Tan0004328 (gene) Snake gourd v1

Overview


Name	Tan0004328
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrotransposon protein
Location	LG08: 13383650 .. 13384411 (-)
RNA-Seq Expression	Tan0004328
Synteny	Tan0004328

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGGAATGGTTGTAGTGGTTTTGGTTGGAATGAAGAATTTAAATGTGTTGAAGCAGAGAAAGAGGTATTCGATGCGTGGGTTAAGGTAAGATAGTGTTATTATAACATATTATTATTAGCATTCATGGTAGATATATGTAATATATTTATTCACATGTAGAGCCATACAAATGCCAAAGGGATGAGGAACAAGCCATTTCCGCACTATGATGAGCTGGCAGTTGTCTTCGGAAAAGATAGAGCTACAGGAATAGGCGCAGAGACCCCACAGGAAATGGCCTTCAATGTTGCGGAACAAATGGAGGAGGAGATTCGTTTGGGATCACAAGACTTCATAGGGACAGAACAACGAACGATGGAGAATCCAGGACTTGGTGACGTAGGGGAAGATGACTTGCCAGACACTCCTACTAGTAGGCGTAATACATCTGGCATGTCTTCTAGATGTACTGGGAGCAAAAGAAAACGATCGTCCTTCCAGACTGAATTAATTGATGTTGTGCGGACAAAGAATGGATATGCGCACTACCACATGCAACAACTTCTATCATGGCAGAAGGAGAAGTATGAATTGGAGGCCTCACGAAGGAAAGAAGTAGTCGATCTCTTGTATCAGATAGAAGGATTGACTGAGCATGATCGTGTCTCCCTGATTGACTTGCTTTGGATCGATATCCGTAAGATCGATTGCTTTCTACAGGTTCCGCCTCAATCGAGAAAGGCGTATTGCATGCGTCTTCTAGGAAGGACTGGATGA

mRNA sequence

ATGCTTGGGAATGGTTGTAGTGGTTTTGGTTGGAATGAAGAATTTAAATGTGTTGAAGCAGAGAAAGAGGTATTCGATGCGTGGGTTAAGAGCCATACAAATGCCAAAGGGATGAGGAACAAGCCATTTCCGCACTATGATGAGCTGGCAGTTGTCTTCGGAAAAGATAGAGCTACAGGAATAGGCGCAGAGACCCCACAGGAAATGGCCTTCAATGTTGCGGAACAAATGGAGGAGGAGATTCGTTTGGGATCACAAGACTTCATAGGGACAGAACAACGAACGATGGAGAATCCAGGACTTGGTGACGTAGGGGAAGATGACTTGCCAGACACTCCTACTAGTAGGCGTAATACATCTGGCATGTCTTCTAGATGTACTGGGAGCAAAAGAAAACGATCGTCCTTCCAGACTGAATTAATTGATGTTGTGCGGACAAAGAATGGATATGCGCACTACCACATGCAACAACTTCTATCATGGCAGAAGGAGAAGTATGAATTGGAGGCCTCACGAAGGAAAGAAGTAGTCGATCTCTTGTATCAGATAGAAGGATTGACTGAGCATGATCGTGTCTCCCTGATTGACTTGCTTTGGATCGATATCCGTAAGATCGATTGCTTTCTACAGGTTCCGCCTCAATCGAGAAAGGCGTATTGCATGCGTCTTCTAGGAAGGACTGGATGA

Coding sequence (CDS)

ATGCTTGGGAATGGTTGTAGTGGTTTTGGTTGGAATGAAGAATTTAAATGTGTTGAAGCAGAGAAAGAGGTATTCGATGCGTGGGTTAAGAGCCATACAAATGCCAAAGGGATGAGGAACAAGCCATTTCCGCACTATGATGAGCTGGCAGTTGTCTTCGGAAAAGATAGAGCTACAGGAATAGGCGCAGAGACCCCACAGGAAATGGCCTTCAATGTTGCGGAACAAATGGAGGAGGAGATTCGTTTGGGATCACAAGACTTCATAGGGACAGAACAACGAACGATGGAGAATCCAGGACTTGGTGACGTAGGGGAAGATGACTTGCCAGACACTCCTACTAGTAGGCGTAATACATCTGGCATGTCTTCTAGATGTACTGGGAGCAAAAGAAAACGATCGTCCTTCCAGACTGAATTAATTGATGTTGTGCGGACAAAGAATGGATATGCGCACTACCACATGCAACAACTTCTATCATGGCAGAAGGAGAAGTATGAATTGGAGGCCTCACGAAGGAAAGAAGTAGTCGATCTCTTGTATCAGATAGAAGGATTGACTGAGCATGATCGTGTCTCCCTGATTGACTTGCTTTGGATCGATATCCGTAAGATCGATTGCTTTCTACAGGTTCCGCCTCAATCGAGAAAGGCGTATTGCATGCGTCTTCTAGGAAGGACTGGATGA

Protein sequence

MLGNGCSGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETPQEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRCTGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGLTEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGRTG

Homology

[Close]

BLAST of Tan0004328 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 5.8e-46
Identity = 110/220 (50.00%), Postives = 134/220 (60.91%), Query Frame = 0


Query: 7   SGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETP 66
           SGFGWNEEFKCV+ EKE+FD WV+SH NAKGM NK F HYD+L+ VFGKDRA      TP
Sbjct: 86  SGFGWNEEFKCVQVEKEIFDLWVRSHLNAKGMWNKSFLHYDDLSTVFGKDRA---NCHTP 145

Query: 67  QEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRC 126
                                    E    E+P   D  +++  +  T R +    SSR 
Sbjct: 146 -------------------------EVCQAESPLNQDEIDEEPAEQSTGRASVLAESSR- 205

Query: 127 TGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGL 186
            GSKRKR SFQ E+ID++R+       HM +L SWQKEKYELE  RRKEVV+ +Y I+GL
Sbjct: 206 -GSKRKRPSFQAEMIDIMRSTVEMQSTHMGRLASWQKEKYELEFGRRKEVVNAIYSIDGL 265

Query: 187 TEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGR 227
            E D+V+ IDLL  DI+K DCFL VP  +RK YC+ LL R
Sbjct: 266 DEDDQVTFIDLLVTDIQKTDCFLAVPEHARKRYCLHLLER 275

[Close]

BLAST of Tan0004328 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-45
Identity = 109/220 (49.55%), Postives = 136/220 (61.82%), Query Frame = 0


Query: 7   SGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETP 66
           SGF WNEEFKCV+ E+E+FD WV+SH NAKGM  KPFPHYD+L+ VFGKDRA      TP
Sbjct: 86  SGFNWNEEFKCVQVEREIFDLWVRSHPNAKGMWKKPFPHYDDLSAVFGKDRA---DCHTP 145

Query: 67  QEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRC 126
                                    E R  E+P   D  +++  +  T R +    SSR 
Sbjct: 146 -------------------------EVRQTESPLNQDEIDEEPAEQSTGRASVPTESSR- 205

Query: 127 TGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGL 186
            GSKRKRSSFQ E+ID+V++       HM +L SWQ EKYELE    KEVV+ +Y I+ L
Sbjct: 206 -GSKRKRSSFQVEMIDIVKSTVEMQSTHMGRLASWQNEKYELEL---KEVVNAIYNIDDL 265

Query: 187 TEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGR 227
            E+D+V+LIDL+  DI+K DCFL VP  +RK YC+RLLGR
Sbjct: 266 EENDQVTLIDLIVTDIQKTDCFLAVPEHARKRYCLRLLGR 272

[Close]

BLAST of Tan0004328 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 4.9e-45
Identity = 104/220 (47.27%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 8   GFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETPQ 67
           GFGWN++ KC+EAEKEVFD WVKSH NAKG+RNKP PHYD+L V FGKDRATG   + P 
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPV 63

Query: 68  EMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRCT 127
           +MA + A  + E+    +QDF   +          D  E+DLP+TPTS + T G SS   
Sbjct: 64  DMASSAAATIAEDAHFEAQDFYIPDPPMFNT--TEDAIEEDLPNTPTS-KPTIGTSS--G 123

Query: 128 GSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGLT 187
           GSKRKRS + +E++DVVRT       H++++ +W  +K E + +RRK V D L QI  L 
Sbjct: 124 GSKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLE 183

Query: 188 EHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGRT 228
            +D V L+ +L  +++K   FL+VP + +K +CM+LLG++
Sbjct: 184 ANDYVRLVGILMTNVKKSISFLEVPIEFKKMFCMQLLGKS 217

[Close]

BLAST of Tan0004328 vs. NCBI nr
Match: XP_038895773.1 (uncharacterized protein LOC120083935 [Benincasa hispida])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-43
Identity = 103/220 (46.82%), Postives = 123/220 (55.91%), Query Frame = 0


Query: 7   SGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETP 66
           SGF WNEEFKCV+ E+E+FD WV+SH NAKGM NKPFPHYD+L+ VFGK +A G  +E P
Sbjct: 124 SGFDWNEEFKCVQVEREIFDPWVRSHPNAKGMWNKPFPHYDDLSTVFGKYKAVGQSSEDP 183

Query: 67  QEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRC 126
             M  N   + E+EIRLGSQD                        TP S           
Sbjct: 184 YVMTTNAFREFEDEIRLGSQDC----------------------HTPEST---------- 243

