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Tan0004761 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAATTAAAATTAAAAAGCAAAAAGAAAAAAAAAAAAAGGGTTGAATTGAAGCGACTGGCCGGTAAAGAAGACGATAAGAAGAAGAAGAAGATCAGTGTGGGAGTGGGCAATTATGGTTAGCGAATCAAGATTTCATACGTAAAATCCTCTTTCTCTCTCTTCTGCAATAACATGGCCATGGAATCCTATTAAACTCTCCTAATTCCCTCTCCTTCTTCTTCCCCCTTTTTCTCCTCTGTTTCCATTCACAATTCTTAATAATTCCCCCAAATGGAGAATCCGCCGCCGTCCGATTTCGCCGCTCACCTTCCGATTCACAGCCAGGTTGTGAAGATCAAGAGGGAGATCGAGAAGATCAACCATCCTTCTCTTCAGCAATCCGACATGTCGACTCATCTTCTTCTTCGCGACTTGTCGATTTCCAAGCCGCGATCTCGCTCCCCGCTAGGGCTCGCTGCCGACAGGCCTATTTCCGTCGGCAATTAATTAAATTACGGCCGGATTTTGATCAGGTCGGTATCTCTAGCCATCATATCCGAATTAATCTCTTCTCCCTCTTCTAAAACCCTAGATTCTTGTTTGAATCGGTTGTACAAGTACATAGTTTTGTTCTAGGATTTCGAACCTTAATGGATATGGCGGAATTTCTTCTTCTTCTTCGTCTAATTTCTTCTCTCTGCAATTCTCTCTTCTTGAAGGATTTCATTAACCAATTTCTTTCTCTGTCTGCAAAAGAATTCAACTCTGCTATTTCGATTCAATTTGCTTATTATTA TTTGAATTAAAATTAAAAAGCAAAAAGAAAAAAAAAAAAAGGGTTGAATTGAAGCGACTGGCCGGTAAAGAAGACGATAAGAAGAAGAAGAAGATCAGTGTGGGAGTGGGCAATTATGGTTAGCGAATCAAGATTTCATACGTAAAATCCTCTTTCTCTCTCTTCTGCAATAACATGGCCATGGAATCCTATTAAACTCTCCTAATTCCCTCTCCTTCTTCTTCCCCCTTTTTCTCCTCTGTTTCCATTCACAATTCTTAATAATTCCCCCAAATGGAGAATCCGCCGCCGTCCGATTTCGCCGCTCACCTTCCGATTCACAGCCAGGTTGTGAAGATCAAGAGGGAGATCGAGAAGATCAACCATCCTTCTCTTCAGCAATCCGACATGTCGACTCATCTTCTTCTTCGCGACTTGTCGATTTCCAAGCCGCGATCTCGCTCCCCGCTAGGGCTCGCTGCCGACAGGCCTATTTCCGTCGGCAATTAATTAAATTACGGCCGGATTTTGATCAGGTCGGTATCTCTAGCCATCATATCCGAATTAATCTCTTCTCCCTCTTCTAAAACCCTAGATTCTTGTTTGAATCGGTTGTACAAGTACATAGTTTTGTTCTAGGATTTCGAACCTTAATGGATATGGCGGAATTTCTTCTTCTTCTTCGTCTAATTTCTTCTCTCTGCAATTCTCTCTTCTTGAAGGATTTCATTAACCAATTTCTTTCTCTGTCTGCAAAAGAATTCAACTCTGCTATTTCGATTCAATTTGCTTATTATTA ATGGAGAATCCGCCGCCGTCCGATTTCGCCGCTCACCTTCCGATTCACAGCCAGGTTGTGAAGATCAAGAGGGAGATCGAGAAGATCAACCATCCTTCTCTTCAGCAATCCGACATGTCGACTCATCTTCTTCTTCGCGACTTGTCGATTTCCAAGCCGCGATCTCGCTCCCCGCTAGGGCTCGCTGCCGACAGGCCTATTTCCGTCGGCAATTAA MENPPPSDFAAHLPIHSQVVKIKREIEKINHPSLQQSDMSTHLLLRDLSISKPRSRSPLGLAADRPISVGN Homology
BLAST of Tan0004761 vs. NCBI nr
Match: XP_038875254.1 (uncharacterized protein LOC120067758 [Benincasa hispida]) HSP 1 Score: 104.4 bits (259), Expect = 4.2e-19 Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of Tan0004761 vs. NCBI nr
Match: XP_023511992.1 (uncharacterized protein LOC111776834 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18 Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of Tan0004761 vs. NCBI nr
Match: XP_022146403.1 (uncharacterized protein LOC111015628 [Momordica charantia]) HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18 Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of Tan0004761 vs. NCBI nr
Match: XP_023523054.1 (uncharacterized protein LOC111787191 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.3 bits (251), Expect = 3.6e-18 Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of Tan0004761 vs. NCBI nr
Match: XP_022921910.1 (uncharacterized protein LOC111430025 isoform X2 [Cucurbita moschata]) HSP 1 Score: 100.9 bits (250), Expect = 4.6e-18 Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Tan0004761 vs. ExPASy TrEMBL
Match: A0A6J1CYH4 (uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015628 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18 Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of Tan0004761 vs. ExPASy TrEMBL
Match: A0A0A0KPB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561250 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18 Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Tan0004761 vs. ExPASy TrEMBL
Match: A0A6J1E741 (uncharacterized protein LOC111430025 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18 Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Tan0004761 vs. ExPASy TrEMBL
Match: A0A6J1E1V2 (uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18 Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Tan0004761 vs. ExPASy TrEMBL
Match: A0A6J1JSC7 (uncharacterized protein LOC111487401 OS=Cucurbita maxima OX=3661 GN=LOC111487401 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.0e-18 Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of Tan0004761 vs. TAIR 10
Match: AT1G24600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 7.2e-09 Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Tan0004761 vs. TAIR 10
Match: AT1G67920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 1.8e-07 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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