Tan0004280 (gene) Snake gourd v1

Overview


Name	Tan0004280
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Chaperone protein dnaJ 8
Location	LG04: 83794585 .. 83796339 (+)
RNA-Seq Expression	Tan0004280
Synteny	Tan0004280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATCTCTCCTCATTTACCACCAAACCCCTGGTAAAAAGTAAAAAGATTAAAAAAAAAAGAGTTGGAATGGAAACATGACAAAAAGAAAAGGGTAAAAATAGGGAAAAGGTGAGTTGAGGATGACTAGGACCAATTATACAAAGAAACATAACAGATAAGAACATGATTCTCTCTCCTCGACTCCATCTCTACGGGACACGTCATCTTCTCTCTCTAGAATTCGGCCCACTGGATAAGGACCGACGATCTCGCCTCTCCACACCCTCCGAATCTATAATCTAAAATCCCCTTCTATTTATTCCCCCCTTTTCCCCTTCTCCCAATTCCTCCAATATCCATTATCAAAATCATCCTTCTTCTTCTTCTTCTTCTTGTTAATGGCGTCCGTCTCTACTGCTGGAATCATCGGCCGGGCCGGTTCTTCCTCATCCTCGTCGTGGATTCGCCAACGAAATCGGCCGAACAAGAATCATCGATCTTCGACGAATCAAGTTAGGGTTTCTTGTTCTTCTTATTCCTCTTCTTCTACGGTCGATCCTTACCAGACTCTTCGGATTCGCCCTGGCGCCTCTGAATCCGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGGTTCGATTTCTCTCTCGATCTCTTCGACTCCTCTCTCTCTCTCCTTTCTGGATTTGTTCGTCTGATTGATTGAATTTGATCGATTTTTTTCAGTATCATCCCGACGTTTGCAGAGGAAGTAATTGTGGCGTGCAATTTCATCAAATCAATGAAGCTTACGATGTACGCGATCGAAGCCCTAATTAATTATGCTTCTCTTCTTTTTTTTTTTTCCTATTAAAGTATATATATATTAAAATCGGATCAATTATTGGAATCGTTTTTGTTTAAAAATAATTGAGCAGCTTGGAAAATAACTAATTATGAATTATGAATTTTTGGTCAAAATAATTTGAATTTGACTGTTTCTTTGGGCTTCTTTTATTTGATTTATATCGTGTGAAAGGGAGTGTGTGGGTTAGGTTCATGTCGGTTTCATAGACTCCTGATACTTCTAATATTGAATTTGCTATAATTATTTGTCATCGTGTCCTTTTCATATTAGTCAAATCAATATGGTAAAATTGGTCTAATAAGTTGAAATCTATTTCGTGGTAAATTAGTTTAGGCATATATCATCGACCACAGTTATAATAAAATCTAATAACGTCTAAACACAGACTATTATAATTATTACAGACTAACCATGATATTATAAGTTTCAAACCACTCTAATTTTTTTACTTCTTATTAATAATTTTATGTTTTTGTTAAACAGATGGTGATGAATAATTTAAGAGGTATATCGACGCCAATCGAGACGTACGAGACATACGACGAAGGGGTCGATGAGCCGATGAGAGGAATGGAGGATCCCGATTGGGATATGTGGGAGGAGTGGATGGGATGGGAAGGAGCAGGGATCCGAGATTATTCGTCACATATCAATCCGTACATTTAAATTGAAATTCATGTGAATAAACTTATTTTTGTTAATAGAATTGGTCCCTAATCTATCAACATCATCCAATGGTGGTGGTTGTTGCTTGTGCATATGATGTAAAGAGGGAATGATTGAAAAATTGGTCCTATTTTGATGTGCCCCCTTTTTTTTTCAAATGTTTTTGTACATATGGTCAAGACAAAAGGCCTTTGGGTTTTAATAAAATATGAAAAGGCTTTCAAGATGCCCTATTAAAATTTGTGGGACATTTGTGTTT

mRNA sequence

GACATCTCTCCTCATTTACCACCAAACCCCTGGTAAAAAGTAAAAAGATTAAAAAAAAAAGAGTTGGAATGGAAACATGACAAAAAGAAAAGGGTAAAAATAGGGAAAAGGTGAGTTGAGGATGACTAGGACCAATTATACAAAGAAACATAACAGATAAGAACATGATTCTCTCTCCTCGACTCCATCTCTACGGGACACGTCATCTTCTCTCTCTAGAATTCGGCCCACTGGATAAGGACCGACGATCTCGCCTCTCCACACCCTCCGAATCTATAATCTAAAATCCCCTTCTATTTATTCCCCCCTTTTCCCCTTCTCCCAATTCCTCCAATATCCATTATCAAAATCATCCTTCTTCTTCTTCTTCTTCTTGTTAATGGCGTCCGTCTCTACTGCTGGAATCATCGGCCGGGCCGGTTCTTCCTCATCCTCGTCGTGGATTCGCCAACGAAATCGGCCGAACAAGAATCATCGATCTTCGACGAATCAAGTTAGGGTTTCTTGTTCTTCTTATTCCTCTTCTTCTACGGTCGATCCTTACCAGACTCTTCGGATTCGCCCTGGCGCCTCTGAATCCGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGTATCATCCCGACGTTTGCAGAGGAAGTAATTGTGGCGTGCAATTTCATCAAATCAATGAAGCTTACGATATGGTGATGAATAATTTAAGAGGTATATCGACGCCAATCGAGACGTACGAGACATACGACGAAGGGGTCGATGAGCCGATGAGAGGAATGGAGGATCCCGATTGGGATATGTGGGAGGAGTGGATGGGATGGGAAGGAGCAGGGATCCGAGATTATTCGTCACATATCAATCCGTACATTTAAATTGAAATTCATGTGAATAAACTTATTTTTGTTAATAGAATTGGTCCCTAATCTATCAACATCATCCAATGGTGGTGGTTGTTGCTTGTGCATATGATGTAAAGAGGGAATGATTGAAAAATTGGTCCTATTTTGATGTGCCCCCTTTTTTTTTCAAATGTTTTTGTACATATGGTCAAGACAAAAGGCCTTTGGGTTTTAATAAAATATGAAAAGGCTTTCAAGATGCCCTATTAAAATTTGTGGGACATTTGTGTTT

Coding sequence (CDS)

ATGGCGTCCGTCTCTACTGCTGGAATCATCGGCCGGGCCGGTTCTTCCTCATCCTCGTCGTGGATTCGCCAACGAAATCGGCCGAACAAGAATCATCGATCTTCGACGAATCAAGTTAGGGTTTCTTGTTCTTCTTATTCCTCTTCTTCTACGGTCGATCCTTACCAGACTCTTCGGATTCGCCCTGGCGCCTCTGAATCCGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGTATCATCCCGACGTTTGCAGAGGAAGTAATTGTGGCGTGCAATTTCATCAAATCAATGAAGCTTACGATATGGTGATGAATAATTTAAGAGGTATATCGACGCCAATCGAGACGTACGAGACATACGACGAAGGGGTCGATGAGCCGATGAGAGGAATGGAGGATCCCGATTGGGATATGTGGGAGGAGTGGATGGGATGGGAAGGAGCAGGGATCCGAGATTATTCGTCACATATCAATCCGTACATTTAA

Protein sequence

MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYETYDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI

Homology

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BLAST of Tan0004280 vs. ExPASy Swiss-Prot
Match: Q9SAG8 (Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.8e-43
Identity = 93/155 (60.00%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 7   AGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRIRPGASE 66
           +G+ G + SSSSSS+ R +N   KN +   N+ +V CS  SSSS +DPY+TL+IRP +SE
Sbjct: 13  SGLPGSSFSSSSSSF-RLKNSRRKNTK-MLNRSKVVCS--SSSSVMDPYKTLKIRPDSSE 72

Query: 67  SEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYETYDEGVD 126
            EVKKAFRQLA +YHPDVCRGSNCGVQF  INEAYD+V+  ++      E +E +D   D
Sbjct: 73  YEVKKAFRQLAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDV-YD 132

Query: 127 EPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPY 162
           E + GM DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 133 EGLNGMNDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of Tan0004280 vs. ExPASy Swiss-Prot
Match: O66921 (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 25/58 (43.10%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 47  SSSSTVDPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMV 105
           +SS+  D Y+ L +   AS+ E+KKA+R+L  +YHPD+C+   C  +F +INEAY ++
Sbjct: 2   ASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVL 59

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BLAST of Tan0004280 vs. ExPASy Swiss-Prot
Match: Q9KJT8 (Chaperone protein DnaJ OS=Peanut witches'-broom phytoplasma OX=35772 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 24/90 (26.67%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 53  DPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGIS 112
           D Y+ L +   A   ++KKA+R+L+ +YHPDVC+ +N   +F ++ EA+D++ N  +   
Sbjct: 6   DYYEVLELSRDAKLDDIKKAYRRLSKKYHPDVCKEANADAKFKEVQEAFDVLSNTNKRAQ 65

Query: 113 TPIETYETYDEGVDEPMRGMEDPDWDMWEE 143
                +   ++G +   +G +  +++ +E+
Sbjct: 66  YDQMGHNFNNQGFNSDFQGFQSANFEEFED 95

[Close]

BLAST of Tan0004280 vs. ExPASy Swiss-Prot
Match: A7NS65 (Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 53  DPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMV 105
           D Y+ L ++  AS+ E+KKAFR+LA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

[Close]

BLAST of Tan0004280 vs. ExPASy Swiss-Prot
Match: A5UYW4 (Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 53  DPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMV 105
           D Y+ L ++  AS+ E+KKAFR+LA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

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BLAST of Tan0004280 vs. NCBI nr
Match: XP_038906426.1 (chaperone protein dnaJ 8, chloroplastic [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 145/164 (88.41%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSS--SSTVDPYQTL 60
           MASV+TAG I R+GSSSSSSWIR RNRP K+ +SSTNQ+RVSCSS SS  SS VDPY+TL
Sbjct: 1   MASVATAGFIARSGSSSSSSWIRHRNRPKKD-QSSTNQLRVSCSSSSSSPSSVVDPYRTL 60

Query: 61  RIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETY 120
           RI+PGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETY
Sbjct: 61  RIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETY 120

Query: 121 ETYDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           ETYDEGVDEPMRGMEDPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 ETYDEGVDEPMRGMEDPDWDLWEEWMGWEGAGIRDYSSHINPYI 163

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BLAST of Tan0004280 vs. NCBI nr
Match: XP_023525914.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6606847.1 Chaperone protein dnaJ 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036551.1 Chaperone protein dnaJ 8, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73
Identity = 140/162 (86.42%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRI 60
           MASVSTAG I R G   SSSWIRQRNR NK HRSS NQVR S SSYSSSS  DPY+TLRI
Sbjct: 1   MASVSTAGFIARTG---SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRI 60

Query: 61  RPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYET 120
           +PGASESEVKKAFRQLALQYHPDVC+GSNCGVQFHQINEAYD+VMNNLRGIS PIETYET
Sbjct: 61  QPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYET 120

Query: 121 YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           YD+G DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of Tan0004280 vs. NCBI nr
Match: XP_022949473.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 8.8e-73
Identity = 139/162 (85.80%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRI 60
           MASVSTAG I R G   SSSWIRQRNR NK HRSS NQVR S SSYSSSS  DPY+TLRI
Sbjct: 1   MASVSTAGFIARTG---SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRI 60

Query: 61  RPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYET 120
           +PGASESEVKKAFRQLALQYHPDVC+GSNCGVQFHQINEAYD+VMNNLRGIS PIETY+T
Sbjct: 61  QPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYDT 120

Query: 121 YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           YD+G DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of Tan0004280 vs. NCBI nr
Match: XP_008465135.1 (PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 chaperone protein dnaJ 8 [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-68
Identity = 138/164 (84.15%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASVSTAGIIGR-AGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLR 60
           MASV+TAG I R + SSSSSS IR  NRP KN R+S+NQ+RVSCS  SSSS  DPY+TLR
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKN-RTSSNQLRVSCS--SSSSVADPYRTLR 60

Query: 61  IRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYE 120
           I+PGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETYE
Sbjct: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120

Query: 121 T-YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           T YDEG+DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of Tan0004280 vs. NCBI nr
Match: XP_022998499.1 (chaperone protein dnaJ 8, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-68
Identity = 138/163 (84.66%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MASVST-AGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLR 60
           MASVST AG I R G   SSSWIRQRNR NK HRSS NQVR S SSYSSSS  DPY+TLR
Sbjct: 1   MASVSTAAGFIARTG---SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLR 60

Query: 61  IRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYE 120
           I+PGASESEVKKAFRQLALQYHPDVC+GSNCGVQFHQINEAYD+VMNNLRGIS PI   E
Sbjct: 61  IQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPI---E 120

Query: 121 TYDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           TYDEG DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 TYDEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 157

[Close]

BLAST of Tan0004280 vs. ExPASy TrEMBL
Match: A0A6J1GC69 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452806 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 139/162 (85.80%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRI 60
           MASVSTAG I R G   SSSWIRQRNR NK HRSS NQVR S SSYSSSS  DPY+TLRI
Sbjct: 1   MASVSTAGFIARTG---SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRI 60

Query: 61  RPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYET 120
           +PGASESEVKKAFRQLALQYHPDVC+GSNCGVQFHQINEAYD+VMNNLRGIS PIETY+T
Sbjct: 61  QPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYDT 120

Query: 121 YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           YD+G DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 YDDGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of Tan0004280 vs. ExPASy TrEMBL
Match: A0A6J1KEH6 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493113 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.3e-69
Identity = 138/163 (84.66%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MASVST-AGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLR 60
           MASVST AG I R G   SSSWIRQRNR NK HRSS NQVR S SSYSSSS  DPY+TLR
Sbjct: 1   MASVSTAAGFIARTG---SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLR 60

Query: 61  IRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYE 120
           I+PGASESEVKKAFRQLALQYHPDVC+GSNCGVQFHQINEAYD+VMNNLRGIS PI   E
Sbjct: 61  IQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPI---E 120

Query: 121 TYDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           TYDEG DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 TYDEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 157

[Close]

BLAST of Tan0004280 vs. ExPASy TrEMBL
Match: A0A5D3DUL4 (Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00100 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.3e-69
Identity = 138/164 (84.15%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASVSTAGIIGR-AGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLR 60
           MASV+TAG I R + SSSSSS IR  NRP KN R+S+NQ+RVSCS  SSSS  DPY+TLR
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKN-RTSSNQLRVSCS--SSSSVADPYRTLR 60

Query: 61  IRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYE 120
           I+PGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETYE
Sbjct: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120

Query: 121 T-YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           T YDEG+DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of Tan0004280 vs. ExPASy TrEMBL
Match: A0A1S3CPN7 (chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.3e-69
Identity = 138/164 (84.15%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASVSTAGIIGR-AGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLR 60
           MASV+TAG I R + SSSSSS IR  NRP KN R+S+NQ+RVSCS  SSSS  DPY+TLR
Sbjct: 1   MASVATAGFIARSSSSSSSSSCIRNTNRPKKN-RTSSNQLRVSCS--SSSSVADPYRTLR 60

Query: 61  IRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYE 120
           I+PGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIETYE
Sbjct: 61  IQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYE 120

Query: 121 T-YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
           T YDEG+DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 TIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of Tan0004280 vs. ExPASy TrEMBL
Match: A0A6J1DIS3 (chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020908 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 135/162 (83.33%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MASVSTAGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRI 60
           MAS +TAGI+GR  +SSSSSWIRQRNR  KN R+S N +RVSCSS SSS   DPYQTLRI
Sbjct: 1   MASAATAGILGR-NASSSSSWIRQRNR-QKNDRTSRNSLRVSCSSSSSSYLTDPYQTLRI 60

Query: 61  RPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYET 120
           +PGASESEVKKAFR+LALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETY+ 
Sbjct: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYD- 120

Query: 121 YDEGVDEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 163
            +   +EPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 -ESYAEEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of Tan0004280 vs. TAIR 10
Match: AT1G80920.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-44
Identity = 93/155 (60.00%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 7   AGIIGRAGSSSSSSWIRQRNRPNKNHRSSTNQVRVSCSSYSSSSTVDPYQTLRIRPGASE 66
           +G+ G + SSSSSS+ R +N   KN +   N+ +V CS  SSSS +DPY+TL+IRP +SE
Sbjct: 13  SGLPGSSFSSSSSSF-RLKNSRRKNTK-MLNRSKVVCS--SSSSVMDPYKTLKIRPDSSE 72

Query: 67  SEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETYETYDEGVD 126
            EVKKAFRQLA +YHPDVCRGSNCGVQF  INEAYD+V+  ++      E +E +D   D
Sbjct: 73  YEVKKAFRQLAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDV-YD 132

Query: 127 EPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPY 162
           E + GM DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 133 EGLNGMNDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of Tan0004280 vs. TAIR 10
Match: AT1G72070.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 49  SSTVDPYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNL 108
           S  +  Y  L + P AS++EVK+AF++LAL+YHPDV +G +    F +I  AY+ +M   
Sbjct: 35  SPDLSHYTVLGLTPLASQTEVKRAFKRLALKYHPDVHKGQD--KDFKEIKSAYECLMQKF 94

Query: 109 RGISTPIETYETYDEGVDEPMRGMEDPDWDMWEEWMGWEG 149
           +                +E M   E  + D WEEWMG+EG
Sbjct: 95  K--------------KEEEEMEITEMGEIDEWEEWMGFEG 118

[Close]

BLAST of Tan0004280 vs. TAIR 10
Match: AT5G59610.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 54  PYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNN------ 113
           PY+ L + P A+  ++K+A+R+LAL+YHPDV + +N   +F +I  AY  ++N+      
Sbjct: 74  PYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQEKFLKIKHAYTTLINSDSRRKY 133

Query: 114 -----LRGISTPIETYETYDEGVDEPMRGMEDPDWDMWEEWMGWEGA 150
                  G ST  +T    +  V+E   G+ D   D+ EE+  WE +
Sbjct: 134 GSDSRATGSSTG-QTSRKGNSQVEEDFYGLGDFFKDLQEEYKNWEAS 179

[Close]

BLAST of Tan0004280 vs. TAIR 10
Match: AT5G59610.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 54  PYQTLRIRPGASESEVKKAFRQLALQYHPDVCRGSNCGVQFHQINEAYDMVMNN 108
           PY+ L + P A+  ++K+A+R+LAL+YHPDV + +N   +F +I  AY  ++N+
Sbjct: 74  PYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQEKFLKIKHAYTTLINS 127

[Close]

BLAST of Tan0004280 vs. TAIR 10
Match: AT3G05345.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-07
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0


Query: 31  NHRSSTNQVRV-SCSSYSSS---STVDPYQTLRIRPGASESEVKKAFRQLALQYHPDVCR 90
           N R ST+Q  + SC   +     S+  PY  L + P  S SE+K AFR    QYHPDV +
Sbjct: 18  NSRYSTSQRFIPSCRGKNREDPLSSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNK 77

Query: 91  -GSNCGVQFHQINEAYDMVMNNLRGISTPIETYETYD 123
            GSN  +   +I +AY+M+ N  R      E  + +D
Sbjct: 78  DGSNSDIMIRRIIQAYEMLTNYSRSEIIEGECLDPFD 114

The following BLAST results are available for this feature:

BLAST of Tan0004280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAG8	5.8e-43	60.00	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 ...	[more]
O66921	3.5e-08	43.10	Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=...	[more]
Q9KJT8	7.9e-08	26.67	Chaperone protein DnaJ OS=Peanut witches'-broom phytoplasma OX=35772 GN=dnaJ PE=...	[more]
A7NS65	7.9e-08	48.08	Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=...	[more]
A5UYW4	7.9e-08	48.08	Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 S...	[more]

BLAST of Tan0004280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906426.1	1.5e-75	88.41	chaperone protein dnaJ 8, chloroplastic [Benincasa hispida]	[more]
XP_023525914.1	4.0e-73	86.42	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG66...	[more]
XP_022949473.1	8.8e-73	85.80	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita moschata]	[more]
XP_008465135.1	1.7e-68	84.15	PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo] >TYK27005.1 ch...	[more]
XP_022998499.1	1.7e-68	84.66	chaperone protein dnaJ 8, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Tan0004280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC69	4.3e-73	85.80	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KEH6	8.3e-69	84.66	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3DUL4	8.3e-69	84.15	Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPN7	8.3e-69	84.15	chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 ...	[more]
A0A6J1DIS3	4.1e-68	83.33	chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Tan0004280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80920.1	4.1e-44	60.00	Chaperone DnaJ-domain superfamily protein	[more]
AT1G72070.1	3.0e-10	37.00	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.1	1.5e-09	32.71	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.2	1.1e-07	40.74	Chaperone DnaJ-domain superfamily protein	[more]
AT3G05345.1	2.4e-07	37.11	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 55..73 score: 39.65 coord: 73..88 score: 44.26 coord: 89..109 score: 22.28
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 52..109 e-value: 6.0E-18 score: 75.6
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 53..106 e-value: 1.2E-14 score: 54.2
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 53..122 score: 14.180381
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 53..102 e-value: 6.05464E-17 score: 68.3409
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 23..110 e-value: 4.8E-18 score: 66.9
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 34..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR24074:SF37	HEAT SHOCK PROTEIN BINDING PROTEIN	coord: 4..162
None	No IPR available	PANTHER	PTHR24074	CO-CHAPERONE PROTEIN DJLA	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004280.1	Tan0004280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus