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Tan0004361 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATAACAGGAGAAATCAAAATCTTCAAAACCCCAATTCAAGCTCAAACCATTCTCAAAAACCATCCTCACCATCTTTTGTTTGAATCCGATGAAGTTAAGGTTCTCGGAATTCAAGCTCAGCCATGGGAGCTGCAGCACAATCTATCACCAGGGCAGATTTACTATGGGCTCGACTCCCCCTCAAATTTTCATCTTTAACCATATGTATAAAAAAAGTCATATTAAATAACAAAAAAAAAAAACCTTCTGGCATAGTGATTAATAGTTTATAAGCCTCACTCAACTTATAGGTTCAATCTCTGGTTTAGAAAGTTTTAAACATTTTTTTCTAATGTCATATTCAAGCCCCATCGATAGATCTGTCACTGCCGGAGAGGCTCTATTTTCTGGTGGAGATCCCTGAGAATTGCAGTTATTTCAAAAGGGTCATTGAGTCGACTGCCGTGAGCACTGCCGAGGCCCAGCTGAAGCAGCGGCGGAGGAAGGGTTTGGAATTGGAAGATGGGGTTTTGAGAGTGAGAATTAGGGTTCGGAAGGCGGAGGTGGACAAGTTGGTGAGGGAATGTAAGGATGAGTCCGCGGCGGCGGAGAGGCTTCTTGGTCTGTTCATGGCAGTGCCACGGCGGTGTGCGCAGAACGGTGGCCGCATTCGACGGCTCCCACCGCTGCCGGAGCTCAGGTACTTAATTGAGACAAAATGA ATGAAAATAACAGGAGAAATCAAAATCTTCAAAACCCCAATTCAAGCTCAAACCATTCTCAAAAACCATCCTCACCATCTTTTGTTTGAATCCGATGAAGTTAAGGTTCTCGGAATTCAAGCTCAGCCATGGGAGCTGCAGCACAATCTATCACCAGGGCTCTATTTTCTGGTGGAGATCCCTGAGAATTGCAGTTATTTCAAAAGGGTCATTGAGTCGACTGCCGTGAGCACTGCCGAGGCCCAGCTGAAGCAGCGGCGGAGGAAGGGTTTGGAATTGGAAGATGGGGTTTTGAGAGTGAGAATTAGGGTTCGGAAGGCGGAGGTGGACAAGTTGGTGAGGGAATGTAAGGATGAGTCCGCGGCGGCGGAGAGGCTTCTTGGTCTGTTCATGGCAGTGCCACGGCGGTGTGCGCAGAACGGTGGCCGCATTCGACGGCTCCCACCGCTGCCGGAGCTCAGGTACTTAATTGAGACAAAATGA ATGAAAATAACAGGAGAAATCAAAATCTTCAAAACCCCAATTCAAGCTCAAACCATTCTCAAAAACCATCCTCACCATCTTTTGTTTGAATCCGATGAAGTTAAGGTTCTCGGAATTCAAGCTCAGCCATGGGAGCTGCAGCACAATCTATCACCAGGGCTCTATTTTCTGGTGGAGATCCCTGAGAATTGCAGTTATTTCAAAAGGGTCATTGAGTCGACTGCCGTGAGCACTGCCGAGGCCCAGCTGAAGCAGCGGCGGAGGAAGGGTTTGGAATTGGAAGATGGGGTTTTGAGAGTGAGAATTAGGGTTCGGAAGGCGGAGGTGGACAAGTTGGTGAGGGAATGTAAGGATGAGTCCGCGGCGGCGGAGAGGCTTCTTGGTCTGTTCATGGCAGTGCCACGGCGGTGTGCGCAGAACGGTGGCCGCATTCGACGGCTCCCACCGCTGCCGGAGCTCAGGTACTTAATTGAGACAAAATGA MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPGLYFLVEIPENCSYFKRVIESTAVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGGRIRRLPPLPELRYLIETK Homology
BLAST of Tan0004361 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 55/172 (31.98%), Postives = 83/172 (48.26%), Query Frame = 0
BLAST of Tan0004361 vs. NCBI nr
Match: RYR14312.1 (hypothetical protein Ahy_B04g070865 isoform A [Arachis hypogaea]) HSP 1 Score: 96.7 bits (239), Expect = 2.0e-16 Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0
BLAST of Tan0004361 vs. NCBI nr
Match: XP_028115913.1 (uncharacterized protein At1g66480 [Camellia sinensis] >THF98833.1 hypothetical protein TEA_001765 [Camellia sinensis var. sinensis]) HSP 1 Score: 96.3 bits (238), Expect = 2.6e-16 Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0
BLAST of Tan0004361 vs. NCBI nr
Match: XP_042023411.1 (uncharacterized protein At1g66480-like isoform X1 [Salvia splendens]) HSP 1 Score: 95.5 bits (236), Expect = 4.4e-16 Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Tan0004361 vs. NCBI nr
Match: XP_042023412.1 (uncharacterized protein At1g66480-like isoform X2 [Salvia splendens]) HSP 1 Score: 95.5 bits (236), Expect = 4.4e-16 Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Tan0004361 vs. NCBI nr
Match: KAG6396717.1 (hypothetical protein SASPL_142873 [Salvia splendens]) HSP 1 Score: 95.5 bits (236), Expect = 4.4e-16 Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Tan0004361 vs. ExPASy TrEMBL
Match: A0A444ZJE9 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g070865 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.5e-17 Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 0
BLAST of Tan0004361 vs. ExPASy TrEMBL
Match: A0A4S4D9W7 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_001765 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16 Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 0
BLAST of Tan0004361 vs. ExPASy TrEMBL
Match: A0A5B7BXL2 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042739 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 0
BLAST of Tan0004361 vs. ExPASy TrEMBL
Match: A0A4D8YHC7 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_048602 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16 Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Tan0004361 vs. ExPASy TrEMBL
Match: A0A7J7H1M0 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_015796 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.8e-16 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 0
BLAST of Tan0004361 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. ) HSP 1 Score: 79.0 bits (193), Expect = 4.0e-15 Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Tan0004361 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 ) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11 Identity = 55/172 (31.98%), Postives = 83/172 (48.26%), Query Frame = 0
BLAST of Tan0004361 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11 Identity = 54/168 (32.14%), Postives = 85/168 (50.60%), Query Frame = 0
BLAST of Tan0004361 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10 Identity = 45/151 (29.80%), Postives = 74/151 (49.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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