Tan0005022 (gene) Snake gourd v1

Overview


Name	Tan0005022
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L6
Location	LG04: 83391229 .. 83393327 (-)
RNA-Seq Expression	Tan0005022
Synteny	Tan0005022

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTACTGATTTAGGGTTTCGGGGAGAGGAGACGCTACCAAGTTTCCAGAACAGAAGAAGTTTAGCAATGGCTCCCAAGACAGCAAGAGTTAGCCGAAACCCTGATCTCATTCGAGGAGTTGGAAAATATTCGAGGTCTAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGCGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGACGCTCCGGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGACGACGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCGATCTCTCTCAATGTCTCCCTTTTGATGTTTGTTTACTGCATGATTTGGAACGTATATTGTTTGGTTTATTTTAACTTTGTTATGGTTGTGAAACTGAGGATTTTGGAGTCAACTAAGAAACAATTTCTTCAATTACATGAAATTACAAAATGAATGGGGCAGTGCCCTAGCCTGTAGCAGAGGAGATTGCCCAAAAATTAATCTCCAATTTGTTTTTGGTTTCCAGATTCTAAATAATGTTGCTCATTTTCCAAATAATAAACATTGGGTTCAGTTCAATCAAATGATCGTGGGGTGTATTCACATAACTCAGGTTGTCAATTTTATACTATTTGCAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTTACCGGTTAGTATTGGCGATTTTCTCTAATTGCCTATCACATTGTGTTGGGGGTTGGGATGTTTTATTTTCTGTTCATGGGGAATTAGTTTTTTCCCCTCTACATTCATTGTGGATTTGTGTTAAATTTGCATTGGAAGTTTCATTTGTTATTTTTTTTGCTATCTTAACAATTGTTTGCCTTAGGGGTTTACATGTTATCTTAAATGTCCTGCCTGCATGAGTTCTCCTATCGAGAACGAAGAAACATGGTAATTGGGGTTTCGTATTTTGGCAATATTAATTGTTTAACCTCGCAGCCAGCTAATATTGGAATGTCTGATGCCTCCCATGCGGTCTACATGCCCTGCGAATGGTCTATTGAAATGTCTCATGCCTTGTTTTCTGACTATATGTTCTGAAAATTGTCCTTTTACATATCTTAAGTTTCTAAGATTCATTGTCAATACCTCTTACAGTTATCCTCTTGCAGTTGTGGGTAGGGTTGAGGGGTTGGGCTAGATGATGTGGACTGTTGTCCTAAATCTTTAGGAGAAAAGATGCATATAAAGTAGTGATTAGCCGATTCTTTGATTTTTAAATCTGCAATTCTCAAACCTCCAAGGGGTTGTCTAAATGTAAAGTTTGTTACTTTAGGACCATTCAAGGTCAATGGTGTTCCCTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTAGACATTGCTGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGAGAGTTTTTTGAGGCAGAGAAGGAGGTTCGTAGTTGTTCTCATCATGTTATTTTTTTCAAGTGATTCATTTTTCATCTTTTCTTTGACCTAATTTCTAGTCATCATTGTTTTACATGTAGGAAAAAAGTGCACTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCGGCTCTTCTCAAGTCCATTGAAGCAGTGTCAGACTTAAAGACTTACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCTCATGAGCTTGTTTTCTAGATATTTGCTGTTTGCTGTCTGATACTTCTCTTGTGGAATTGGTCACTACAATTTTCTTGTTTATGTTTTGCTATGAGGATTTTAGATTTGAAATTATCTCTCGCAATGAATTTTGCAGTGGACTTTTATTCATCAAATTTTGTTTATGTAGCTTCATTTGACTACTGATAGTGATAAGATTTGTAACTTTTCCTCTATTCCTATCATTTTCTTTATGCTTATAAAATGCTCAAGAGGAATCATTTGAAAAGATAGTTGACTTAACTTCA

mRNA sequence

GTGTACTGATTTAGGGTTTCGGGGAGAGGAGACGCTACCAAGTTTCCAGAACAGAAGAAGTTTAGCAATGGCTCCCAAGACAGCAAGAGTTAGCCGAAACCCTGATCTCATTCGAGGAGTTGGAAAATATTCGAGGTCTAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGCGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGACGCTCCGGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGACGACGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTTACCGGACCATTCAAGGTCAATGGTGTTCCCTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTAGACATTGCTGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGAGAGTTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCGGCTCTTCTCAAGTCCATTGAAGCAGTGTCAGACTTAAAGACTTACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCTCATGAGCTTGTTTTCTAGATATTTGCTGTTTGCTGTCTGATACTTCTCTTGTGGAATTGGTCACTACAATTTTCTTGTTTATGTTTTGCTATGAGGATTTTAGATTTGAAATTATCTCTCGCAATGAATTTTGCAGTGGACTTTTATTCATCAAATTTTGTTTATGTAGCTTCATTTGACTACTGATAGTGATAAGATTTGTAACTTTTCCTCTATTCCTATCATTTTCTTTATGCTTATAAAATGCTCAAGAGGAATCATTTGAAAAGATAGTTGACTTAACTTCA

Coding sequence (CDS)

ATGGCTCCCAAGACAGCAAGAGTTAGCCGAAACCCTGATCTCATTCGAGGAGTTGGAAAATATTCGAGGTCTAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGCGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGACGCTCCGGCTGAGAAGCCGCCGAAGTTTTACCCTGCCGACGACGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTTACCGGACCATTCAAGGTCAATGGTGTTCCCTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTAGACATTGCTGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGAGAGTTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCGGCTCTTCTCAAGTCCATTGAAGCAGTGTCAGACTTAAAGACTTACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCTCATGAGCTTGTTTTCTAG

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Homology

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BLAST of Tan0005022 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 4.2e-103
Identity = 190/228 (83.33%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0005022 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-103
Identity = 188/230 (81.74%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Tan0005022 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-103
Identity = 190/228 (83.33%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0005022 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.9e-100
Identity = 187/224 (83.48%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 DKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           +KKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of Tan0005022 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 4.2e-47
Identity = 124/257 (48.25%), Postives = 160/257 (62.26%), Query Frame = 0


Query: 3   PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD------- 62
           PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 63  -------------APAEKPPKFYPADDVKKPLVNKRKAKP-----TKLRSSITPGTVLII 122
                            K P++YP +DV + L++  K KP      +LRSSITPGTVLII
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLII 163

Query: 123 LTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-F 182
           LTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K  
Sbjct: 164 LTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHL 223

Query: 183 DDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYL 232
            D YF K+  +K +  EGE F+ EK EK  + + +K DQKAVD  +L  I+AV  L+ YL
Sbjct: 224 TDAYFKKKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYL 283

[Close]

BLAST of Tan0005022 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119
Identity = 227/231 (98.27%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 4.0e-119
Identity = 227/231 (98.27%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 438.0 bits (1125), Expect = 5.2e-119
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. NCBI nr
Match: XP_008461779.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa] >TYK10659.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 225/231 (97.40%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 227/231 (98.27%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 227/231 (98.27%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. ExPASy TrEMBL
Match: A0A1S3CFY6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. ExPASy TrEMBL
Match: A0A6J1J7G9 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.3e-118
Identity = 226/231 (97.84%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVS LKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of Tan0005022 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-104
Identity = 190/228 (83.33%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0005022 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 374.8 bits (961), Expect = 5.0e-104
Identity = 188/230 (81.74%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Tan0005022 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 374.8 bits (961), Expect = 5.0e-104
Identity = 190/228 (83.33%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of Tan0005022 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9C6	4.2e-103	83.33	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9FZ76	7.1e-103	81.74	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	7.1e-103	83.33	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	1.9e-100	83.48	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
P47911	4.2e-47	48.25	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of Tan0005022 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935449.1	2.3e-119	98.27	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_004149609.1	4.0e-119	98.27	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_038880885.1	5.2e-119	98.70	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_008461779.1	1.5e-118	97.84	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribo...	[more]
XP_023528566.1	2.6e-118	97.40	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0005022 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5G0	1.1e-119	98.27	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	1.9e-119	98.27	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A5D3CKB9	7.3e-119	97.84	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFY6	7.3e-119	97.84	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]
A0A6J1J7G9	1.3e-118	97.84	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1	[more]

BLAST of Tan0005022 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74060.1	3.0e-104	83.33	Ribosomal protein L6 family protein	[more]
AT1G18540.1	5.0e-104	81.74	Ribosomal protein L6 family protein	[more]
AT1G74050.1	5.0e-104	83.33	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 4.3E-17 score: 63.9
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 2.4E-16 score: 59.8
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 1.2E-39 score: 135.3
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..68
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 1.47968E-79 score: 233.594
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005022.1	Tan0005022.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome