Tan0004365 (gene) Snake gourd v1

Overview


Name	Tan0004365
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG02: 32299137 .. 32301348 (-)
RNA-Seq Expression	Tan0004365
Synteny	Tan0004365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCTTTCAAAGAGCCTAGATTTTGATCTTTAGCATCGTATTTGTAATTGAAAAAAAGTAAAAATGGATTGTCCCCTCTAAATTTTTGGAAAAGATAATTATCTTTTTAACCCAAGGGAAGATGCTGGGCATTAATTTCCCTAAAAGGATTTCTCTTTCAAAGTAGGAAGTTGGGAGTGAAACATGAGGCTGAAAAAGGGCTAAGGAGAGAGCGATCGTCCACGTGGTTGGCAGCCAAGTGGAATAGCGGATGAAGAACTTGTTTCTCATTGGTCCGAAATCTATCCAACACCCTCCCTCAGATTTCCCCTCCAGATTCTCATCAACACACATGGCTCCATTTAAACCCACAATTCAATTCACAATATCTCCCACACACCCTTCTCAATAAAATCATAAAACATATTTCATTACATACCTGAAACTTCCCATCTCAGAAGAAGCCATGGCTGCAACTTCTGGTGCTCTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAAGCCACACCTTGCTACCCGGAGCAAGAAGCGCTGTCAATGTCGTCGGCTCTCGCAAGCTTGTCATTGTCGCCGCTGCTCAGCCCAAGAAGTCCTGGCTCCCTGGCGTTAGGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCGTATGTCTCTCTTATTTCTTTTAAGTTGTTGCAAAATCTTCAGTTACTGTTTAGAACCTGCTGTTGGAAGAGGCCTTTTATCAAACACTTACTAAGCTGTTGCACATTTTAAGAAATTACTGTTTCGGTTCTAGAAGAGGCATTTTATCACACTTTCTAAGCACTTACTGTTTAGAATCTGGTATAGGCAATTTATCAAACACTTTCTAAGCAAATTACTGTTTAAAATCTGGTATAGACATTTTATCAAACACTTTCTAAGCAATTACTGTTTAAAAATGTGGTATAGGCATTCCATCGAACACTTTCAAAGCAGTTATTCTTAAAAAACTCTAGAAGAGGCATTTAATAAAACAATTTCTAAGCCAATCACAGTTCTAAACTCTGGAAGAGGCATTTCGTCAAACAGATCATAAGCAATTACCTGTTTCGTTTGTATAGACTTCCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGAAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCTGCAGTCGCTCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAGAGCAAGCGATGGGTCGATTTCTTCAACCCAGAGTCTCAATCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACCGGAGAACAGGGGTACCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTCTAAAGGATGGAGTTTACATTCCAGACGCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCTCTTGGATTGTAAAAAAAATTGTTGATGTGACGGAAAAATTGTTCATATTTTCACTAAAAAAAGACTTTGTGAATGGATTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGGTTTTGTTGGAGCTCTAACTCAAAATTCAAAATTGAGTGTGCGTTTTGCCTTCTTTCAATTTTTTCGTTGCTTGCATTGTATATGCTATATCTATTGATATCCAAACTTAAGAAAGCACTTTCCTAATCAAAATCATTCAGATTAGAGGATGATAAAATATTCACAAAATAATTTGAGTTGATACTAGTGAGGGAAGTTTTATCTTTTTGTTAATTTCCATTCATCTTACAACTCTTGAATATTGTTGATTCATTTTCTATAAAATGCCTTAGAGTGGAACCATTTGGTGTAGCATTCCCCAAATTCAAGCAAATTTTCTCTGGATCTCTATTTTTCATTACAATTATTCTTTTAGGAGGGCCTTTTCCCACTCATATTCTACTTTGTGAAGTTCATTGCTATTTCTTCCTGTTTTGAGATTAGTCATTGCCTTTTAGGCTCTTGAGGAGGC

mRNA sequence

CCTCCTTTCAAAGAGCCTAGATTTTGATCTTTAGCATCGTATTTGTAATTGAAAAAAAGTAAAAATGGATTGTCCCCTCTAAATTTTTGGAAAAGATAATTATCTTTTTAACCCAAGGGAAGATGCTGGGCATTAATTTCCCTAAAAGGATTTCTCTTTCAAAGTAGGAAGTTGGGAGTGAAACATGAGGCTGAAAAAGGGCTAAGGAGAGAGCGATCGTCCACGTGGTTGGCAGCCAAGTGGAATAGCGGATGAAGAACTTGTTTCTCATTGGTCCGAAATCTATCCAACACCCTCCCTCAGATTTCCCCTCCAGATTCTCATCAACACACATGGCTCCATTTAAACCCACAATTCAATTCACAATATCTCCCACACACCCTTCTCAATAAAATCATAAAACATATTTCATTACATACCTGAAACTTCCCATCTCAGAAGAAGCCATGGCTGCAACTTCTGGTGCTCTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAAGCCACACCTTGCTACCCGGAGCAAGAAGCGCTGTCAATGTCGTCGGCTCTCGCAAGCTTGTCATTGTCGCCGCTGCTCAGCCCAAGAAGTCCTGGCTCCCTGGCGTTAGGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGAAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCTGCAGTCGCTCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAGAGCAAGCGATGGGTCGATTTCTTCAACCCAGAGTCTCAATCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACCGGAGAACAGGGGTACCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTCTAAAGGATGGAGTTTACATTCCAGACGCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCTCTTGGATTGTAAAAAAAATTGTTGATGTGACGGAAAAATTGTTCATATTTTCACTAAAAAAAGACTTTGTGAATGGATTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGGTTTTGTTGGAGCTCTAACTCAAAATTCAAAATTGAGTGTGCGTTTTGCCTTCTTTCAATTTTTTCGTTGCTTGCATTGTATATGCTATATCTATTGATATCCAAACTTAAGAAAGCACTTTCCTAATCAAAATCATTCAGATTAGAGGATGATAAAATATTCACAAAATAATTTGAGTTGATACTAGTGAGGGAAGTTTTATCTTTTTGTTAATTTCCATTCATCTTACAACTCTTGAATATTGTTGATTCATTTTCTATAAAATGCCTTAGAGTGGAACCATTTGGTGTAGCATTCCCCAAATTCAAGCAAATTTTCTCTGGATCTCTATTTTTCATTACAATTATTCTTTTAGGAGGGCCTTTTCCCACTCATATTCTACTTTGTGAAGTTCATTGCTATTTCTTCCTGTTTTGAGATTAGTCATTGCCTTTTAGGCTCTTGAGGAGGC

Coding sequence (CDS)

ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAAGCCACACCTTGCTACCCGGAGCAAGAAGCGCTGTCAATGTCGTCGGCTCTCGCAAGCTTGTCATTGTCGCCGCTGCTCAGCCCAAGAAGTCCTGGCTCCCTGGCGTTAGGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGAAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCTGCAGTCGCTCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTCGAGAGCAAGCGATGGGTCGATTTCTTCAACCCAGAGTCTCAATCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACCGGAGAACAGGGGTACCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTCTAAAGGATGGAGTTTACATTCCAGACGCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCTCTTGGATTGTAA

Protein sequence

MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Homology

[Close]

BLAST of Tan0004365 vs. ExPASy Swiss-Prot
Match: P27524 (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-120
Identity = 206/256 (80.47%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSA-VNVVGSRKLVIVAAAQPKKSWLPGVR 60
           MA TS A+LNGL S FL GG++S  LL    +A V    + K   V AA  KKSW+P VR
Sbjct: 1   MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 61  GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW 120
           GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAW
Sbjct: 61  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120

Query: 121 SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 180
           SGIPWFEAGADP A+APFSFGTLLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TA
Sbjct: 121 SGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTA 180

Query: 181 ENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIF 240
           ENFAN TGEQGYPGGKFFDPL  AG+L +GVY+PD EKLERLK+AEIKHAR+AMLAMLIF
Sbjct: 181 ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240

Query: 241 YFEAGQGKTPLGALGL 256
           YFEAGQGKTPLGALGL
Sbjct: 241 YFEAGQGKTPLGALGL 256

[Close]

BLAST of Tan0004365 vs. ExPASy Swiss-Prot
Match: P36494 (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.6e-119
Identity = 208/259 (80.31%), Postives = 228/259 (88.03%), Query Frame = 0


Query: 2   AATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNV---VGSRKLVIV-AAAQPKKSWLP 61
           AATS  A++NG  SPFL GG +S   L    S V       SRKLV+V AAA PKKSW+P
Sbjct: 3   AATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIP 62

Query: 62  GVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIG 121
            V+GGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIF+G
Sbjct: 63  AVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVG 122

Query: 122 QAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 181
           QAW+GIPWFEAGADP AVAPFSFGTLLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWS
Sbjct: 123 QAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWS 182

Query: 182 RTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAM 241
           RTAENF+N+TGEQGYPGGKFFDPL  AG++ +GVY PD +KLERLKLAEIKHAR+AMLAM
Sbjct: 183 RTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAM 242

Query: 242 LIFYFEAGQGKTPLGALGL 256
           LIFYFEAGQGKTPLGALGL
Sbjct: 243 LIFYFEAGQGKTPLGALGL 261

[Close]

BLAST of Tan0004365 vs. ExPASy Swiss-Prot
Match: P27525 (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10B PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 9.5e-117
Identity = 200/257 (77.82%), Postives = 224/257 (87.16%), Query Frame = 0


Query: 1   MAATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAA-QPKKSWLPGV 60
           M  TS  A+LNGL S FL GG ++  LL GA     V   ++ V+ AAA  PKKSW+P V
Sbjct: 1   MTTTSATAVLNGLSSSFLTGGKKTQALL-GAHVTARVTTPKRFVVAAAAVAPKKSWIPAV 60

Query: 61  RGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQA 120
           + GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQA
Sbjct: 61  KSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 121 WSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180
           WSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+T
Sbjct: 121 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKT 180

Query: 181 AENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLI 240
           AENFAN TGEQGYPGGKFFDPL  AG+L +GVY+PD EKLERLKLAEIKH+R+AMLAMLI
Sbjct: 181 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLI 240

Query: 241 FYFEAGQGKTPLGALGL 256
           FYFEAGQGKTPLGALGL
Sbjct: 241 FYFEAGQGKTPLGALGL 256

[Close]

BLAST of Tan0004365 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.5e-33
Identity = 90/235 (38.30%), Postives = 120/235 (51.06%), Query Frame = 0


Query: 20  GSRSHTLLPGARSAVN----VVGSRKLVI--VAAAQPKKSWLPGVRGGGNFIDPEWLDGS 79
           G+   + L G R  V+     VGSR + +  VAA   +  W PG         PEWLDGS
Sbjct: 28  GATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPG------STPPEWLDGS 87

Query: 80  LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGI------PWFEA 139
           LPGD+GFDPLGLG DP  LKW  +AEL+H RWAM    GIFI +  + I       W+ A
Sbjct: 88  LPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTA 147

Query: 140 GADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATG 199
           G            TL   +L+L+GW E +RW D   P   + +   P      N    T 
Sbjct: 148 GEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFP-----NNKLTGT- 207

Query: 200 EQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFE 243
           + GYPGG +FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Sbjct: 208 DVGYPGGLWFDPLGWGSG--------SPAKIKELRTKEIKNGRLAMLAVMGAWFQ 239

[Close]

BLAST of Tan0004365 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.5e-32
Identity = 81/196 (41.33%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 54  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI 113
           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI
Sbjct: 68  WFPGSS------PPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGI 127

Query: 114 FIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQ 173
            I +            W++AG+           TL   Q++LMGW E +RW D   P S 
Sbjct: 128 IIPECLERLGFIENFSWYDAGSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSV 187

Query: 174 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIK 233
            +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK
Sbjct: 188 DIEPKYP------HKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIK 240

Query: 234 HARIAMLAMLIFYFEA 244
           + R+AMLA L F F+A
Sbjct: 248 NGRLAMLAFLGFCFQA 240

[Close]

BLAST of Tan0004365 vs. NCBI nr
Match: XP_022988907.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 502.7 bits (1293), Expect = 1.9e-138
Identity = 241/255 (94.51%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRG 60
           MAATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120
           GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS
Sbjct: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Tan0004365 vs. NCBI nr
Match: XP_022927871.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata] >KAG6588777.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022550.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500.4 bits (1287), Expect = 9.4e-138
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGG 61
           AATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GG
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGG 64

Query: 62  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 121
           GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG
Sbjct: 65  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 124

Query: 122 IPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 181
           IPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 182 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 241
           FANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 242 EAGQGKTPLGALGL 256
           EAGQGKTPLGALGL
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. NCBI nr
Match: XP_023531350.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.0 bits (1281), Expect = 4.7e-137
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 2   AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGG 61
           AATSGALLNGLGSPFL GGSR+  LL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GG
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQILLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGG 64

Query: 62  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 121
           GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG
Sbjct: 65  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 124

Query: 122 IPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 181
           IPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 182 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 241
           FANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 242 EAGQGKTPLGALGL 256
           EAGQGKTPLGALGL
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. NCBI nr
Match: XP_022993917.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 497.7 bits (1280), Expect = 6.1e-137
Identity = 235/255 (92.16%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRG 60
           MAATSGA+LNGLGSPFLRGGSR+ TLL GAR  VNVVGSRKLVIVAAAQPKKSW+P V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120
           GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYIPD EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of Tan0004365 vs. NCBI nr
Match: XP_022141907.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic [Momordica charantia])

HSP 1 Score: 497.7 bits (1280), Expect = 6.1e-137
Identity = 240/254 (94.49%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 3   ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGG 62
           ATS ALLNG GSPFLRGG SRSH LL GAR  VNVVGSRKLVIVAAAQPKKSWLPGVRGG
Sbjct: 5   ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGG 64

Query: 63  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 122
           GN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWSG
Sbjct: 65  GNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSG 124

Query: 123 IPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 182
           IPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 183 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 242
           FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 243 EAGQGKTPLGALGL 256
           EAGQGKTPLGALGL
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. ExPASy TrEMBL
Match: A0A6J1JEC2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486120 PE=3 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.2e-139
Identity = 241/255 (94.51%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRG 60
           MAATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120
           GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS
Sbjct: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Tan0004365 vs. ExPASy TrEMBL
Match: A0A6J1EIR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434638 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.6e-138
Identity = 240/254 (94.49%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGG 61
           AATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GG
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGG 64

Query: 62  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 121
           GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG
Sbjct: 65  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 124

Query: 122 IPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 181
           IPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 182 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 241
           FANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 242 EAGQGKTPLGALGL 256
           EAGQGKTPLGALGL
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. ExPASy TrEMBL
Match: A0A6J1JU87 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489772 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.0e-137
Identity = 235/255 (92.16%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRG 60
           MAATSGA+LNGLGSPFLRGGSR+ TLL GAR  VNVVGSRKLVIVAAAQPKKSW+P V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120
           GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG++KDGVYIPD EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of Tan0004365 vs. ExPASy TrEMBL
Match: A0A6J1CL59 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012163 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.0e-137
Identity = 240/254 (94.49%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 3   ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGG 62
           ATS ALLNG GSPFLRGG SRSH LL GAR  VNVVGSRKLVIVAAAQPKKSWLPGVRGG
Sbjct: 5   ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGG 64

Query: 63  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 122
           GN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWSG
Sbjct: 65  GNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSG 124

Query: 123 IPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 182
           IPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 183 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 242
           FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 243 EAGQGKTPLGALGL 256
           EAGQGKTPLGALGL
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. ExPASy TrEMBL
Match: A0A5D3DGI0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00250 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.1e-137
Identity = 235/255 (92.16%), Postives = 245/255 (96.08%), Query Frame = 0


Query: 1   MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRG 60
           MAATSGA+LNGLGSPFLRG SR+ TLL GAR  VNVV S KLV++AAAQPKKSW+PGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120
           GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of Tan0004365 vs. TAIR 10
Match: AT1G15820.1 (light harvesting complex photosystem II subunit 6 )

HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-120
Identity = 203/255 (79.61%), Postives = 226/255 (88.63%), Query Frame = 0


Query: 3   ATSGALLNGLGSPFLRGGSRSHT-LLPGARSAVNVVGSRKLVI-VAAAQPKKSWLPGVRG 62
           A SGA+L+GLGS FL GG R  T L  G  +    VG + L++  AAAQPKKSW+P V+G
Sbjct: 4   AVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKG 63

Query: 63  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 122
           GGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIF+GQAWS
Sbjct: 64  GGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 123

Query: 123 GIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 182
           G+ WFEAGA P A+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAE
Sbjct: 124 GVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAE 183

Query: 183 NFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFY 242
           NFAN TG+QGYPGG+FFDPLG AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFY
Sbjct: 184 NFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFY 243

Query: 243 FEAGQGKTPLGALGL 256
           FEAGQGKTPLGALGL
Sbjct: 244 FEAGQGKTPLGALGL 258

[Close]

BLAST of Tan0004365 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-33
Identity = 81/196 (41.33%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 54  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI 113
           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI
Sbjct: 68  WFPGSS------PPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGI 127

Query: 114 FIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQ 173
            I +            W++AG+           TL   Q++LMGW E +RW D   P S 
Sbjct: 128 IIPECLERLGFIENFSWYDAGSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSV 187

Query: 174 SVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIK 233
            +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK
Sbjct: 188 DIEPKYP------HKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIK 240

Query: 234 HARIAMLAMLIFYFEA 244
           + R+AMLA L F F+A
Sbjct: 248 NGRLAMLAFLGFCFQA 240

[Close]

BLAST of Tan0004365 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-33
Identity = 95/242 (39.26%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 8   LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDP 67
           L  G+   FL     + +++    S+V   G    +    A  + +WLPG+        P
Sbjct: 5   LRGGITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PP 64

Query: 68  EWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQ--AWSGI--- 127
            +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI   
Sbjct: 65  PYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNL 124

Query: 128 -PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 187
             W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A  
Sbjct: 125 PVWYEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA-- 184

Query: 188 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 244
            A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML F+ 
Sbjct: 185 -ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFV 224

[Close]

BLAST of Tan0004365 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-33
Identity = 95/242 (39.26%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 8   LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDP 67
           L  G+   FL     + +++    S+V   G    +    A  + +WLPG+        P
Sbjct: 5   LRGGITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PP 64

Query: 68  EWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQ--AWSGI--- 127
            +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI   
Sbjct: 65  PYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNL 124

Query: 128 -PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 187
             W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A  
Sbjct: 125 PVWYEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA-- 184

Query: 188 FANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYF 244
            A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML F+ 
Sbjct: 185 -ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFV 224

[Close]

BLAST of Tan0004365 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-32
Identity = 81/204 (39.71%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 45  VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGR 104
           VAA   +  W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H R
Sbjct: 46  VAADPDRPIWFPG------STPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCR 105

Query: 105 WAMAAVVGIFIGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRW 164
           WAM    GIFI +  + I       W+ AG            TL   +L+L+GW E +RW
Sbjct: 106 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFT---DKTTLFVVELILIGWAEGRRW 165

Query: 165 VDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKL 224
            D   P S + +   P      N    T + GYPGG +FDPLG+              KL
Sbjct: 166 ADIIKPGSVNTDPVFP-----NNKLTGT-DVGYPGGLWFDPLGWGSG--------SPAKL 225

Query: 225 ERLKLAEIKHARIAMLAMLIFYFE 243
           + L+  EIK+ R+AMLA++  +F+
Sbjct: 226 KELRTKEIKNGRLAMLAVMGAWFQ 226

The following BLAST results are available for this feature:

BLAST of Tan0004365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27524	1.1e-120	80.47	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum ...	[more]
P36494	4.6e-119	80.31	Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562...	[more]
P27525	9.5e-117	77.82	Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum ...	[more]
P13869	6.5e-33	38.30	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q8LCQ4	5.5e-32	41.33	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Tan0004365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988907.1	1.9e-138	94.51	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_022927871.1	9.4e-138	94.49	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata...	[more]
XP_023531350.1	4.7e-137	94.09	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022993917.1	6.1e-137	92.16	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_022141907.1	6.1e-137	94.49	chlorophyll a-b binding protein CP24 10A, chloroplastic [Momordica charantia]	[more]

BLAST of Tan0004365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEC2	9.2e-139	94.51	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EIR2	4.6e-138	94.49	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JU87	3.0e-137	92.16	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CL59	3.0e-137	94.49	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3DGI0	5.1e-137	92.16	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Tan0004365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15820.1	1.5e-120	79.61	light harvesting complex photosystem II subunit 6	[more]
AT1G19150.1	3.9e-33	41.33	photosystem I light harvesting complex gene 6	[more]
AT1G45474.1	6.7e-33	39.26	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	6.7e-33	39.26	photosystem I light harvesting complex gene 5	[more]
AT3G61470.1	3.3e-32	39.71	photosystem I light harvesting complex gene 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..243 e-value: 1.6E-48 score: 165.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 67..254 e-value: 6.6E-54 score: 184.7
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..255
None	No IPR available	PANTHER	PTHR21649:SF114	CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC	coord: 1..255
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 66..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004365.1	Tan0004365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding