Tan0004884 (gene) Snake gourd v1

Overview


Name	Tan0004884
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Transmembrane protein, putative
Location	LG01: 1760818 .. 1761542 (+)
RNA-Seq Expression	Tan0004884
Synteny	Tan0004884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCACATTCATCTATCACCCGATCCTCACTCGAACCTTTTGCAGCATTGATCGAAACAAAAAATGGCGCTCAGATTTTTAGTAACTCGAATGGCGTCAAATGGCTTCAGAACGGCAAATATAAGCCCTAAAACATACGCTACGGCGACGGCGCCGTGGATGAAATCTTACGCGCCGACGTCCGATTTCTCCCGGTTCGATCACCATTATCAGCAGCAGCAGAGCAAGCCGAAGGCCTCACGAGCCGGCGATTTTTTCCCCGTCTATGTGGCGATCGGAATGATCGCACTCTCTGTATCTCTCGGCTTGCACACGGCGAAGCAGCAATTGGCTCACTCGCCGTCCGTTTCCGTTCGGAAGAAGCGTAGAGAGACGATTCCGGAGGTGGCGGAGCCGGAGCACGTGGCGGAGGAGACTGAGAAGTTATTTGCTAAATCGTTCTTCAGAAAAGTGGCTCATGTTCAGGAACTTGAGAAATTCCGGGATTATAGCGTTCCTTACGATCCTCTCCTCGGCGATGCTTATGCTAACCGCCACCGTACGGAGACGCTCAGGTCCGTCGGAATCGATCCCGCTTCGAACTGAAATTAGCTTCGCTAATCGGTGATTTTTACTTTGGGTTATGAGAAAAATCTTGCGACTCTGTAATTAAGAAATAACATGTTGACAAGCTACTGTGTGAATGTAATCTCTGTAAAGTTTTCGTTATCTTCGTAGGTTTGGT

mRNA sequence

AAGCCACATTCATCTATCACCCGATCCTCACTCGAACCTTTTGCAGCATTGATCGAAACAAAAAATGGCGCTCAGATTTTTAGTAACTCGAATGGCGTCAAATGGCTTCAGAACGGCAAATATAAGCCCTAAAACATACGCTACGGCGACGGCGCCGTGGATGAAATCTTACGCGCCGACGTCCGATTTCTCCCGGTTCGATCACCATTATCAGCAGCAGCAGAGCAAGCCGAAGGCCTCACGAGCCGGCGATTTTTTCCCCGTCTATGTGGCGATCGGAATGATCGCACTCTCTGTATCTCTCGGCTTGCACACGGCGAAGCAGCAATTGGCTCACTCGCCGTCCGTTTCCGTTCGGAAGAAGCGTAGAGAGACGATTCCGGAGGTGGCGGAGCCGGAGCACGTGGCGGAGGAGACTGAGAAGTTATTTGCTAAATCGTTCTTCAGAAAAGTGGCTCATGTTCAGGAACTTGAGAAATTCCGGGATTATAGCGTTCCTTACGATCCTCTCCTCGGCGATGCTTATGCTAACCGCCACCGTACGGAGACGCTCAGGTCCGTCGGAATCGATCCCGCTTCGAACTGAAATTAGCTTCGCTAATCGGTGATTTTTACTTTGGGTTATGAGAAAAATCTTGCGACTCTGTAATTAAGAAATAACATGTTGACAAGCTACTGTGTGAATGTAATCTCTGTAAAGTTTTCGTTATCTTCGTAGGTTTGGT

Coding sequence (CDS)

ATGGCGCTCAGATTTTTAGTAACTCGAATGGCGTCAAATGGCTTCAGAACGGCAAATATAAGCCCTAAAACATACGCTACGGCGACGGCGCCGTGGATGAAATCTTACGCGCCGACGTCCGATTTCTCCCGGTTCGATCACCATTATCAGCAGCAGCAGAGCAAGCCGAAGGCCTCACGAGCCGGCGATTTTTTCCCCGTCTATGTGGCGATCGGAATGATCGCACTCTCTGTATCTCTCGGCTTGCACACGGCGAAGCAGCAATTGGCTCACTCGCCGTCCGTTTCCGTTCGGAAGAAGCGTAGAGAGACGATTCCGGAGGTGGCGGAGCCGGAGCACGTGGCGGAGGAGACTGAGAAGTTATTTGCTAAATCGTTCTTCAGAAAAGTGGCTCATGTTCAGGAACTTGAGAAATTCCGGGATTATAGCGTTCCTTACGATCCTCTCCTCGGCGATGCTTATGCTAACCGCCACCGTACGGAGACGCTCAGGTCCGTCGGAATCGATCCCGCTTCGAACTGA

Protein sequence

MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASRAGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKLFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN

Homology

[Close]

BLAST of Tan0004884 vs. NCBI nr
Match: XP_038877441.1 (uncharacterized protein LOC120069725 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 153/173 (88.44%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MALR+LVTR A+NGFRTAN SP+TY TATAPWMKSYAP +DFSRFDHH++QQQSKPKASR
Sbjct: 1   MALRYLVTRTAANGFRTANKSPRTYTTATAPWMKSYAPAADFSRFDHHHRQQQSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIGMIALSV LGLHTAKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQE+EKF DY VPYDPLLGDAYA+ HRTETL+SVGIDPASN
Sbjct: 121 FFAKSFFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHGHRTETLKSVGIDPASN 173

[Close]

BLAST of Tan0004884 vs. NCBI nr
Match: XP_022945500.1 (uncharacterized protein LOC111449717 [Cucurbita moschata] >KAG6574202.1 hypothetical protein SDJN03_28089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013263.1 hypothetical protein SDJN02_26021, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76
Identity = 149/173 (86.13%), Postives = 159/173 (91.91%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MA RFL TR+A+N FRT N SPK+YATAT   MKSYAP +DFSRFDH+YQQQQSKPKASR
Sbjct: 1   MAFRFLATRLAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHNYQQQQSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIG+IALSV+LGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQELEK R+Y VPYDP LGDAYA+RHRTETLRSVG+DPASN
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of Tan0004884 vs. NCBI nr
Match: XP_023542210.1 (uncharacterized protein LOC111802176 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 147/173 (84.97%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MA R+L TR+A+N FRT N SPK+YATAT   MKSYAP +DFSRFD +YQQQQSKPKASR
Sbjct: 1   MAFRYLATRLAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDQNYQQQQSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIG+IALSV+LGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQELEK R+Y VPYDP LGDAYA+RHRTETLRSVG+DPASN
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of Tan0004884 vs. NCBI nr
Match: XP_022968331.1 (uncharacterized protein LOC111467595 [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 146/173 (84.39%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MA R+L  R+A+N FRT N SPK+YATAT   MKSYAP +DFSRFDH YQQQQSK KASR
Sbjct: 1   MAFRYLAARVAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHDYQQQQSKLKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIG+IALSV+LGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQELEK R+Y VPYDP LGDAYA+RHRTETLRSVG+DPASN
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of Tan0004884 vs. NCBI nr
Match: XP_008439275.1 (PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo] >KAA0033690.1 uncharacterized protein E6C27_scaffold239G001600 [Cucumis melo var. makuwa] >TYK22983.1 uncharacterized protein E5676_scaffold386G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 278.5 bits (711), Expect = 4.0e-71
Identity = 144/173 (83.24%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MALR+LV+RMA+NGFRT+N S +TYATAT P MKSYAPT+DFS FDH     QSKPKASR
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDH-----QSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIGMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQE+EKF DY VPYDPLLGDAYA+ HRTE+L+SVGIDPA N
Sbjct: 121 FFAKSFFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of Tan0004884 vs. ExPASy TrEMBL
Match: A0A6J1G139 (uncharacterized protein LOC111449717 OS=Cucurbita moschata OX=3662 GN=LOC111449717 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76
Identity = 149/173 (86.13%), Postives = 159/173 (91.91%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MA RFL TR+A+N FRT N SPK+YATAT   MKSYAP +DFSRFDH+YQQQQSKPKASR
Sbjct: 1   MAFRFLATRLAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHNYQQQQSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIG+IALSV+LGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQELEK R+Y VPYDP LGDAYA+RHRTETLRSVG+DPASN
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of Tan0004884 vs. ExPASy TrEMBL
Match: A0A6J1HUK3 (uncharacterized protein LOC111467595 OS=Cucurbita maxima OX=3661 GN=LOC111467595 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.0e-74
Identity = 146/173 (84.39%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MA R+L  R+A+N FRT N SPK+YATAT   MKSYAP +DFSRFDH YQQQQSK KASR
Sbjct: 1   MAFRYLAARVAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHDYQQQQSKLKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIG+IALSV+LGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQELEK R+Y VPYDP LGDAYA+RHRTETLRSVG+DPASN
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of Tan0004884 vs. ExPASy TrEMBL
Match: A0A5D3DHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00890 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 144/173 (83.24%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MALR+LV+RMA+NGFRT+N S +TYATAT P MKSYAPT+DFS FDH     QSKPKASR
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDH-----QSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIGMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQE+EKF DY VPYDPLLGDAYA+ HRTE+L+SVGIDPA N
Sbjct: 121 FFAKSFFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of Tan0004884 vs. ExPASy TrEMBL
Match: A0A1S3AZ27 (uncharacterized protein LOC103484107 OS=Cucumis melo OX=3656 GN=LOC103484107 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 144/173 (83.24%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MALR+LV+RMA+NGFRT+N S +TYATAT P MKSYAPT+DFS FDH     QSKPKASR
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDH-----QSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIGMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAHVQE+EKF DY VPYDPLLGDAYA+ HRTE+L+SVGIDPA N
Sbjct: 121 FFAKSFFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of Tan0004884 vs. ExPASy TrEMBL
Match: A0A0A0L610 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183970 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.0e-70
Identity = 141/173 (81.50%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MALRFLVTRMASNGFRTANISPKTYATATAPWMKSYAPTSDFSRFDHHYQQQQSKPKASR 60
           MALR+LV+RMA+NGF+T+  S +TYATAT P MKSYAPT+DFS F H     QSKPKASR
Sbjct: 1   MALRYLVSRMAANGFKTSYGSTRTYATATTPRMKSYAPTADFSHFHH-----QSKPKASR 60

