Tan0005040 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACTCAAAGTTTCTATATAACCTGCAACTGCAACCATCTTCCTAGCGAAAAAGGGGTTAGAGCTAACGCCAATATAGCTGAAGAGGTTCATTTTTTAAGGCAACTAAAAGTGAAAGAAAGGCTTGAATTGAAGACTTCAGAAATCAAAGAAGTGGGGGTTTGATTTTTACCCTACAAGAAAGTAAGAAAGTTTGGGTCTGCACTAGCACTGCAGCAAAAGCTTTAAACTGAGCGTCCATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACTCATGTGGCTAAAAAGGGTGATTTGTTCACTCTTCTTCACATTGTTTCTCACTCAAACTCAAACAAGCACCTCTCTGAAACTCCGGCTTCTGATTCTTCTTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTATAACTCCTTAATTTTGCCTTCACTTTGCATTTTTATCTTTGGATTGGAAAGATGTTTGATATATATATATATAAACCTACCTGGTCTTTCATGGGTTTGGCTTGATCTTCTGTCTTTACAACATTCAACTTCGTTCTCAAGCTTTTCTTGAAAATATTTTCACTGTTTTCTCATCCTGCAAACTCAAGATAAATGCATGTAATTTCACTTTTTAATGCATTTACATCGAAATTTAAAAGAAATGAAGAGGCACGAGAATATGTACGGTGGATAATATATTGAGTGGTGTATAGATCTATTGAAAATGATTGAAAAAGGTTAGAATCTGAAGACACTTTATTCATTGAAAAGGTTCAGCCTTTGATTATGGGATGTCAAGTATAAACTAATTATTTCTAATTCTCTCTCACTTGAAAAGTATGTGTGGGATATGGGCCATATGGGGAACAACTTAGTAATGGGTCATCTTTAATTTAACCCCCTTGGTTTCCGCTCCCATGCATGTGTTAATTAATAAAATAAGGGGGAAAAAACAAAGCAAAGCATAGTAGGGAGAGAAATCTCGAGTTTCACTAAGCCACTGGCTACTTAGCTTAGCTAGAGCCTTTTCCTAGTGCTCCCCCATTATCCAGATTCATCTTTGTAAACGACTTAGCTTAGAATGAGCCATCTTTTAAAGTATTACAGATCAGTGCAGTGTAGGGTTCTGTGGGTGATTTAAAATTTGGTTCAAAATTTCAGGTGGAAGTTGAAGCACTTGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTAGTGGTGCCCCAGAAAAAGCCCTCTCTCTTTAGCTGGTGGGTCCCAACCTCTTACATCATCTTATTATATATATTGGCCTTTTCATCCAAACAAAAATGAATAAATAAATAAAGTAAAAAGTTTGAATGGTCATGATTACTAACCTGGTCGACATGGTCATTTCTCTTGCAGCTTCTGCGGGACCAGCAGCTCAGAGCAGCTTATGGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAAACAGACCAATGGCATGGGCGGTTACCTTATCAACAGCAGGTGGCAGAAGAACTTCTGGCTTCTTGCTTAG GAAAAACTCAAAGTTTCTATATAACCTGCAACTGCAACCATCTTCCTAGCGAAAAAGGGGTTAGAGCTAACGCCAATATAGCTGAAGAGGTTCATTTTTTAAGGCAACTAAAAGTGAAAGAAAGGCTTGAATTGAAGACTTCAGAAATCAAAGAAGTGGGGGTTTGATTTTTACCCTACAAGAAAGTAAGAAAGTTTGGGTCTGCACTAGCACTGCAGCAAAAGCTTTAAACTGAGCGTCCATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACTCATGTGGCTAAAAAGGGTGATTTGTTCACTCTTCTTCACATTGTTTCTCACTCAAACTCAAACAAGCACCTCTCTGAAACTCCGGCTTCTGATTCTTCTTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTGGAAGTTGAAGCACTTGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTAGTGGTGCCCCAGAAAAAGCCCTCTCTCTTTAGCTGCTTCTGCGGGACCAGCAGCTCAGAGCAGCTTATGGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAAACAGACCAATGGCATGGGCGGTTACCTTATCAACAGCAGGTGGCAGAAGAACTTCTGGCTTCTTGCTTAG ATGGAAGGGTTTGAGAGGTACGGTAAGAAGAGGGTGATGGTGGTGGTGGATCATACATCGCAGTCCAAGCATGCTATGATGTGGGCTCTAACTCATGTGGCTAAAAAGGGTGATTTGTTCACTCTTCTTCACATTGTTTCTCACTCAAACTCAAACAAGCACCTCTCTGAAACTCCGGCTTCTGATTCTTCTTCATTTCTTGCTAACTCTCTTGGCTACCTCTGCAAAGCTTCTAGACCTGAGGTGGAAGTTGAAGCACTTGTGATTCAAGGCCCAAAACTAGAGACAGTTTTGAGCCAAGTGAAGAAGCTTGAGGCATCTGTTTTAGTGGTGCCCCAGAAAAAGCCCTCTCTCTTTAGCTGCTTCTGCGGGACCAGCAGCTCAGAGCAGCTTATGGAACAGTGCATCAACCATGCAGATTGCTGTACAATTGGGGTTAGAAAACAGACCAATGGCATGGGCGGTTACCTTATCAACAGCAGGTGGCAGAAGAACTTCTGGCTTCTTGCTTAG MEGFERYGKKRVMVVVDHTSQSKHAMMWALTHVAKKGDLFTLLHIVSHSNSNKHLSETPASDSSSFLANSLGYLCKASRPEVEVEALVIQGPKLETVLSQVKKLEASVLVVPQKKPSLFSCFCGTSSSEQLMEQCINHADCCTIGVRKQTNGMGGYLINSRWQKNFWLLA Homology
BLAST of Tan0005040 vs. NCBI nr
Match: XP_038898922.1 (uncharacterized protein LOC120086377 [Benincasa hispida]) HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81 Identity = 156/170 (91.76%), Postives = 160/170 (94.12%), Query Frame = 0
BLAST of Tan0005040 vs. NCBI nr
Match: XP_023523706.1 (uncharacterized protein LOC111787863 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80 Identity = 155/170 (91.18%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of Tan0005040 vs. NCBI nr
Match: XP_022981064.1 (uncharacterized protein LOC111480323 [Cucurbita maxima] >XP_022981065.1 uncharacterized protein LOC111480323 [Cucurbita maxima]) HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79 Identity = 156/170 (91.76%), Postives = 160/170 (94.12%), Query Frame = 0
BLAST of Tan0005040 vs. NCBI nr
Match: XP_022940999.1 (uncharacterized protein LOC111446414 [Cucurbita moschata]) HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79 Identity = 154/170 (90.59%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of Tan0005040 vs. NCBI nr
Match: KAG6608056.1 (hypothetical protein SDJN03_01398, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303.9 bits (777), Expect = 8.6e-79 Identity = 153/170 (90.00%), Postives = 160/170 (94.12%), Query Frame = 0
BLAST of Tan0005040 vs. ExPASy TrEMBL
Match: A0A6J1IYE7 (uncharacterized protein LOC111480323 OS=Cucurbita maxima OX=3661 GN=LOC111480323 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 6.5e-80 Identity = 156/170 (91.76%), Postives = 160/170 (94.12%), Query Frame = 0
BLAST of Tan0005040 vs. ExPASy TrEMBL
Match: A0A6J1FLX8 (uncharacterized protein LOC111446414 OS=Cucurbita moschata OX=3662 GN=LOC111446414 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 8.4e-80 Identity = 154/170 (90.59%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of Tan0005040 vs. ExPASy TrEMBL
Match: A0A5A7TPE6 (UspA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00780 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79 Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Tan0005040 vs. ExPASy TrEMBL
Match: A0A0A0KYK7 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G364040 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79 Identity = 153/172 (88.95%), Postives = 160/172 (93.02%), Query Frame = 0
BLAST of Tan0005040 vs. ExPASy TrEMBL
Match: A0A1S3B978 (uncharacterized protein LOC103487581 OS=Cucumis melo OX=3656 GN=LOC103487581 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79 Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Tan0005040 vs. TAIR 10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54 Identity = 110/162 (67.90%), Postives = 126/162 (77.78%), Query Frame = 0
BLAST of Tan0005040 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 95.1 bits (235), Expect = 5.7e-20 Identity = 57/180 (31.67%), Postives = 98/180 (54.44%), Query Frame = 0
BLAST of Tan0005040 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19 Identity = 62/167 (37.13%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Tan0005040 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 89.4 bits (220), Expect = 3.1e-18 Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 0
BLAST of Tan0005040 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16 Identity = 56/169 (33.14%), Postives = 85/169 (50.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|