Query: 127 TGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGL 186
                                      HM +L SWQKEKYELE  RRKEVV+ +Y I+GL
Sbjct: 244 ---------------------------HMGRLASWQKEKYELEFGRRKEVVNAIYNIDGL 284

Query: 187 TEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGR 227
            E D+V+LIDLL  DI+K +CFL VP  +RK YC+RLLGR
Sbjct: 304 DEDDQVTLIDLLVTDIQKTNCFLAVPEHARKRYCLRLLGR 284

[Close]

BLAST of Tan0004328 vs. NCBI nr
Match: XP_038899910.1 (uncharacterized protein LOC120087100 [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 7.3e-41
Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 7   SGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETP 66
           SGFGWNEEFKCV+ EKE+F+   +SH NAKGM NK FPHYD+L+ VFGKDRA G  +E P
Sbjct: 5   SGFGWNEEFKCVQVEKEIFN---RSHPNAKGMWNKSFPHYDDLSTVFGKDRAVGQSSEDP 64

Query: 67  QEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRC 126
             MA N   + E+EIRLGSQD    E R  E+P   D  +++  +  T R +    +S+ 
Sbjct: 65  YVMAKNAFREFEDEIRLGSQDCRTAEVRQTESPLNQDEIDEEPAEQSTGRASVPVETSQ- 124

Query: 127 TGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGL 186
            GSKRKR SFQ E+ID++R+       HM +L SWQKEKYELE    KEVV+ +Y I+GL
Sbjct: 125 -GSKRKRPSFQAEMIDIMRSTVEMQSTHMGRLASWQKEKYELEFEHWKEVVNAIYSIDGL 184

Query: 187 TEHDRV 193
            E DR+
Sbjct: 185 DEDDRL 185

[Close]

BLAST of Tan0004328 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 104/220 (47.27%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 8   GFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAETPQ 67
           GFGWN++ KC+EAEKEVFD WVKSH NAKG+RNKP PHYD+L V FGKDRATG   + P 
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPV 63

Query: 68  EMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSRCT 127
           +MA + A  + E+    +QDF   +          D  E+DLP+TPTS + T G SS   
Sbjct: 64  DMASSAAATIAEDAHFEAQDFYIPDPPMFNT--TEDAIEEDLPNTPTS-KPTIGTSS--G 123

Query: 128 GSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEGLT 187
           GSKRKRS + +E++DVVRT       H++++ +W  +K E + +RRK V D L QI  L 
Sbjct: 124 GSKRKRSGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLE 183

Query: 188 EHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLLGRT 228
            +D V L+ +L  +++K   FL+VP + +K +CM+LLG++
Sbjct: 184 ANDYVRLVGILMTNVKKSISFLEVPIEFKKMFCMQLLGKS 217

[Close]

BLAST of Tan0004328 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-34
Identity = 87/228 (38.16%), Postives = 131/228 (57.46%), Query Frame = 0


Query: 1   MLGNGCSGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATG 60
           M G  CSGFGWNEEF+C+ AE+++FD+W+KSH  AKG+ +K FP+YD+L+ VFGKDRATG
Sbjct: 84  MRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATG 143

Query: 61  IGAETPQEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDL----PDTPTSR 120
             +ET   +  NV+    + I LG  D    +  TM + G+  +  D++        + R
Sbjct: 144 ARSETFPNVGSNVSNMFNDTIPLG--DSHDEDIPTMYSQGV-HMSPDEMFGIRAGQASER 203

Query: 121 RNTSGMSSRCTGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEV 180
           RN S +      SKRKR S + E ++V+R+   + +  ++ +  W KEK  +E   R +V
Sbjct: 204 RNCSSV------SKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQV 263

Query: 181 VDLLYQIEGLTEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLL 225
           V  L  I  L   DR  L+ +L+  +  I+ FL +P + +  YC  LL
Sbjct: 264 VKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Tan0004328 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-34
Identity = 87/228 (38.16%), Postives = 131/228 (57.46%), Query Frame = 0


Query: 1   MLGNGCSGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATG 60
           M G  CSGFGWNEEF+C+ AE+++FD+W+KSH  AKG+ +K FP+YD+L+ VFGKDRATG
Sbjct: 84  MRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATG 143

Query: 61  IGAETPQEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDL----PDTPTSR 120
             +ET   +  NV+    + I LG  D    +  TM + G+  +  D++        + R
Sbjct: 144 ARSETFPNVGSNVSNMFNDTIPLG--DSHDEDIPTMYSQGV-HMSPDEMFGIRAGQASER 203

Query: 121 RNTSGMSSRCTGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEV 180
           RN S +      SKRKR S + E ++V+R+   + +  ++ +  W KEK  +E   R +V
Sbjct: 204 RNCSSV------SKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQV 263

Query: 181 VDLLYQIEGLTEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLL 225
           V  L  I  L   DR  L+ +L+  +  I+ FL +P + +  YC  LL
Sbjct: 264 VKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Tan0004328 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.7e-31
Identity = 87/213 (40.85%), Postives = 120/213 (56.34%), Query Frame = 0


Query: 1   MLGNGCSGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATG 60
           M+G  CSGFGWNE  KC+E EK VFD WVK H NA+G+ NKPFP++ +L VVFG+DRATG
Sbjct: 192 MMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATG 251

Query: 61  IGAETPQEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENP-GLGDVGEDDLPDTPTSRRNT 120
              +TP EM+   A   EE+      D I  E   + NP GL     +D+P TPTS  + 
Sbjct: 252 GRCKTPVEMSSQTARDTEED----DMD-INLEDFDIPNPHGLEPPSGEDMPSTPTSMTHD 311

Query: 121 SGMSSRCTGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDL 180
           +G SSR     +KR S+  +L+D  R         + ++ +WQ+EK E+E+S  K +   
Sbjct: 312 AG-SSR---PSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAE 371

Query: 181 LYQIEGLTEHDRVSLIDLLWIDIRKIDCFLQVP 213
           L  I G+   D + + + L  D   +  FL  P
Sbjct: 372 LQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYP 395

[Close]

BLAST of Tan0004328 vs. ExPASy TrEMBL
Match: A0A5A7U4M2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00330 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.2e-30
Identity = 86/219 (39.27%), Postives = 123/219 (56.16%), Query Frame = 0


Query: 6   CSGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATGIGAET 65
           CSGFGWN+E KC+ AEKEVFD WVKSH  AKG+ NK F HYDEL+ VFGKDRATG  AE+
Sbjct: 38  CSGFGWNDEKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAES 97

Query: 66  PQEMAFNVAEQMEEEIRLGSQDFIGTEQRTMENPGLGDVGEDDLPDTPTSRRNTSGMSSR 125
             ++  N     +      +   + T+   M +PGL ++  DDL +T T+R   S   + 
Sbjct: 98  FADIGSNDPAGYD---AFAADTVLDTDFPPMYSPGL-NMSPDDLMETRTAR--VSERRNV 157

Query: 126 CTGSKRKRSSFQTELIDVVRTKNGYAHYHMQQLLSWQKEKYELEASRRKEVVDLLYQIEG 185
            +GSK KR    T+  D+VRT   Y +  + ++  W   + +     R+E+V  L  I  
Sbjct: 158 SSGSKWKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPE 217

Query: 186 LTEHDRVSLIDLLWIDIRKIDCFLQVPPQSRKAYCMRLL 225
           LT  DR  L+ ++  ++  +  FL+VP   +  YC  +L
Sbjct: 218 LTLMDRCRLMRIIMRNVDDMKAFLKVPDNMKYPYCSIIL 250

[Close]

BLAST of Tan0004328 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 7   SGFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFGKDRATG 61
           SGFGW+ E K   A  EV+  ++K+H N K M+ +   H+++L ++FG   ATG
Sbjct: 88  SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATG 141

[Close]

BLAST of Tan0004328 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 16/47 (34.04%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 8   GFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFG 55
           GF W+ E + V A+  V+  ++K+H +A+    +P P+Y +L V+ G
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

[Close]

BLAST of Tan0004328 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 16/47 (34.04%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 8   GFGWNEEFKCVEAEKEVFDAWVKSHTNAKGMRNKPFPHYDELAVVFG 55
           GF W+ E + V A+  V+  ++K+H +A+    +P P+Y +L V+ G
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

The following BLAST results are available for this feature:

BLAST of Tan0004328 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0004328 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896380.1	5.8e-46	50.00	uncharacterized protein LOC120084641 [Benincasa hispida]	[more]
XP_038887234.1	1.7e-45	49.55	uncharacterized protein LOC120077425 [Benincasa hispida]	[more]
XP_022158565.1	4.9e-45	47.27	uncharacterized protein LOC111025018 [Momordica charantia]	[more]
XP_038895773.1	1.2e-43	46.82	uncharacterized protein LOC120083935 [Benincasa hispida]	[more]
XP_038899910.1	7.3e-41	52.69	uncharacterized protein LOC120087100 [Benincasa hispida]	[more]

BLAST of Tan0004328 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DW73	2.4e-45	47.27	uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7U0H7	7.2e-34	38.16	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	7.2e-34	38.16	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5D3C7T4	9.7e-31	40.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4M2	8.2e-30	39.27	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Tan0004328 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30140.1	1.6e-06	40.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.1	1.5e-04	34.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.5e-04	34.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004328.1	Tan0004328.1	mRNA