Query: 61  AGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120
           AGDF PVYVAIGMIALSV LGLHTAKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 LFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDPASN 174
            FAKSFFRKVAH+QE+EKF DY VPYDPLLGDAYA+ HRTE+L+SVGIDPA N
Sbjct: 121 FFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of Tan0004884 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 61/149 (40.94%), Postives = 92/149 (61.74%), Query Frame = 0


Query: 23  KTYATA-TAPWMKSYAPTSDFSRFDHHYQQQQSKPKASRAGDFFPVYVAIGMIALSVSLG 82
           +TY  A T P  K+Y+  +       +  Q+ +   A+  GDF PVYV+IG+I+LSV+ G
Sbjct: 17  RTYTKATTVPRSKAYSTAA-----TEYGGQRTATTAAATKGDFTPVYVSIGLISLSVTFG 76

Query: 83  LHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKLFAKSFFRKVAHVQELEKFRD 142
           ++TA   L  +P V V KK RET+PE+ +P+ V  E ++   +S+FRK+AHVQE +K   
Sbjct: 77  VYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDK--- 136

Query: 143 YSVPYDPLLGDAYANRHRTETLRSVGIDP 171
             V  DP+  D +A++ R  TL+ VG+DP
Sbjct: 137 QDVISDPIRKDQFAHKPRALTLKDVGVDP 157

[Close]

BLAST of Tan0004884 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 52  QQSKPKASRAGDFFPVYVAIGMIALSVSLGLHTAKQQLAHSPSVSVRKKRRETIPEVAEP 111
           +Q+  K S  G+F PV +  G + L+V +  H+ KQQL H+P++S RK RR  + EV +P
Sbjct: 31  KQTYNKFSIMGEFAPVAIIGGFVGLAVLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDP 90

Query: 112 EHVAEETEKLFAKSFFRKVAHVQELEKFRDYSVPYDPLLGDAYANRHRTETLRSVGIDP 171
           E+     +K   KS+ RKV  +Q+  K    ++  DP   + +      ETL SVG+ P
Sbjct: 91  ENCVSSADKFINKSWLRKVGQIQDKSK----AILSDPTRPNPFTTPRNAETLNSVGVAP 145

The following BLAST results are available for this feature:

BLAST of Tan0004884 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0004884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877441.1	1.4e-79	88.44	uncharacterized protein LOC120069725 [Benincasa hispida]	[more]
XP_022945500.1	5.3e-76	86.13	uncharacterized protein LOC111449717 [Cucurbita moschata] >KAG6574202.1 hypothet...	[more]
XP_023542210.1	1.0e-74	84.97	uncharacterized protein LOC111802176 [Cucurbita pepo subsp. pepo]	[more]
XP_022968331.1	1.5e-73	84.39	uncharacterized protein LOC111467595 [Cucurbita maxima]	[more]
XP_008439275.1	4.0e-71	83.24	PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo] >KAA0033690.1 unc...	[more]

BLAST of Tan0004884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G139	2.6e-76	86.13	uncharacterized protein LOC111449717 OS=Cucurbita moschata OX=3662 GN=LOC1114497...	[more]
A0A6J1HUK3	7.0e-74	84.39	uncharacterized protein LOC111467595 OS=Cucurbita maxima OX=3661 GN=LOC111467595...	[more]
A0A5D3DHE3	1.9e-71	83.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZ27	1.9e-71	83.24	uncharacterized protein LOC103484107 OS=Cucumis melo OX=3656 GN=LOC103484107 PE=...	[more]
A0A0A0L610	8.0e-70	81.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183970 PE=4 SV=1	[more]

BLAST of Tan0004884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07330.1	1.1e-23	40.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G63060.1	1.9e-15	36.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 12..171
None	No IPR available	PANTHER	PTHR33919:SF11	PROTEIN, PUTATIVE-RELATED	coord: 12..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004884.1	Tan0004884.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane