Tan0004574 (gene) Snake gourd v1

Overview
NameTan0004574
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG01: 90680689 .. 90681219 (-)
RNA-Seq ExpressionTan0004574
SyntenyTan0004574
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGGGACTGAAGAGTCATAGTGATGTGACATGGTTGTGTTCATCAGAATTACCTAAATCGTTGAATGAGCCTTCAGAGGCTATAGTTTCCCAACAATCGCCAACTAGTCAGCCACATAAAACTTTGGTGGGAAGTCCAAAGCGTGTTGAGCTAGTTGGTATTGATCAGTCCCACCCTGACTCACCTGATTGGAGAAGCTTGAACAGAAATTCTGATGTTCCTAAGGAATTTGGAGGAAATAAACATGAAGTTGAATTAAGAAACATAATGGAAATTGAATTAGCTGGGGAGATTACAGAAGCCCCTTTGAGTTTTCTAGGTAAGTTCCATCCACCAGATCTCAATAAAACGATGAGTATGGATCTTAACATTCATTCTCTAGATACTCCCTTAGTGTTTTCAGTAGTCGGTGGCTACATTAGTCCATCTAGAATTAAAGGAAAGAGAAAGTACGACTCTAAGTCAAAACAAGAGACCAAAAGCAAACTTATGTCAACTGGTACCTCCTTGGAAGAAGAGGAGTAG

mRNA sequence

ATGGGTTTGGGACTGAAGAGTCATAGTGATGTGACATGGTTGTGTTCATCAGAATTACCTAAATCGTTGAATGAGCCTTCAGAGGCTATAGTTTCCCAACAATCGCCAACTAGTCAGCCACATAAAACTTTGGTGGGAAGTCCAAAGCGTGTTGAGCTAGTTGGTATTGATCAGTCCCACCCTGACTCACCTGATTGGAGAAGCTTGAACAGAAATTCTGATGTTCCTAAGGAATTTGGAGGAAATAAACATGAAGTTGAATTAAGAAACATAATGGAAATTGAATTAGCTGGGGAGATTACAGAAGCCCCTTTGAGTTTTCTAGTAGTCGGTGGCTACATTAGTCCATCTAGAATTAAAGGAAAGAGAAAGTACGACTCTAAGTCAAAACAAGAGACCAAAAGCAAACTTATGTCAACTGGTACCTCCTTGGAAGAAGAGGAGTAG

Coding sequence (CDS)

ATGGGTTTGGGACTGAAGAGTCATAGTGATGTGACATGGTTGTGTTCATCAGAATTACCTAAATCGTTGAATGAGCCTTCAGAGGCTATAGTTTCCCAACAATCGCCAACTAGTCAGCCACATAAAACTTTGGTGGGAAGTCCAAAGCGTGTTGAGCTAGTTGGTATTGATCAGTCCCACCCTGACTCACCTGATTGGAGAAGCTTGAACAGAAATTCTGATGTTCCTAAGGAATTTGGAGGAAATAAACATGAAGTTGAATTAAGAAACATAATGGAAATTGAATTAGCTGGGGAGATTACAGAAGCCCCTTTGAGTTTTCTAGTAGTCGGTGGCTACATTAGTCCATCTAGAATTAAAGGAAAGAGAAAGTACGACTCTAAGTCAAAACAAGAGACCAAAAGCAAACTTATGTCAACTGGTACCTCCTTGGAAGAAGAGGAGTAG

Protein sequence

MGLGLKSHSDVTWLCSSELPKSLNEPSEAIVSQQSPTSQPHKTLVGSPKRVELVGIDQSHPDSPDWRSLNRNSDVPKEFGGNKHEVELRNIMEIELAGEITEAPLSFLVVGGYISPSRIKGKRKYDSKSKQETKSKLMSTGTSLEEEE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004574.1Tan0004574.1mRNA