Tan0004268 (gene) Snake gourd v1

Overview
NameTan0004268
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein-like isoform X3
LocationLG10: 10079782 .. 10080399 (+)
RNA-Seq ExpressionTan0004268
SyntenyTan0004268
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAACTTACTTACAGGGTTGGAGCGTTGGCTCTTGTTCTGGCATTGGTGGTTGTAGGATTGGCTGAAAGCCGGAAGTTGGAGAAGGAAACGTTTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGTGGGTATGGAAGTGGAGGTGGAGGTGGCCTTGGTATTGGTATTGGTTATGGGAAAGGTGGAGGAGCAGGAGGCGGACTTGGCGGTGGCGGTGGTGGCGGCCATGGCGGTGGCGGTGGATATGGAGGTGGTGATGACGAAGGAATCGGAGGCGGAATTGGGGCTGGCGGTGGCAGTGGATTTGGAGGCGGATCTGGAGGCGGGTATGGAGGTGGTAAAGGAATTGGATATGGAGGCGGAGGTGGCAGTGGATATGGAGGTGGCGCTGGCAGCGGGTTAGGAGGTGGCGGTGGCGCTGGCAGCGGATATGGTGGCGGATCTGGCGGTGGATATGGAGGCGGCTCTGGTGGTGGAGCTGGTGGTGGTAGAGGAGGCGGATCAGGTGGAGGAGGAGGCTATGGCAGCGGAGGTGGTGGTGGTAGAGGAGGCGGAGCAGGTGGAGGAGGAGGCTATGGCAGCGGTTCTGGTGGAGGAAGCGGTGGCAGAGTCTAA

mRNA sequence

ATGGCGAAACTTACTTACAGGGTTGGAGCGTTGGCTCTTGTTCTGGCATTGGTGGTTGTAGGATTGGCTGAAAGCCGGAAGTTGGAGAAGGAAACGTTTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGTGGGTATGGAAGTGGAGGTGGAGGTGGCCTTGGTATTGGTATTGGTTATGGGAAAGGTGGAGGAGCAGGAGGCGGACTTGGCGGTGGCGGTGGTGGCGGCCATGGCGGTGGCGGTGGATATGGAGGTGGTGATGACGAAGGAATCGGAGGCGGAATTGGGGCTGGCGGTGGCAGTGGATTTGGAGGCGGATCTGGAGGCGGGTATGGAGGTGGTAAAGGAATTGGATATGGAGGCGGAGGTGGCAGTGGATATGGAGGTGGCGCTGGCAGCGGGTTAGGAGGTGGCGGTGGCGCTGGCAGCGGATATGGTGGCGGATCTGGCGGTGGATATGGAGGCGGCTCTGGTGGTGGAGCTGGTGGTGGTAGAGGAGGCGGATCAGGTGGAGGAGGAGGCTATGGCAGCGGAGGTGGTGGTGGTAGAGGAGGCGGAGCAGGTGGAGGAGGAGGCTATGGCAGCGGTTCTGGTGGAGGAAGCGGTGGCAGAGTCTAA

Coding sequence (CDS)

ATGGCGAAACTTACTTACAGGGTTGGAGCGTTGGCTCTTGTTCTGGCATTGGTGGTTGTAGGATTGGCTGAAAGCCGGAAGTTGGAGAAGGAAACGTTTGGTGGTGGTGGCGGCAGTGGTGGTGGTGGTGGGTATGGAAGTGGAGGTGGAGGTGGCCTTGGTATTGGTATTGGTTATGGGAAAGGTGGAGGAGCAGGAGGCGGACTTGGCGGTGGCGGTGGTGGCGGCCATGGCGGTGGCGGTGGATATGGAGGTGGTGATGACGAAGGAATCGGAGGCGGAATTGGGGCTGGCGGTGGCAGTGGATTTGGAGGCGGATCTGGAGGCGGGTATGGAGGTGGTAAAGGAATTGGATATGGAGGCGGAGGTGGCAGTGGATATGGAGGTGGCGCTGGCAGCGGGTTAGGAGGTGGCGGTGGCGCTGGCAGCGGATATGGTGGCGGATCTGGCGGTGGATATGGAGGCGGCTCTGGTGGTGGAGCTGGTGGTGGTAGAGGAGGCGGATCAGGTGGAGGAGGAGGCTATGGCAGCGGAGGTGGTGGTGGTAGAGGAGGCGGAGCAGGTGGAGGAGGAGGCTATGGCAGCGGTTCTGGTGGAGGAAGCGGTGGCAGAGTCTAA

Protein sequence

MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV
Homology
BLAST of Tan0004268 vs. NCBI nr
Match: XP_022979923.1 (glycine-rich cell wall structural protein-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 148/209 (70.81%), Postives = 160/209 (76.56%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGAGGG 60

Query: 61  KGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYG 120
            GGG GGG+GGGGG G G GGG+GGG   G GGG G G G GFGGG+GGG GGG G G G
Sbjct: 61  FGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGGGAGGGAG 120

Query: 121 GGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYG 180
           GG G G GGG G G GG  GGGAG G+GGG+GGG GGG GGGAGGG GGG GG  GGG+G
Sbjct: 121 GGFGGGKGGGFGGGAGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFG 180

Query: 181 SGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
            G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGAGGGFGGGSGGGGGFGGGSGGGFGGRV 209

BLAST of Tan0004268 vs. NCBI nr
Match: XP_022979926.1 (glycine-rich cell wall structural protein-like isoform X6 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-10
Identity = 108/155 (69.68%), Postives = 118/155 (76.13%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGLGGG 60

Query: 61  KGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYG 120
            GGG GGGLGGG GG  G GGG+GGG   G GGG G G G G GGG GGG GGG G G+G
Sbjct: 61  FGGGHGGGLGGGAGG--GAGGGFGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFG 120

Query: 121 GGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGG 156
           GG G G+GGGAG G GGG G G G+GGGSGGG+GG
Sbjct: 121 GGKGGGFGGGAGGGFGGGSGGGGGFGGGSGGGFGG 153

BLAST of Tan0004268 vs. NCBI nr
Match: XP_022979922.1 (glycine-rich cell wall structural protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10
Identity = 148/217 (68.20%), Postives = 163/217 (75.12%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGLGGG 60

Query: 61  KGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYG 120
            GGG GGGLGGG GGG GGG G G G   G GGG+G G G GFGGG GGG+GGG G G G
Sbjct: 61  FGGGHGGGLGGGAGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAG 120

Query: 121 GGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG------- 180
           GG G G GGGAG G GG  GGG G G+GGG+GGG+GGG+GGGAGGG GGG+GG       
Sbjct: 121 GGFGGGAGGGAGGGAGGGAGGGFGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFG 180

Query: 181 ---GGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
              GGG+G G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGKGGGFGGGAGGGFGGGSGGGGGFGGGSGGGFGGRV 217

BLAST of Tan0004268 vs. NCBI nr
Match: XP_022979921.1 (glycine-rich cell wall structural protein-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-09
Identity = 151/229 (65.94%), Postives = 165/229 (72.05%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGLGGG 60

Query: 61  KGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYG 120
            GGG GGGLGGG         GGGHGGG G GGG   G GGG G G G GFGGG+GGG G
Sbjct: 61  FGGGHGGGLGGGAGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAG 120

Query: 121 GGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRG 180
           GG G G GGG G G GGGAG G GG      GGGAG G+GGG+GGG+GGG+GGGAGGG G
Sbjct: 121 GGFGGGAGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGHGGGAGGGFGGGAGGGAGGGFG 180

Query: 181 GGSGG----------GGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
           GG+GG          GGG+G G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGAGGGAGGGFGGGKGGGFGGGAGGGFGGGSGGGGGFGGGSGGGFGGRV 229

BLAST of Tan0004268 vs. NCBI nr
Match: XP_022955575.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 145/207 (70.05%), Postives = 161/207 (77.78%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60

Query: 61  YGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKG 120
            G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G GGG G GGG+GGG+GGGKG
Sbjct: 61  GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120

Query: 121 IGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYG 180
            G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G
Sbjct: 121 GGFGGGAGGGAGGGFGG--GAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGG 180

Query: 181 SGGGGGRGGGAGGGGGYGSGSGGGSGG 204
           +GGG G G G G GGG+G G+GGG+GG
Sbjct: 181 AGGGFGGGHGGGAGGGFGGGAGGGAGG 205

BLAST of Tan0004268 vs. ExPASy TrEMBL
Match: A0A6J1IXQ0 (glycine-rich cell wall structural protein-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479469 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-11
Identity = 148/209 (70.81%), Postives = 160/209 (76.56%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGAGGG 60

Query: 61  KGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYG 120
            GGG GGG+GGGGG G G GGG+GGG   G GGG G G G GFGGG+GGG GGG G G G
Sbjct: 61  FGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAGGGFGGGAGGGAGGGAGGGAG 120

Query: 121 GGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYG 180
           GG G G GGG G G GG  GGGAG G+GGG+GGG GGG GGGAGGG GGG GG  GGG+G
Sbjct: 121 GGFGGGKGGGFGGGAGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFG 180

Query: 181 SGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
            G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGAGGGFGGGSGGGGGFGGGSGGGFGGRV 209

BLAST of Tan0004268 vs. ExPASy TrEMBL
Match: A0A6J1IQ14 (glycine-rich cell wall structural protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479469 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 148/217 (68.20%), Postives = 163/217 (75.12%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGLGGG 60

Query: 61  KGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKGIGYG 120
            GGG GGGLGGG GGG GGG G G G   G GGG+G G G GFGGG GGG+GGG G G G
Sbjct: 61  FGGGHGGGLGGGAGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAG 120

Query: 121 GGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG------- 180
           GG G G GGGAG G GG  GGG G G+GGG+GGG+GGG+GGGAGGG GGG+GG       
Sbjct: 121 GGFGGGAGGGAGGGAGGGAGGGFGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFG 180

Query: 181 ---GGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
              GGG+G G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGKGGGFGGGAGGGFGGGSGGGGGFGGGSGGGFGGRV 217

BLAST of Tan0004268 vs. ExPASy TrEMBL
Match: A0A6J1IS46 (glycine-rich cell wall structural protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479469 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 151/229 (65.94%), Postives = 165/229 (72.05%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGGGAGGGLGGG 60

Query: 61  KGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYG 120
            GGG GGGLGGG         GGGHGGG G GGG   G GGG G G G GFGGG+GGG G
Sbjct: 61  FGGGHGGGLGGGAGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAG 120

Query: 121 GGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRG 180
           GG G G GGG G G GGGAG G GG      GGGAG G+GGG+GGG+GGG+GGGAGGG G
Sbjct: 121 GGFGGGAGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGHGGGAGGGFGGGAGGGAGGGFG 180

Query: 181 GGSGG----------GGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV 206
           GG+GG          GGG+G G GGG GGG+GGGGG+G GSGGG GGRV
Sbjct: 181 GGAGGGAGGGFGGGKGGGFGGGAGGGFGGGSGGGGGFGGGSGGGFGGRV 229

BLAST of Tan0004268 vs. ExPASy TrEMBL
Match: A0A6J1GVG5 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.4e-09
Identity = 145/207 (70.05%), Postives = 161/207 (77.78%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60

Query: 61  YGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKG 120
            G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G GGG G GGG+GGG+GGGKG
Sbjct: 61  GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120

Query: 121 IGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYG 180
            G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G
Sbjct: 121 GGFGGGAGGGAGGGFGG--GAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGG 180

Query: 181 SGGGGGRGGGAGGGGGYGSGSGGGSGG 204
           +GGG G G G G GGG+G G+GGG+GG
Sbjct: 181 AGGGFGGGHGGGAGGGFGGGAGGGAGG 205

BLAST of Tan0004268 vs. ExPASy TrEMBL
Match: A0A6J1GU56 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.4e-09
Identity = 145/207 (70.05%), Postives = 161/207 (77.78%), Query Frame = 0

Query: 1   MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIG 60
           MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G
Sbjct: 1   MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60

Query: 61  YGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGGYGGGKG 120
            G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G GGG G GGG+GGG+GGGKG
Sbjct: 61  GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120

Query: 121 IGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYG 180
            G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G
Sbjct: 121 GGFGGGAGGGAGGGFGG--GAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGHGGG 180

Query: 181 SGGGGGRGGGAGGGGGYGSGSGGGSGG 204
           +GGG G G G G GGG+G G+GGG+GG
Sbjct: 181 AGGGFGGGAGGGAGGGFGGGAGGGAGG 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022979923.11.2e-1070.81glycine-rich cell wall structural protein-like isoform X3 [Cucurbita maxima][more]
XP_022979926.11.2e-1069.68glycine-rich cell wall structural protein-like isoform X6 [Cucurbita maxima][more]
XP_022979922.16.0e-1068.20glycine-rich cell wall structural protein-like isoform X2 [Cucurbita maxima][more]
XP_022979921.12.3e-0965.94glycine-rich cell wall structural protein-like isoform X1 [Cucurbita maxima][more]
XP_022955575.11.9e-0870.05glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat... [more]
Match NameE-valueIdentityDescription
A0A6J1IXQ05.9e-1170.81glycine-rich cell wall structural protein-like isoform X3 OS=Cucurbita maxima OX... [more]
A0A6J1IQ142.9e-1068.20glycine-rich cell wall structural protein-like isoform X2 OS=Cucurbita maxima OX... [more]
A0A6J1IS461.1e-0965.94glycine-rich cell wall structural protein-like isoform X1 OS=Cucurbita maxima OX... [more]
A0A6J1GVG59.4e-0970.05glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch... [more]
A0A6J1GU569.4e-0970.05glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004268.1Tan0004268.1mRNA