Tan0004451 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACCCTAAAAGAAGAGGACAAGATTTCTGGTCTTAGGTTTACACATCAGTCATTTTGGTTTGAAATTCATGATACCCAAATGAATTACATGACTGTAGAGATGGCTAAATTATTGGGAAAAGAAGTTGGATTGGTAGAGGAAGTCGATTGGAATGGGGAAGATAAGTGGTTAGGACCCTTTTTACGTATTCGAGTACTGTTAAACATTACGATCCCGTTGATGAAAGAGTTGAAGCTAAAAACTGCATATGTTAAGGAGATTTGGTGTCCTATTAGATATGAAAAGTTATCGGATTATTGTTTCAATTGTGGAATCATTGGTCACTCAATCAAGGAATCCCGAGTTCATTCGATGAGGTTAGTGAAGTCAAACAGTTGGAGTATGGAGATAGGATTAGAGTTATGGTTATCAAGAAAAACCTTAATGAGAATGATGATGATTACTTATCTAGAGTGGGTGGTCAAGGAAGAAGCAATAAAGAAAGAGGAGGATTTAGGGGAAGGGGTGGTATACTAG ATGAAAACCCTAAAAGAAGAGGACAAGATTTCTGGTCTTAGGTTTACACATCAGTCATTTTGGTTTGAAATTCATGATACCCAAATGAATTACATGACTGTAGAGATGGCTAAATTATTGGGAAAAGAAGTTGGATTGGTAGAGGAAGTCGATTGGAATGGGGAAGATAAGTGGTTAGGACCCTTTTTACGTATTCGAGTACTGTTAAACATTACGATCCCGTTGATGAAAGAGTTGAAGCTAAAAACTGCATATGTTAAGGAGATTTGGTGTCCTATTAGATATGAAAAGTTATCGGATTATTGTTTCAATTGTGGAATCATTGGTCACTCAATCAAGGAATCCCGAGTTCATTCGATGAGGTTAGTGAAGTCAAACAGTTGGAGTATGGAGATAGGATTAGAGTTATGGTTATCAAGAAAAACCTTAATGAGAATGATGATGATTACTTATCTAGAGTGGGTGGTCAAGGAAGAAGCAATAAAGAAAGAGGAGGATTTAGGGGAAGGGGTGGTATACTAG ATGAAAACCCTAAAAGAAGAGGACAAGATTTCTGGTCTTAGGTTTACACATCAGTCATTTTGGTTTGAAATTCATGATACCCAAATGAATTACATGACTGTAGAGATGGCTAAATTATTGGGAAAAGAAGTTGGATTGGTAGAGGAAGTCGATTGGAATGGGGAAGATAAGTGGTTAGGACCCTTTTTACGTATTCGAGTACTGTTAAACATTACGATCCCGTTGATGAAAGAGTTGAAGCTAAAAACTGCATATGTTAAGGAGATTTGGTGTCCTATTAGATATGAAAAGTTATCGGATTATTGTTTCAATTGTGGAATCATTGGTCACTCAATCAAGGAATCCCGAGTTCATTCGATGAGGTTAGTGAAGTCAAACAGTTGGAGTATGGAGATAGGATTAGAGTTATGGTTATCAAGAAAAACCTTAATGAGAATGATGATGATTACTTATCTAGAGTGGGTGGTCAAGGAAGAAGCAATAAAGAAAGAGGAGGATTTAGGGGAAGGGGTGGTATACTAG MKTLKEEDKISGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKESRVHSMRLVKSNSWSMEIGLELWLSRKTLMRMMMITYLEWVVKEEAIKKEEDLGEGVVY Homology
BLAST of Tan0004451 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 118.2 bits (295), Expect = 6.8e-23 Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Tan0004451 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia]) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Tan0004451 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis]) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-16 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of Tan0004451 vs. NCBI nr
Match: XP_006484927.1 (uncharacterized protein LOC102626623 [Citrus sinensis]) HSP 1 Score: 91.3 bits (225), Expect = 9.0e-15 Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Tan0004451 vs. NCBI nr
Match: KAG5547197.1 (hypothetical protein RHGRI_013014 [Rhododendron griersonianum]) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-14 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Tan0004451 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.3e-23 Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Tan0004451 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.3e-21 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Tan0004451 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.6e-17 Identity = 40/117 (34.19%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Tan0004451 vs. ExPASy TrEMBL
Match: A0A2N9G3M9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21832 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15 Identity = 37/105 (35.24%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of Tan0004451 vs. ExPASy TrEMBL
Match: A0A6A4LZN0 (CCHC-type domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_06540 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.4e-15 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Tan0004451 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05 Identity = 23/92 (25.00%), Postives = 43/92 (46.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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