Tan0004684 (gene) Snake gourd v1

Overview


Name	Tan0004684
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	17.5 kDa class I heat shock protein-like
Location	LG08: 74388182 .. 74389100 (+)
RNA-Seq Expression	Tan0004684
Synteny	Tan0004684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGAAGCCCAGAAGGTTCGTCCATGACTGAAGGCGAAGATATTTTATGAGAGAAATTTCCAGAGAAACCCAGAATCTTCGGCTAGTCACTAATTCCCGCCTCTTTAACTTTGCTCACCAATCAGAAACTCCAAACTAAAAGTTATTCTCTGATAATCGTTCAGTTCAATCGAAGCGCCTCTAAATCTCAATTTCAATCGCCGATTCAACTCGTTTTTCCATTTCTTCAATTGTAAACTCAGAAGATGTCGTTGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAACATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCAATTTCTCAAGAAACTTCCGCTCTGATGAACGCTCGTGTAGACTGGAAGGAGACGCCAGAGGCTCATGTTATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGACGGAAAAGTGCTTCAGATCAGCGGCGAAAGGAGCGTCGAGAAAGAGGAGAAGAACGAGAAATGGCATCGGATCGATCGAAGCAGTGGAAAGTTCCAGAGGAGATTCAGGCTGCCGGAGGATGCGAAAATGGAGGAAATTAAGGCATCCATGGATAACGGAGTTCTTACTGTGACGGTGCCGAAGGCGGAAGAAAAGAAAACGGATGTGAAGTCCGTTGAAATTTCTGGCTGAAGGATTGAATATTTGGATTTTGTGGTGTGTCACTACTAAGCGTTGGTTTTGATCATATAAACTTATGAATATATGTAAATTGTCTTTCTGAGTTTGAATATGTAAAGAAATAGTTTTCTTTTCTAAATTATTAGTTTTTCTTTTAGTTCTTGGAACCTCTAATTCAAGAAAACAATAATAAATGCTCAATTCGAGCATGGGTACTAATACTATTA

mRNA sequence

CCGGAAGCCCAGAAGGTTCGTCCATGACTGAAGGCGAAGATATTTTATGAGAGAAATTTCCAGAGAAACCCAGAATCTTCGGCTAGTCACTAATTCCCGCCTCTTTAACTTTGCTCACCAATCAGAAACTCCAAACTAAAAGTTATTCTCTGATAATCGTTCAGTTCAATCGAAGCGCCTCTAAATCTCAATTTCAATCGCCGATTCAACTCGTTTTTCCATTTCTTCAATTGTAAACTCAGAAGATGTCGTTGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAACATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCAATTTCTCAAGAAACTTCCGCTCTGATGAACGCTCGTGTAGACTGGAAGGAGACGCCAGAGGCTCATGTTATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGACGGAAAAGTGCTTCAGATCAGCGGCGAAAGGAGCGTCGAGAAAGAGGAGAAGAACGAGAAATGGCATCGGATCGATCGAAGCAGTGGAAAGTTCCAGAGGAGATTCAGGCTGCCGGAGGATGCGAAAATGGAGGAAATTAAGGCATCCATGGATAACGGAGTTCTTACTGTGACGGTGCCGAAGGCGGAAGAAAAGAAAACGGATGTGAAGTCCGTTGAAATTTCTGGCTGAAGGATTGAATATTTGGATTTTGTGGTGTGTCACTACTAAGCGTTGGTTTTGATCATATAAACTTATGAATATATGTAAATTGTCTTTCTGAGTTTGAATATGTAAAGAAATAGTTTTCTTTTCTAAATTATTAGTTTTTCTTTTAGTTCTTGGAACCTCTAATTCAAGAAAACAATAATAAATGCTCAATTCGAGCATGGGTACTAATACTATTA

Coding sequence (CDS)

ATGTCGTTGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAACATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCAATTTCTCAAGAAACTTCCGCTCTGATGAACGCTCGTGTAGACTGGAAGGAGACGCCAGAGGCTCATGTTATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGACGGAAAAGTGCTTCAGATCAGCGGCGAAAGGAGCGTCGAGAAAGAGGAGAAGAACGAGAAATGGCATCGGATCGATCGAAGCAGTGGAAAGTTCCAGAGGAGATTCAGGCTGCCGGAGGATGCGAAAATGGAGGAAATTAAGGCATCCATGGATAACGGAGTTCTTACTGTGACGGTGCCGAAGGCGGAAGAAAAGAAAACGGATGTGAAGTCCGTTGAAATTTCTGGCTGA

Protein sequence

MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPSISQETSALMNARVDWKETPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG

Homology

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BLAST of Tan0004684 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.0e-58
Identity = 114/154 (74.03%), Postives = 136/154 (88.31%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPF-DFHFP-SISQETSALMNARVDWKETPEAHVM 60
           MSLIPS FGGRRSN+FDPF + D+ DPF DFHFP S+S E SA +N RVDWKETPEAHV 
Sbjct: 1   MSLIPSIFGGRRSNVFDPF-SLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVF 60

Query: 61  KADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDAK 120
           +AD+PGLKKEEVKV+IED +VLQISGER++EKE+KN+ WHR++RSSG F RRFRLPE+AK
Sbjct: 61  EADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAK 120

Query: 121 MEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           +E++KASM+NGVLTVTVPK E KK DVK++EISG
Sbjct: 121 VEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

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BLAST of Tan0004684 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.0e-58
Identity = 115/155 (74.19%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPF-DFHFP--SISQETSALMNARVDWKETPEAHV 60
           MSLIP FFGGRRSN+FDPF + D+ DPF DFH P  S+S E SA ++ RVDWKETPEAHV
Sbjct: 1   MSLIPGFFGGRRSNVFDPF-SLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHV 60

Query: 61  MKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDA 120
            KAD+PGLKKEEVKV+IED +VLQISGER+VEKE+KN+ WHR++RSSGKF RRFRLPE+A
Sbjct: 61  FKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENA 120

Query: 121 KMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           K+ E+KASM+NGVLTVTVPK E KK DVK++EISG
Sbjct: 121 KVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of Tan0004684 vs. ExPASy Swiss-Prot
Match: P04795 (17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-57
Identity = 113/155 (72.90%), Postives = 134/155 (86.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPF-DFHFP--SISQETSALMNARVDWKETPEAHV 60
           MSLIPS FGG RSN+FDPF + D+ DPF DFH P  S+S E SA +N RVDWKET EAHV
Sbjct: 1   MSLIPSIFGGPRSNVFDPF-SLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHV 60

Query: 61  MKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDA 120
           +KAD+PGLKKEEVKV+IED +VLQISGER+VEKE+KN+ WHR+DRSSGKF RRFRLPE+A
Sbjct: 61  LKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENA 120

Query: 121 KMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           K+E++KA M+NGVLTVT+PK E KK+DVK +EISG
Sbjct: 121 KVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154

[Close]

BLAST of Tan0004684 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-56
Identity = 114/162 (70.37%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPF-DF---------HFPSISQETSALMNARVDWK 60
           MSLIP+FFGGRR+N+FDPF + D+ DPF DF          FP  S+E SA ++ RVDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPF-SLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED KVLQISGER+VEKE+KN+ WHR++RSSGKF RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           FRLPE+AK+E++KASM+NGVLTVTVPK E KK DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Tan0004684 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-56
Identity = 112/154 (72.73%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPF-DFHFP-SISQETSALMNARVDWKETPEAHVM 60
           MSLIPSFFGGRRS++FDPF + D+ DPF DF FP S+S E SA ++ RVDWKETPEAHV 
Sbjct: 1   MSLIPSFFGGRRSSVFDPF-SLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVF 60

Query: 61  KADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDAK 120
           KAD+PGLKKEEVK+EI+DG+VLQISGER+VEKE+KN+ WHR++RSSGK  RRFRLPE+AK
Sbjct: 61  KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAK 120

Query: 121 MEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           ++++KASM+NGVLTVTVPK E KK DVK+++ISG
Sbjct: 121 VDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

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BLAST of Tan0004684 vs. NCBI nr
Match: XP_023522675.1 (17.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 140/160 (87.50%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRSNI+DPFATFDLSDPFDFHFPS        +S+ETSALMN RVDWKET
Sbjct: 1   MSMIPSFFGGRRSNIYDPFATFDLSDPFDFHFPSSILTQVPEVSRETSALMNTRVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHVMKADLPG+KKEEVKVEIEDGKVLQISGERSVEKE KNE WHRI+RS GKFQRRFR
Sbjct: 61  PEAHVMKADLPGMKKEEVKVEIEDGKVLQISGERSVEKENKNETWHRIERSCGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LPEDAKMEEI+ASM+NGVLTVTVPKAEEKKTDVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEEKKTDVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 271.6 bits (693), Expect = 4.2e-69
Identity = 135/160 (84.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRS++FDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVE+EDGKV+QISGERS+EKE+KNEKWHRI+RSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LPEDAKMEEI+ASM+NGVLTVTVPKAE+KKTDVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of Tan0004684 vs. NCBI nr
Match: KAG6607283.1 (18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRSNI+DPFATFDLSDPFDFHFPS        IS+ETSALMN RVDWKET
Sbjct: 1   MSMIPSFFGGRRSNIYDPFATFDLSDPFDFHFPSSILTQVPEISRETSALMNTRVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKE KNE WHRI+RS GKFQRRFR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKENKNETWHRIERSCGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LP DAKMEEI+ASM+NGVLTVTVPKA+EKKTDVKSVEISG
Sbjct: 121 LPVDAKMEEIRASMENGVLTVTVPKADEKKTDVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. NCBI nr
Match: XP_022949249.1 (17.5 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRSNI+DPFATFDLSDPFDFHFPS        IS+ETSALMN RVDWKET
Sbjct: 1   MSMIPSFFGGRRSNIYDPFATFDLSDPFDFHFPSSILTQVPEISRETSALMNTRVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKE KNE WHRI+RS GKFQRRFR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKESKNETWHRIERSCGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LP DAKMEEI+ASM+NGVLTVTVPKA+EKKTDVKSVEISG
Sbjct: 121 LPVDAKMEEIRASMENGVLTVTVPKADEKKTDVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 6.1e-68
Identity = 134/160 (83.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRS++FDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISGERSVEKE+KNEKWHR++RSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           +PED KMEEI+ASM+NGVLTVTVPKAEEKK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. ExPASy TrEMBL
Match: H6TB43 (HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 135/160 (84.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRS++FDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVE+EDGKV+QISGERS+EKE+KNEKWHRI+RSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LPEDAKMEEI+ASM+NGVLTVTVPKAE+KKTDVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of Tan0004684 vs. ExPASy TrEMBL
Match: A0A6J1GCA7 (17.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111452660 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRSNI+DPFATFDLSDPFDFHFPS        IS+ETSALMN RVDWKET
Sbjct: 1   MSMIPSFFGGRRSNIYDPFATFDLSDPFDFHFPSSILTQVPEISRETSALMNTRVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKE KNE WHRI+RS GKFQRRFR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKESKNETWHRIERSCGKFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LP DAKMEEI+ASM+NGVLTVTVPKA+EKKTDVKSVEISG
Sbjct: 121 LPVDAKMEEIRASMENGVLTVTVPKADEKKTDVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 134/160 (83.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRS++FDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISGERSVEKE+KNEKWHR++RSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           +PED KMEEI+ASM+NGVLTVTVPKAEEKK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 134/160 (83.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGGRRS++FDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISGERSVEKE+KNEKWHR++RSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           +PED KMEEI+ASM+NGVLTVTVPKAEEKK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. ExPASy TrEMBL
Match: A0A6J1HK86 (18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111464867 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 135/160 (84.38%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHFPS--------ISQETSALMNARVDWKET 60
           MS+IPSFFGG+RS+IFDPFATFDLSDPFDFHFPS        I++ETSA++NARVDWKET
Sbjct: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISGER VEKEEKNEKWHR++RSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LPEDAKMEEI+ASM+NGVLTVTVPKAEE+K DVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 160

[Close]

BLAST of Tan0004684 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 217.2 bits (552), Expect = 8.9e-57
Identity = 113/160 (70.62%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFDFHF--------PSISQETSALMNARVDWKET 60
           MSLIPS FGGRRSN+FDPF+  DL DPF+  F         S +++ +A  NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  VLQISGERS E EEKN+KWHR++R+SGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           LPE+AKMEE+KA+M+NGVLTV VPKA EKK  VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Tan0004684 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 7.5e-56
Identity = 111/158 (70.25%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFD-FHFPS-----ISQETSALMNARVDWKETPE 60
           MSLIPS FGGRR+N+FDPF + D+ DPF+ F  PS      + + +A  NA+VDW+ETPE
Sbjct: 1   MSLIPSIFGGRRTNVFDPF-SLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPE 60

Query: 61  AHVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLP 120
           AHV KADLPGL+KEEVKVE+EDG +LQISGERS E EEKN+KWHR++RSSGKF RRFRLP
Sbjct: 61  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLP 120

Query: 121 EDAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           E+AKMEEIKASM+NGVL+VTVPK  EKK +VKS++ISG
Sbjct: 121 ENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Tan0004684 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 211.1 bits (536), Expect = 6.3e-55
Identity = 106/157 (67.52%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MSLIPSFFGGRRSNIFDPFATFDLSDPFD-FHFPSI----SQETSALMNARVDWKETPEA 60
           MSL+PSFFGGRR+N+FDPF + D+ DPF+ F  P +    +++ +A  NA+VDW+ETPEA
Sbjct: 1   MSLVPSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HVMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPE 120
           HV KAD+PGLKKEEVKVE+EDG +LQISGERS E EEK++ WHR++RSSGKF RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 DAKMEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           +AK+EE+KASM+NGVL+VTVPK +E K +VKSV+ISG
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Tan0004684 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 8.3e-55
Identity = 109/154 (70.78%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MSLIPSFF-GGRRSNIFDPFATFDLSDPF-DFHFPSISQETSALMNARVDWKETPEAHVM 60
           MS+IPSFF   RRSNIFDPF + D+ DPF +    S+S+E SA++NARVDW+ETPEAHV 
Sbjct: 1   MSMIPSFFNNNRRSNIFDPF-SLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVF 60

Query: 61  KADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPEDAK 120
           KADLPGLKKEEVKVEIE+  VL+ISGER VEKE+KN+ WHR++RSSG+F RRFRLPE+ K
Sbjct: 61  KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVK 120

Query: 121 MEEIKASMDNGVLTVTVPKAEEKKTDVKSVEISG 153
           M+++KA+M+NGVLTVTVPKAE KK DVKS++ISG
Sbjct: 121 MDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Tan0004684 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 112/158 (70.89%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 1   MSLIPSFFG-GRRSN-IFDPFATFDLSDPF-DFHFP-SISQETSALMNARVDWKETPEAH 60
           MSLIPSFFG  RRSN IFDPF + D+ DPF +  FP S+S ETSA+ NARVDWKET EAH
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPF-SLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAH 60

Query: 61  VMKADLPGLKKEEVKVEIEDGKVLQISGERSVEKEEKNEKWHRIDRSSGKFQRRFRLPED 120
           V KADLPG+KKEEVKVEIED  VL+ISGER VEKEEK + WHR++RSSG+F R+F+LPE+
Sbjct: 61  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 120

Query: 121 AKMEEIKASMDNGVLTVTVPKAEE--KKTDVKSVEISG 153
            KM+++KASM+NGVLTVTVPK EE  KK  VKS++ISG
Sbjct: 121 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Tan0004684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04793	6.0e-58	74.03	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P04794	6.0e-58	74.19	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]
P04795	6.6e-57	72.90	17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=...	[more]
P05478	1.1e-56	70.37	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P02519	1.9e-56	72.73	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]

BLAST of Tan0004684 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522675.1	1.1e-69	87.50	17.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
ADU55790.1	4.2e-69	84.38	HSP18.2A [Citrullus lanatus]	[more]
KAG6607283.1	7.2e-69	87.50	18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022949249.1	7.2e-69	87.50	17.5 kDa class I heat shock protein-like [Cucurbita moschata]	[more]
XP_008457420.1	6.1e-68	83.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]

BLAST of Tan0004684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB43	2.1e-69	84.38	HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1GCA7	3.5e-69	87.50	17.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3BFY1	3.0e-68	83.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	3.0e-68	83.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]
A0A6J1HK86	1.1e-67	84.38	18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Tan0004684 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	8.9e-57	70.63	heat shock protein 18.2	[more]
AT1G53540.1	7.5e-56	70.25	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	6.3e-55	67.52	heat shock protein 17.4	[more]
AT2G29500.1	8.3e-55	70.78	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.9e-52	70.89	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 48..151 e-value: 1.0E-30 score: 105.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 38..152 score: 31.883841
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..152 e-value: 4.2E-49 score: 168.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 19..152
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..152
None	No IPR available	PANTHER	PTHR11527:SF319	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..152
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 46..137 e-value: 4.31735E-54 score: 163.63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004684.1	Tan0004684.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding