Tan0004756 (gene) Snake gourd v1

Overview


Name	Tan0004756
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	LG07: 12221282 .. 12222066 (-)
RNA-Seq Expression	Tan0004756
Synteny	Tan0004756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCGATCCGATCGTTCGTTTACAGAGAAGGAGCGGTTTATCGGTGGCAAGGATTTTTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCCTTCATTTCCAAGCTTCTTCCACCTTCCGACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTAACTTTTCTGTTGATTTTGGGAAGTTCCTTTATTTGTGTTGTGGAACCCTAAGCATTTGGAAGGATTGGAAATCATTTTAAATGAAAGTTAATCTCATTCCAATTTGACCCTGCTTTAGAATTGGTTGAATTGAAGAAAAAGAAAAATTGATTCGTGAAACGTGATTGAGAGATGGAGGGGATTGTGGAAGATTGAGAGGAAGATGGGAAGAAGAAGGAAAAATAGGAGGGAGAAGAAAGAAAGGGTGGGGGGAAAAAGAGGAAGAAGAATAGGAGTTAGGGTTTTTTTTTCCTTTCATTATTAAATTGTTTCTTATTTTCTAAAACATCACACACTTGTTCAAAGGACATTTTCATGAAAGTTGATTTAGTGATACTGCCTTTGATCTCTTGAAAAGATTGCTTGAAACCAAACTATCACAACTTCAAGGAAACTAATCTGATAACTTGTTTCTTTGGCTACTATTGATTAACAATGACCCCATTTTGTAATGCATTTCCTCTTCTTTATATTAGGTATTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTCAGCATGAAACTGTTCAAGCATGCTTGA

mRNA sequence

ATGAGTTCGATCCGATCGTTCGTTTACAGAGAAGGAGCGGTTTATCGGTGGCAAGGATTTTTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCCTTCATTTCCAAGCTTCTTCCACCTTCCGACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTATTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTCAGCATGAAACTGTTCAAGCATGCTTGA

Coding sequence (CDS)

ATGAGTTCGATCCGATCGTTCGTTTACAGAGAAGGAGCGGTTTATCGGTGGCAAGGATTTTTGTTCATCGTCGTCAGCTTCGTTTTCCTTCTGCTATTTCTCTATGCCGCCTTCATTTCCAAGCTTCTTCCACCTTCCGACAACGCCTTCTTATCTGCTATTCAGAACGACTGGTATTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTCAGCATGAAACTGTTCAAGCATGCTTGA

Protein sequence

MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYYCLLVPLTLPILYVAVYFHWLSMKLFKHA

Homology

[Close]

BLAST of Tan0004756 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 80/88 (90.91%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          MSSIRSFV RE A YRWQGF+FIVVSFVFLLLFLYAA ISKLL PSDNAFLSAIQ DWYY
Sbjct: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 67 CLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of Tan0004756 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 143.7 bits (361), Expect = 7.7e-31
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          MSSIRS + RE AV R QGF F+V+SF  LL+FLYAA ISKLLPPS+NAFLSAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Tan0004756 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 113.6 bits (283), Expect = 8.6e-22
Identity = 59/88 (67.05%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          M ++R FV   G ++ W  F  I  SF F + FLYAA +SKLLPPSDN+ + AIQNDWYY
Sbjct: 1  MLALREFVDSNGRIF-WGWFFLIFGSFSF-VFFLYAAVVSKLLPPSDNSVIQAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          C LVPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Tan0004756 vs. NCBI nr
Match: PIN13861.1 (hypothetical protein CDL12_13514 [Handroanthus impetiginosus])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 61/88 (69.32%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          M S+R F+   G V+ W  F  I+ SF F L FLYAA ISKL PPSDN  + AIQNDWYY
Sbjct: 5  MLSLRDFLVSNGKVF-WGWFFIIIGSFSF-LTFLYAAVISKLQPPSDNVVIRAIQNDWYY 64

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          C LVPLTLPIL VAVYFHWLSMKLFKHA
Sbjct: 65 CFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Tan0004756 vs. NCBI nr
Match: GFQ03170.1 (hypothetical protein PHJA_002460800 [Phtheirospermum japonicum])

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          M  ++ F+   G ++ W  F  I  SF F + FLYAA ISKL PPSDNA + AIQNDWYY
Sbjct: 1  MLGLKQFIASNGRMF-WGWFFLITGSFSF-VCFLYAAVISKLQPPSDNAIIRAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          C LVPLTLPIL ++VYFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILVISVYFHWLSMKLFKHA 86

[Close]

BLAST of Tan0004756 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.8e-32
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          MSSIRS + RE  V R QG LF+VVSF+FLL+FLYAAFISKLLPPS+NAFLSAIQNDW+Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Tan0004756 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          MSSIRS + RE AV R QGF F+V+SF  LL+FLYAA ISKLLPPS+NAFLSAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Tan0004756 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-22
Identity = 59/88 (67.05%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          M ++R FV   G ++ W  F  I  SF F + FLYAA +SKLLPPSDN+ + AIQNDWYY
Sbjct: 1  MLALREFVDSNGRIF-WGWFFLIFGSFSF-VFFLYAAVVSKLLPPSDNSVIQAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          C LVPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Tan0004756 vs. ExPASy TrEMBL
Match: A0A2G9H8L1 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.1e-22
Identity = 61/88 (69.32%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1  MSSIRSFVYREGAVYRWQGFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYY 60
          M S+R F+   G V+ W  F  I+ SF F L FLYAA ISKL PPSDN  + AIQNDWYY
Sbjct: 5  MLSLRDFLVSNGKVF-WGWFFIIIGSFSF-LTFLYAAVISKLQPPSDNVVIRAIQNDWYY 64

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          C LVPLTLPIL VAVYFHWLSMKLFKHA
Sbjct: 65 CFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Tan0004756 vs. ExPASy TrEMBL
Match: A0A7N0RIH6 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 19 GFLFIVVSFVFLLLFLYAAFISKLLPPSDNAFLSAIQNDWYYCLLVPLTLPILYVAVYFH 78
          G + +    +FLL F+YAA ISKLLPPSDN  +SAIQNDWYYC LVPLTLPIL VAVYFH
Sbjct: 18 GLILVGFGILFLLGFIYAAIISKLLPPSDNVIISAIQNDWYYCFLVPLTLPILVVAVYFH 77

Query: 79 WLSMKLFKHA 89
          WLSMKLFKHA
Sbjct: 78 WLSMKLFKHA 87

The following BLAST results are available for this feature:

BLAST of Tan0004756 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0004756 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605922.1	1.5e-34	90.91	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ADN33919.1	7.7e-31	84.09	hypothetical protein [Cucumis melo subsp. melo]	[more]
EYU17719.1	8.6e-22	67.05	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
PIN13861.1	1.5e-21	69.32	hypothetical protein CDL12_13514 [Handroanthus impetiginosus]	[more]
GFQ03170.1	6.1e-20	63.64	hypothetical protein PHJA_002460800 [Phtheirospermum japonicum]	[more]

BLAST of Tan0004756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIB0	5.8e-32	85.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
E5GBS7	3.7e-31	84.09	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A022PQH2	4.2e-22	67.05	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]
A0A2G9H8L1	7.1e-22	69.32	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 P...	[more]
A0A7N0RIH6	2.3e-20	75.71	Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1	[more]

BLAST of Tan0004756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 19..87 e-value: 2.3E-17 score: 63.7
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 17..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004756.1	Tan0004756.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0016757	glycosyltransferase activity
molecular_function	GO:0016491	oxidoreductase activity