAAGCTGCTCTTCCTGTTTATCCTTTCAAGAAAAAAACACTGTTAGGGTTGTGATTAAGTTTCACATTATTAGTTAGAAGTGCGAAAAAGATCAGTGTTTCTCAGTAAAGACAGCATTTTTTGATATTATGTGGTCTTTTGGGTAAATTTTAAAAACAAATTCACTTGAGCTTAAGTCTAAAGTGGCTAATATCATATAAATGTGAGACAAGAAGTTGGCACATTTTCCTAACACATGCAAAGGTGTAACTCCATTCTTTCTGTTGTTTAAATGCTTGTGATATTAGCTTATATCATTTGCTGTCTCTTATTTATATCCATTCAACCTTAACATGGGTTTGATCTCTCGCTGCCATCTTGTTCTATTTTTAAAACATTAAGTGTAACCTTTGATGCAATTTAATGGTAGTTTCATTGTTTGATGAAGGGTGGACGCCTGGAGTTGCAGTCCCATTCTAGCATCTGAGCAGTTCCTTAGCAAGTTTTGTGTGAATGTGATTGTGAGAAAAGTATCCAAAGAGTCTTCACCAATTCGGTTGCAGTCCATGTCCAGTGTGTCTCACTTCCAAGTTCCAACAGCTTCTTTTTTTTGAAAAGTTGTACCAAACCATGTACAGTACATGAAGGCATTGGGTTGCCTACCTCTTTTGGCTTGTACTCATGGATTAGCACCACGGTGGCTGAGTTTGTAAATATGGTTTTTTCCTGCTTGGGGATGGTAACAATGAAAAAGTGAAAGAAGAGTACCAGAAATGTGTGTTTACACTTTCAGTGAGCTGACCTTAGACTGATGTTCATTTGTAGAGCATTTTCAGATTCCAGCTCGGGTTGCCTTATGTTAAAGTCGGGGTTCATCAGTCAGCTTGACCTGACATTGTGTGGATCATTTGAGAAATGATGGTGTTAGATATTTGACATGGATTGTAAGGAATGAATGTCTGTCTGTAAGTAAAAAGTGCTTGGTAGAGAATCACTTTTATGCTAATAATCCGTGAGGGATGGAATTGGTTTGATCAGGTGTTTGACTGTGGACAGAGGAAGTTGTAATGATTTATTTTTGTGAAAAAGCACCAATCACGGCAAACAAACAGCGCCCAATCCAACCCACATGCTAATTATTGAGCCCAAGATCACATAATACAATCATGAAGATAAAACTCAAGATCAGTGTTGCTTTTGAATTTGGTGTACAAAATGTCTTGATCCGTTTAATTCTCAAAGTAGAGAGAGAGAGAGCAGATGAGGTTGGTGTTTGTTGGGAGGATTGGAAAGCAGCTGTTTTTAGTACAACACAAGTGGATGAGAGAATTTAAACCTCCGACCCCAAGAAAAGAAAAGACGTACATGTCAATTATTGTTGAGCTATCTCACGTTTCAGTTTGTCGAAAGACAAGTGAAATATGAGAATTTAACCCTCTGATCTCAAGAAAATGAGTCGATGTCAATTATTGTTGAGCTAAACTCATCGGTGGAATGCAACTATTTTGATCCACATGATAATAATCAATTAAATTCGGATCACTCACTTGTCTTTCAATTTCAGATCTGCTTTAACTCCTCTTCCCCACCACCATTTTGGCCTCTAGCTCCAACCTCCCTATAATTTCCCTCTAAGAAATTTTGTGTCATCCATGGTCCACCATCCACTTTTATCATTCATTTATGTGAACTGTCTGTCATCTATTCCTTTTCATCCATATCTGTATATATTAAAATCATTGCCAGTTTGTGCCTCCTTGTAGCATTTGAATGTAGGGTAAAATGGTATTTATTTGGTATTTGACTC

mRNA sequence

ACCCGATTTGAAAGCTTCGCTGTCGAGTTTGTCGCAGCACATCAATGATCTGTAGTGACACGAAATTCGGAAAGAAAATGCAGTAAAATGGGTCAAACTCATAAGGGAAGGGAGTGGGCGAATCCTTCAAACCAAAGTTGAAGATCAAACCACAAACCCCATTGAAGAAGAAGAACACAGACCCACCGAAATCACTAATCAGGCACATAATTATCTCCTTCATCCACAGACAAATCAATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCGGATGCTTGGCAATGCACTGCACGCTTTCCTGATCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAACTCTCTCGCCTCGCCCTCTCTCTATGGACCTTCCTCTGTGTCCCTCCCCCTGGTTCCTTCTACTATTACTACTACTCCTCTGATTCCGATTCTTCTTCCGAATGACTTCTCTCTCTGAGTTCATCGAGTATGATAGAAACTGACAGCGAGCGTGTATTGAAGACAACACCATATATTACTTGAATTGAAAGATTGCTTACTAGTTCGTCGACTGAGTGATCTAAACCAACGCCATCTTTTGTGCCTTCTGAAGTAAAGTTTGTTTTCTTTGATTTCGTTGGTTGAGGGTGGACGCCTGGAGTTGCAGTCCCATTCTAGCATCTGAGCAGTTCCTTAGCAAGTTTTGTGTGAATGTGATTGTGAGAAAAGTATCCAAAGAGTCTTCACCAATTCGGTTGCAGTCCATGTCCAGTGTGTCTCACTTCCAAGTTCCAACAGCTTCTTTTTTTTGAAAAGTTGTACCAAACCATGTACAGTACATGAAGGCATTGGGTTGCCTACCTCTTTTGGCTTGTACTCATGGATTAGCACCACGGTGGCTGAGTTTGTAAATATGGTTTTTTCCTGCTTGGGGATGGTAACAATGAAAAAGTGAAAGAAGAGTACCAGAAATGTGTGTTTACACTTTCAGTGAGCTGACCTTAGACTGATGTTCATTTGTAGAGCATTTTCAGATTCCAGCTCGGGTTGCCTTATGTTAAAGTCGGGGTTCATCAGTCAGCTTGACCTGACATTGTGTGGATCATTTGAGAAATGATGGTGTTAGATATTTGACATGGATTGTAAGGAATGAATGTCTGTCTGTAAGTAAAAAGTGCTTGGTAGAGAATCACTTTTATGCTAATAATCCGTGAGGGATGGAATTGGTTTGATCAGGTGTTTGACTGTGGACAGAGGAAGTTGTAATGATTTATTTTTGTGAAAAAGCACCAATCACGGCAAACAAACAGCGCCCAATCCAACCCACATGCTAATTATTGAGCCCAAGATCACATAATACAATCATGAAGATAAAACTCAAGATCAGTGTTGCTTTTGAATTTGGTGTACAAAATGTCTTGATCCGTTTAATTCTCAAAGTAGAGAGAGAGAGAGCAGATGAGGTTGGTGTTTGTTGGGAGGATTGGAAAGCAGCTGTTTTTAGTACAACACAAGTGGATGAGAGAATTTAAACCTCCGACCCCAAGAAAAGAAAAGACGTACATGTCAATTATTGTTGAGCTATCTCACGTTTCAGTTTGTCGAAAGACAAGTGAAATATGAGAATTTAACCCTCTGATCTCAAGAAAATGAGTCGATGTCAATTATTGTTGAGCTAAACTCATCGGTGGAATGCAACTATTTTGATCCACATGATAATAATCAATTAAATTCGGATCACTCACTTGTCTTTCAATTTCAGATCTGCTTTAACTCCTCTTCCCCACCACCATTTTGGCCTCTAGCTCCAACCTCCCTATAATTTCCCTCTAAGAAATTTTGTGTCATCCATGGTCCACCATCCACTTTTATCATTCATTTATGTGAACTGTCTGTCATCTATTCCTTTTCATCCATATCTGTATATATTAAAATCATTGCCAGTTTGTGCCTCCTTGTAGCATTTGAATGTAGGGTAAAATGGTATTTATTTGGTATTTGACTC

Coding sequence (CDS)

ATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCGGATGCTTGGCAATGCACTGCACGCTTTCCTGATCGCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAACTCTCTCGCCTCGCCCTCTCTCTATGGACCTTCCTCTGTGTCCCTCCCCCTGGTTCCTTCTACTATTACTACTACTCCTCTGATTCCGATTCTTCTTCCGAATGA

Protein sequence

MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE

Homology

[Close]

BLAST of Tan0005046 vs. NCBI nr
Match: XP_022153861.1 (uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153864.1 uncharacterized protein LOC111021275 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 6.9e-31
Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVFSSLIVLSVAHLSADA QC A FPDRLTSHQLLYLLFGFPLQQLSRLALS WTF CVP
Sbjct: 1  MVFSSLIVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVP 60

Query: 61 PPGSFYYYYYSSDSDSSS 79
          PPGSFYYYYYSSDSD+SS
Sbjct: 61 PPGSFYYYYYSSDSDASS 78

[Close]

BLAST of Tan0005046 vs. NCBI nr
Match: XP_022958637.1 (uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958640.1 uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_023533512.1 uncharacterized protein LOC111795367 [Cucurbita pepo subsp. pepo] >KAG7035790.1 hypothetical protein SDJN02_02588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.0 bits (354), Expect = 4.5e-30
Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVF+SLIVLSVAHLSADA QC AR PDRLTSHQLLY+LF +PLQQLSRLALS+WTFLCVP
Sbjct: 1  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVP 60

Query: 61 PPGSFYYYYYSSDSDSSSE 80
          PPGSFYYYYYSSD DSSSE
Sbjct: 61 PPGSFYYYYYSSDYDSSSE 79

[Close]

BLAST of Tan0005046 vs. NCBI nr
Match: KAA0040112.1 (hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK21737.1 hypothetical protein E5676_scaffold859G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-26
Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 4   SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPG 63
           ++LIVLSVAHLSAD  Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWTF CVPPPG
Sbjct: 42  ANLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 101

Query: 64  SFYYYYYSSDSDSSS 79
           SFYYYYYSSDSD SS
Sbjct: 102 SFYYYYYSSDSDLSS 116

[Close]

BLAST of Tan0005046 vs. NCBI nr
Match: PON98040.1 (hypothetical protein TorRG33x02_061140 [Trema orientale])

HSP 1 Score: 121.3 bits (303), Expect = 3.7e-24
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVF+SL+VLSVAH+SADAWQC A FP+RL+SHQLL L+F FPLQQL RLAL LWTFLC+P
Sbjct: 1  MVFNSLLVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLP 60

Query: 61 PPGSFYYYYYSSDSDSSS 79
          PP SFY Y YSSDSD  S
Sbjct: 61 PPDSFYSYAYSSDSDDDS 78

[Close]

BLAST of Tan0005046 vs. NCBI nr
Match: XP_030478483.1 (uncharacterized protein LOC115695566 [Cannabis sativa])

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVF+SL+V+SVAH+SADAWQC A FP+RL+S QLL L+F FPLQQL R AL LWTFLC+P
Sbjct: 1  MVFNSLLVVSVAHVSADAWQCLACFPERLSSRQLLDLVFCFPLQQLGRFALCLWTFLCLP 60

Query: 61 PPGSFYYYYYSSDSDS 77
          PP SFY Y YSSD DS
Sbjct: 61 PPDSFYSYSYSSDGDS 76

[Close]

BLAST of Tan0005046 vs. ExPASy TrEMBL
Match: A0A6J1DKC2 (uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021275 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVFSSLIVLSVAHLSADA QC A FPDRLTSHQLLYLLFGFPLQQLSRLALS WTF CVP
Sbjct: 1  MVFSSLIVLSVAHLSADASQCIACFPDRLTSHQLLYLLFGFPLQQLSRLALSFWTFFCVP 60

Query: 61 PPGSFYYYYYSSDSDSSS 79
          PPGSFYYYYYSSDSD+SS
Sbjct: 61 PPGSFYYYYYSSDSDASS 78

[Close]

BLAST of Tan0005046 vs. ExPASy TrEMBL
Match: A0A6J1H2D5 (uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC111459803 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-30
Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVF+SLIVLSVAHLSADA QC AR PDRLTSHQLLY+LF +PLQQLSRLALS+WTFLCVP
Sbjct: 1  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVP 60

Query: 61 PPGSFYYYYYSSDSDSSSE 80
          PPGSFYYYYYSSD DSSSE
Sbjct: 61 PPGSFYYYYYSSDYDSSSE 79

[Close]

BLAST of Tan0005046 vs. ExPASy TrEMBL
Match: A0A5A7T9K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001090 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.6e-27
Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 4   SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPG 63
           ++LIVLSVAHLSAD  Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWTF CVPPPG
Sbjct: 42  ANLIVLSVAHLSADVSQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTFFCVPPPG 101

Query: 64  SFYYYYYSSDSDSSS 79
           SFYYYYYSSDSD SS
Sbjct: 102 SFYYYYYSSDSDLSS 116

[Close]

BLAST of Tan0005046 vs. ExPASy TrEMBL
Match: A0A0A0L0B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-26
Identity = 64/72 (88.89%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 7   IVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFY 66
           IVLSVAHLSADA Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWT  CVPPPGSFY
Sbjct: 63  IVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFY 122

Query: 67  YYYYSSDSDSSS 79
           YYYYSSDSD SS
Sbjct: 123 YYYYSSDSDLSS 134

[Close]

BLAST of Tan0005046 vs. ExPASy TrEMBL
Match: A0A2P5FJR7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVP 60
          MVF+SL+VLSVAH+SADAWQC A FP+RL+SHQLL L+F FPLQQL RLAL LWTFLC+P
Sbjct: 1  MVFNSLLVLSVAHVSADAWQCLACFPERLSSHQLLDLVFCFPLQQLGRLALCLWTFLCLP 60

Query: 61 PPGSFYYYYYSSDSDSSS 79
          PP SFY Y YSSDSD  S
Sbjct: 61 PPDSFYSYAYSSDSDDDS 78

[Close]

BLAST of Tan0005046 vs. TAIR 10
Match: AT1G55365.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13500.1); Has 29 Blast hits to 29 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLC 60
          MVF+S +V++VA +S D WQ   R P   R+ + QL  +   FP+ QLSR  L LWTF+C
Sbjct: 1  MVFNSAMVMAVAEVSTDTWQLIWRVPSSQRIDTEQLFDIAVCFPIHQLSRFVLCLWTFMC 60

Query: 61 VPPPGSFYYYYYSSDSDSSS 79
          +P   SFY Y Y + S SSS
Sbjct: 61 LPSSDSFYSYTYETLSASSS 80

[Close]

BLAST of Tan0005046 vs. TAIR 10
Match: AT5G56520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-10
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 1  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLC 60
          MVF    V+SVAH+SA+ +Q     P  DR++S ++L L+  FPLQQL R  L  W ++C
Sbjct: 1  MVFRGDTVVSVAHISAEIFQRLRWIPPSDRISSGEMLQLVCCFPLQQLGRFVLWFWNYIC 60

Query: 61 VPPPGSFYYYYYSSDSD 76
          VPPP   Y+     D D
Sbjct: 61 VPPPEILYFDGRRDDDD 77

The following BLAST results are available for this feature:

BLAST of Tan0005046 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153861.1	6.9e-31	92.31	uncharacterized protein LOC111021275 [Momordica charantia] >XP_022153863.1 uncha...	[more]
XP_022958637.1	4.5e-30	88.61	uncharacterized protein LOC111459803 [Cucurbita moschata] >XP_022958638.1 unchar...	[more]
KAA0040112.1	1.8e-26	86.67	hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa] >TYK2173...	[more]
PON98040.1	3.7e-24	76.92	hypothetical protein TorRG33x02_061140 [Trema orientale]	[more]
XP_030478483.1	4.5e-22	73.68	uncharacterized protein LOC115695566 [Cannabis sativa]	[more]

BLAST of Tan0005046 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKC2	3.4e-31	92.31	uncharacterized protein LOC111021275 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1H2D5	2.2e-30	88.61	uncharacterized protein LOC111459803 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]
A0A5A7T9K4	8.6e-27	86.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L0B8	5.6e-26	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268060 PE=4 SV=1	[more]
A0A2P5FJR7	1.8e-24	76.92	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_061140 PE=4 SV...	[more]

BLAST of Tan0005046 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55365.1	1.2e-12	47.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G56520.1	7.2e-10	44.16	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35104	OS03G0807000 PROTEIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005046.1	Tan0005046.1	mRNA
Tan0005046.2	Tan0005046.2	mRNA