Tan0004291 (gene) Snake gourd v1

Overview
NameTan0004291
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionALBINO3-like protein 2, chloroplastic
LocationLG01: 47832696 .. 47838595 (+)
RNA-Seq ExpressionTan0004291
SyntenyTan0004291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTTGATCACCATCCTGGATTTGACTGTGTAAGGCTGAATTATTAAATATTGGAAAAAAAATCAAAATAATTTTAAACAATACACCAAGCAGACTGAAAAAGTTATCTCATTAAGCCACTTGAAAATATTTTGTTTAATGCATGATATTGGTGTAAATGTCCACACCCCTTTGAAGATTATAGTCTTTCTTCTCTTTTAAATATTTGACTTCTTTCTAACCCACATTTGATGGGATTAATGTTATCAATGAAATCTTTTCTGTTTCGAAGTTCAAAAAAAAAAAAAAAAAAATTAAGCCACTTGAAAAGTGCAATCAAGTGCATGGATGTGTTGGGCTTTGTAGTTTGATGTATTTAGCTCGTCATCCTATCGTACGAGATGCCTCCTGGATTTCCTTCCATTTCTTAGCTTCGATATGATCAACAAGCTTACGTAGTTGCATTATTTTCAATTTTTTATGCCTATTAGATTATTTCCTATCTAAAAAAAAATATATCTATAGATTAATTTTTATTTTTTATGTCTAGGATCTAGAGTTGGAAACAGTGAAGTTAAGTTTATGGTGCATTAATTGCAGGGTGGTGCTTTATGGTTCCAAAATCTGACAGAGTATCCACACGGAGTTCTAGGCCCCATATTTCCATTTCTAATTGCCAGCTTGCACTTCATTAATGTTCAGGTATTCCACTTATTTCTCGTTTTCAAGCACAAACTTGTGCAACCCATTTCTTTGAAAAGGGTGGTATGTTAAGTTGGATTCTTCTGATCTATCTTGAGTAGTTATGAAGCATGTGAAGATTATACAGTGCTATTGCCCAGGGTTAAGAGGCAAGGGCAAGCTAAGGGTGCATTTGGTTAGTGATTTGAACACATGAATATGAAAACAAGATGTTAAATCACCAATCAACTCAAAAGCTTAAGCTGATGGGTTATGATAAATTTAATTACATTAACATCCCAACACAAGGGTTCTAAGAAGGTTCTTTGGTTGACTTTTGTTCGTGGTTTCTTGTGGCATCTTTGGATCGAGAGGAATGGTCGTTTATTCAGGGATGTTTCCTCTTCTTTCGATCGTTTTATGGATCATGTTCTTTCAATTGTTTATTCGTGGTGCAAGCATGTACAACCTTTTGGTCTTGATAGTTTATCGTTTTTTATGTCAAATTGGCGATCGTTCTTGTAACTCACCTTTTGGTGCTCGGAGTTTTCTCCATTTCATTTATCAATGAAATTGTTTCTTATTGCAAAAAAAAAACATCCCAACACAAAGGATTCAATGAAAAGCAAAGTTGTATTTCATGTTTTCAGTATTTTTTGATATGTGTTTGGTAGTAGATTTATAAACTGAATCCAAATTTGAACAATTGTTCAAAATGTTTGTTTGATAGTATATTTATAGACCATAAAAATAGTTATAGTTAGTGTTTTCAAAGCGCAAGGCGCACCTCAGGGCGACAAGCCCTTTGATCGTCCGGAGGCGAGAGGCAACAAAAAGGCGTTGTTCGAGTGAAGCGAGACGCAATAAATAAATAATATATAGAGTATAAATTTTATAGTAAATATAGTCACGCAAAATGTCAGAGCCTTAAAAACTTAATACTAATTGGTAATAACAACAAAATGTTAAAAACATACAATATTTTTTTTTAACAAGACAACAAAGATTTTATTGATATAATGAAAGGAGACTAACGCTCCAAGTACAAACCTTACAACGGAAAATGAACAATCGGAAGAAACATACCAAAACAAAGAGAATACAAAAGAACTCCAAACAAACCAAAACACAGCAAAGACCCAAGAAACATAGGGAAACCTCAAAAAATACCAGCATAGCAACAACAACAATTGACAACCGATACGAAAGAAACAAGGAACCAAGGAAGCCACACCCAACCAAGACAAAATCAAATAACAAAAGAACTAACTCAACAACCAACCGATCCCCACCGAGACAACCCACTCAAAGAAACCAACCAAAGTACTACCTCATCATCCAACCAAAAAATGCACAAAACAATCCACCCAAGCTCTGGCCAACTGTGAAACAAACTAACTAGTTGGCCAAACTAACTGCTGAGGACAATTGCCAAATCAAACTCACAAGCTCCAAAAAGACTTAATAATTAAAATCAATTTAAAGCCAACTTTGATTCTTGAAGCATCACCCCAATCAAACAAAATCTTCAAACCAACCAACTTAGAACCGTCCCCCAAACCCCGCATGTTCCACGAGAGAAATTTCATTGATTCAAAGTAACCTCAGAAGTAGGGCCAATTCCTCTAAATTGCAATCCACTAGCTTTGATTAACGATTCAAATCTTCTTAGTTTAGGAGGCACAATTGGATCTGCAAGAGGTGCCAAACATTCCATAGTTCCATTAATAGCTACCAGGCTACTTTCAGGCTGATCAGGAGAATTAAAAAGTTTATCTAATTTAATGAACAAAGAATTATCCCTCGAACTAACAACCAAATGCAACACATGCTTTGAGAATTCCCCTTCTGGACTACTTAGACTTACAATAGAATCCACCTCCCAATCCTCCAACCCATTCAAACTAGCGAAGTCAAACTTTTTAATAACAGGGTCCCTTGGTTGCAAGCAAGCTCGATAAAAATGCACACCTGAATTACCAATATTGTGTTTCTCAATATTAACCACTTGCTTCGTACCAGTTGAAAAGATCCCTCCATTTAATTCTAAACCCTCACTCGGGATCAAATTTTTTTTTTTGACAAGGCAACAACAAATTTTCATTGAAATAATGAAATGAGACTGATGCTCAAAGTACAAACTCCAAGAGGAGAACAAAAGAAAAAAGAAAACAAAAACAACCCCTCACCAAGAACACACAAAAAGAACTCGAGGACAAAAGAGGGATCCATAAGATTTTCTAAACCCTCACTCGGGATCAAAAATTTAGAAATCGATTCTTCAAAGTTTTCACCATGGAAAAGAGAAGGCTTGTTGGCCCCCTATGAACACATCTTTCATCTTGCTCCTTTTTCGAGTATAATATTTAAAATAAGCTACACAAAAATTATCACTGACCTCTTTCACTGAGGTTGGAACAGGGGAAGCAAAAACTTCATTCTCTTTAAATCCATCTTTGGAGTTCAAATCACTAGGGGAATGGAATGCACAATAGAAGACATGCCTTGTTGAAGCGAGTTTACAGCTGCTTCCCCACCCAAAAATTGATCACTACCCCTTTCTGCTTGGACCACATAAGAGAAATCAACCACAGAACCCTCGTTCCCCAACCATTTCTGCCTGAAAGAAAACGAAGGAGACTCCTCACGACCTTCAACACCAAAAGTCTCACTTGCCTTGACTTTATCCGTTTCAATGGCCCTATTACCTTCCCCCATTTTCACCTTCAAAGTCACCAAATCCTCTCGACATCCTTGCAAACTGATCTCATGAGCATCCCCATCAACTTCACCATCTAAGCGTAGTGATTTTTCATAAACCAAAGAGTCCTTTACTAGGAAAGAGATAGAATCAAGTGCCCCTTCATCCTCCATAACCTGATAAATACGATCCAAGTCCAACGAATTTGAAAAATCCTTTAACACCAACGAATCCTTAACTAATTCAAGAGGCTCCTTCAACAAGACCTTATCAACTGTAATTGAGAGATTTCCAAGAAGAGAATCTTGAATTTCAATGGCACCCGGGATGAAACCACAAAGATTTCTTCTAACCTTGATGTGTGCTTCAGAAGCATCAAGGAAATTCATAGTATCAACTGCTATTTCCTCTAAACCCCCAAAGTGCTGTCCAATTACTTCAAAAACCTTCCTAGTCCAAAACTTAAGTGGCAAGTTTTGAACTGAGATCTAACCTCCATACCCTTTAATGAATTCAGGAATACTATGAAGTTTATCACACCAACGCTCAATTTTCAAATGAAAGGGCTCTATCAATTGCCACTTGCCAAAAATGAGAACTTGTTTCTCAACTACACCTTCATCCACAATGACTAAGGCTTTGTCTGCCATGAAAGGATTGATTTGGATCTTCACACTGAAAAAAGATTCCAGAACTTCCTTTATCTCCCTCCACTCAATATGGGCAAACAATTTCGACACAACCAGCAACTTATCAAAGTTCAAACCCACCACCTCGTGAGACTTCTGAACCCAAAAAGAAGAGATCGAACGACCATAGCCTTTTTGAACTACTGACGATGCCTCCGCTCCCCACCTAACAGCTTTCTCGAACACTGATCAAACTCGGAAGCTCCAACCAAATGAGGTAAAGGAGTGTCAAGCCCATGAGAAACCAACTATTCTAGACTTTGAAGGAAGTCAGCAGTCATTTGCCAAACACTGGCGAACCTTTCTTATGAACTCCTAGCGATACATTAAGGAAATTTCTAACACCAGAGGGAGGCCATACAACACTTTGAGCAACCCAACCCAGTCATTTGCCAAACACTAGCGAACCTTTCTTATGAACTCCTAGCGATACATTAAGTTGTAATTTACGCAAGCGAGCGCTTGCGCCAAAGGCGATGATGCTGCCGACGCCTGATTGAAGGCCATCGCCTGGTATGTTAGGAGGCACACTTCCCCTAAATCACGTCGCCCGACGCCTGATGCGAGCACCTTTGTGCGCCTCGAAAACACTGGTTATAGTTACCAATCATATATTAGGATGAATCTCAACTATTATTAATTAATTATGAACATGGTATATGCTATAAATTTTGTATAATTATTATTTTACGTCATATAATTTATGATAATATTACGCATTTTAATTTAACAACATTAAAATGAGTTTATGACATGAAATACTATATTTATCAAAGTTTTTAATGTTTTTAATGAAATTCTACATTTTAAAATTTGAAATTTAGAATTTAGGTACATTGAAAACATAAAAATGTTGTTTTTGAATTTTACTATTTATATCACAAAACCCAAAATAGTTTTAGAAAACAAATATGCCAAACAGATATTCGTTGGATCTATTTGATTTAATGAATCTGAAACATAAAACATAATTCAGATTGCAGACCAAGCATGCCCTAAGATTCTTAGAATGGTTAATGTGGTGACTATATGAATGTTTGTGGCATTTTATGGTCTCCAATTACAAACATGCATGAACTTTCATCAGTCATCAGAAGTATGCCTAGAGAAAATTCTTATTTCTCACTCTACACTTGTTGATTGTCATGAAAGCAACTATGTTGCTTTTGACTTATTGTTGCCATATTGTACATTCTTCTGGGGCAATATAAATTTTCTGGTTTTTCAAATCTCGCTGAAGAATCATCCACATTTCCAGTTTTCATTGTTAACAGACATGTTCATGGCTTATTTCTTTATTGCGTTTGTCCAGGTATCTTTCAGAAAATCATCTTTGGAAAAAGCAACTGGCATATTTGGCATTTTAGCAAAAGTGAGTGTTTAAGATGTTCTTCTTAATGTTGACAGATCTGTATTTGTATATACTCATTAAAACATGCTTATTTTTTTGTACCATTGCTTTAGTATATATTTCGGACTGATAAAATTTCTATATCTCTGCAGTACTACAAACTCTATTTGAATCTACTGACTGTACCACTATTTTTTATTGGTTACTGTATTCCTCAGGTACGTTTTTCATTATTCTTTGAAGTGGAATTTTTAATTTTGTCTAAAATTTTACCATTCTGTTAGTATTTACTGGAAGCATTTTGACTTCATAGATGTCACATATGTATACTCATTTAAGATTTGTCTACGAGGATTCTATTCCACTTTTACGGAGCATTTAAGGCTTTCTTAATTTATAGTGTACTTTGTTTCAACTCTTTTGGCTGCGCTGGAAATCAATATTTAATTTTTGGTTGATACGGTGCCCAATTATTTTGTTATTTTTTTAATAAAA

mRNA sequence

ATGTCACTTGATCACCATCCTGGATTTGACTGTGGTGGTGCTTTATGGTTCCAAAATCTGACAGAGTATCCACACGGAGTTCTAGGCCCCATATTTCCATTTCTAATTGCCAGCTTGCACTTCATTAATGTTCAGGTATCTTTCAGAAAATCATCTTTGGAAAAAGCAACTGGCATATTTGGCATTTTAGCAAAATACTACAAACTCTATTTGAATCTACTGACTGTACCACTATTTTTTATTGGTTACTGTATTCCTCAGGTACGTTTTTCATTATTCTTTGAAGTGGAATTTTTAATTTTGTCTAAAATTTTACCATTCTGTTAGTATTTACTGGAAGCATTTTGACTTCATAGATGTCACATATGTATACTCATTTAAGATTTGTCTACGAGGATTCTATTCCACTTTTACGGAGCATTTAAGGCTTTCTTAATTTATAGTGTACTTTGTTTCAACTCTTTTGGCTGCGCTGGAAATCAATATTTAATTTTTGGTTGATACGGTGCCCAATTATTTTGTTATTTTTTTAATAAAA

Coding sequence (CDS)

ATGTCACTTGATCACCATCCTGGATTTGACTGTGGTGGTGCTTTATGGTTCCAAAATCTGACAGAGTATCCACACGGAGTTCTAGGCCCCATATTTCCATTTCTAATTGCCAGCTTGCACTTCATTAATGTTCAGGTATCTTTCAGAAAATCATCTTTGGAAAAAGCAACTGGCATATTTGGCATTTTAGCAAAATACTACAAACTCTATTTGAATCTACTGACTGTACCACTATTTTTTATTGGTTACTGTATTCCTCAGGTACGTTTTTCATTATTCTTTGAAGTGGAATTTTTAATTTTGTCTAAAATTTTACCATTCTGTTAG

Protein sequence

MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIFGILAKYYKLYLNLLTVPLFFIGYCIPQVRFSLFFEVEFLILSKILPFC
Homology
[Close]
BLAST of Tan0004291 vs. ExPASy Swiss-Prot
Match: Q8L718 (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 9.2e-29
Identity = 54/87 (62.07%), Postives = 70/87 (80.46%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLD HPGFD GG LWFQNL++ P G  GP+FP LIA+ H+IN+Q+SF  S++ + TG+ 
Sbjct: 190 MSLDGHPGFDSGGVLWFQNLSDLPGGSFGPVFPILIATFHYINIQISFDTSTIRQTTGLT 249

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           G+L +YYKLYL +L+VPLFF+GY IPQ
Sbjct: 250 GLLMRYYKLYLEILSVPLFFVGYAIPQ 276

[Close]
BLAST of Tan0004291 vs. ExPASy Swiss-Prot
Match: Q0WUC5 (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.1e-25
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLDHHPGFD GGALWFQNLTE P+G+ GP+FPFLIA LH+ N Q++F  SS+ K    F
Sbjct: 230 MSLDHHPGFDSGGALWFQNLTEIPNGLYGPLFPFLIAGLHYTNTQITFTASSVHKVDK-F 289

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
             LAK YK +LNLLT  L+F+ + +PQ
Sbjct: 290 TELAKAYKTFLNLLTCALYFLSFQMPQ 315

[Close]
BLAST of Tan0004291 vs. NCBI nr
Match: XP_022144503.1 (ALBINO3-like protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 8.3e-43
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLI+SLHFINVQVSFRKSS+EKATGIF
Sbjct: 236 MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLISSLHFINVQVSFRKSSIEKATGIF 295

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 296 GILAKYYKLYLNLLTVPLFFIGYCIPQ 322

[Close]
BLAST of Tan0004291 vs. NCBI nr
Match: XP_022973910.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 5.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. NCBI nr
Match: XP_022973911.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 5.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. NCBI nr
Match: XP_022933145.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 181.0 bits (458), Expect = 5.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. NCBI nr
Match: XP_022933144.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 181.0 bits (458), Expect = 5.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match: A0A6J1CTF9 (ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014174 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.0e-43
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLI+SLHFINVQVSFRKSS+EKATGIF
Sbjct: 236 MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLISSLHFINVQVSFRKSSIEKATGIF 295

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 296 GILAKYYKLYLNLLTVPLFFIGYCIPQ 322

[Close]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match: A0A6J1I9X8 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match: A0A6J1ICK0 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match: A0A6J1F440 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match: A0A6J1EYX9 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSL+HHPGFDCGGALWFQNLTEYPHGVLGPIFP L+ASLHFINVQVSFRKSSLEKATGIF
Sbjct: 237 MSLNHHPGFDCGGALWFQNLTEYPHGVLGPIFPLLVASLHFINVQVSFRKSSLEKATGIF 296

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           GILAKYYKLYLNLLTVPLFFIGYCIPQ
Sbjct: 297 GILAKYYKLYLNLLTVPLFFIGYCIPQ 323

[Close]
BLAST of Tan0004291 vs. TAIR 10
Match: AT1G65080.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 127.5 bits (319), Expect = 6.6e-30
Identity = 54/87 (62.07%), Postives = 70/87 (80.46%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLD HPGFD GG LWFQNL++ P G  GP+FP LIA+ H+IN+Q+SF  S++ + TG+ 
Sbjct: 190 MSLDGHPGFDSGGVLWFQNLSDLPGGSFGPVFPILIATFHYINIQISFDTSTIRQTTGLT 249

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
           G+L +YYKLYL +L+VPLFF+GY IPQ
Sbjct: 250 GLLMRYYKLYLEILSVPLFFVGYAIPQ 276

[Close]
BLAST of Tan0004291 vs. TAIR 10
Match: AT3G44370.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 114.4 bits (285), Expect = 5.7e-26
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 1   MSLDHHPGFDCGGALWFQNLTEYPHGVLGPIFPFLIASLHFINVQVSFRKSSLEKATGIF 60
           MSLDHHPGFD GGALWFQNLTE P+G+ GP+FPFLIA LH+ N Q++F  SS+ K    F
Sbjct: 230 MSLDHHPGFDSGGALWFQNLTEIPNGLYGPLFPFLIAGLHYTNTQITFTASSVHKVDK-F 289

Query: 61  GILAKYYKLYLNLLTVPLFFIGYCIPQ 88
             LAK YK +LNLLT  L+F+ + +PQ
Sbjct: 290 TELAKAYKTFLNLLTCALYFLSFQMPQ 315

The following BLAST results are available for this feature:
BLAST of Tan0004291 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L7189.2e-2962.07ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 ... [more]
Q0WUC58.1e-2562.07ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 ... [more]
BLAST of Tan0004291 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144503.18.3e-4397.70ALBINO3-like protein 2, chloroplastic [Momordica charantia][more]
XP_022973910.15.4e-4296.55ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima][more]
XP_022973911.15.4e-4296.55ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima][more]
XP_022933145.15.4e-4296.55ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata][more]
XP_022933144.15.4e-4296.55ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata][more]
BLAST of Tan0004291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CTF94.0e-4397.70ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1I9X82.6e-4296.55ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1ICK02.6e-4296.55ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1F4402.6e-4296.55ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1EYX92.6e-4296.55ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 G... [more]
BLAST of Tan0004291 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G65080.16.6e-3062.07Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain [more]
AT3G44370.15.7e-2662.07Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12428:SF53ALBINO3-LIKE PROTEIN 3, MITOCHONDRIALcoord: 1..87
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004291.1Tan0004291.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033617 mitochondrial cytochrome c oxidase assembly
biological_process GO:0032979 protein insertion into mitochondrial inner membrane from matrix
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0032977 membrane insertase activity