Tan0004253 (gene) Snake gourd v1

Overview
NameTan0004253
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotrans_gag domain-containing protein
LocationLG04: 63781788 .. 63799591 (-)
RNA-Seq ExpressionTan0004253
SyntenyTan0004253
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGATTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTGTTCGGGCCAAGGTTCTAGTTCTAACACTATGAGTGACAAAACGAACCTCGAAAATGGTTTATAGGCTTGTATTAAGCTTATGAAAATGCAAGGTTTACTAAAACGAAATGGTTTCAATGCTTATTGTTTTCCTTTGAACACATGTTTATGAGTATTCATATTTTCTAAGAAATGATTTCAAGTGCTCGTTGTGAGCCTAAATGTCTTGATGAAATTTATATGTGAGCATATGTTCTTGATTTTCGAAATTTATGAAAATGTTATGATTTCGAGCAAGTATGTACTAGCAAGTATGATTTAAAGATTTCCAGTTTTAATGAACAAGCTGAGTAAGCTTGAGTTTTACGAAAGGAAAGATAAGCAGGCATGTTTAAATGTTTTTATGTGTTTTTCTTAGTCTTGAATGAGTAAATGACTGAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTCATTTTCTTTTGTCGACGTTGAGTGTACTCCATGACAACAATGCTGTCGTGAGTGTTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCATAGAGTAAACATTGGTTGTACAGGGCGTGCCCTACACAACGTGAATTGTGACATGTTTTAAAAGGATTTCTATCATTCATATGCCTTACGAGATTTTAACGACATACTTGCTGGTTTTTCTGAAAAACTATTATGATTACACAGTTACTTTTAATGCTTGATTACAGATGCATATGCTCATAGATGGTCAGGTGATATGATTTACGAGTTAATAGTTTTCTTTTAAACTCAAGTCACTCACTGAGCTTCATAGCTCATTCTTTTAGTGGTTTCAAATTTTTCAGGTGGTGATCGAGCTCCCGGTGCCTGATAACCTGCCATAGTCTGCTGGAAGCTCCATAAGTTTGATATTTTGTACGTGGTTGGTTTTGTATAGCAAGTCCATGTGTGTTAAAGTTAATTTTGAGGGGACTATGTAGTTATAGTTGTATGTGCTTTAGAGGTTGTGTAATTAATGGTTTGGCATGTTTATGGCTCTGATGATCTTGCCCGTTTTAGTCTTCAAGGGAGTCTTAAGTAGAGTTATTCCTTAGGTAGGTTACGTAATTGTCAATATTCCGTTGTGTTATGTTTAGAGTGTTTCCTATACAAGTATAGTATGCTTATCAGGTAAAGCAGGGTCAACAGGTATCGTTAGGGAGGTGAACGATGTCTGTTGGCTTCACGCCGTCTGTCGGACTAAGTTAGCTGGTAGCTTGGGAGGGGGTGTGACAGCTTGGGTCAACTCCTCCCAAGAGGTGATATTGCCTGGTAGGAGAGACTCTAGTCATTCCTTAGCCATGCAAAGATAAAGGAAAAAGACGTAAGCGAATACTATCAGCAGCGATACCATTTAATTAAATTGTACCACAAATTTCTAGAAAATTTTGCAAATGTGAATTAAGATCTTATGTGGCTTGCCTCGAAAAGCACCTTCCCTAACCATCTGAATAAGCCCTGTTTTTAGTTCAAAATTGTTAGTATTTATGGGAGCATGGACAATTCCAGCTTGCTCAGAATTAAACACAGGTTGGAAATACTCCCTGATGGGTTTAGGGTTGTTGATTAAATCCTGATTTGCCATTATCTGAGTTTCTGTTCATCCTTGCCATAGGAGTCTCCTACATGTCCTTTCAATCTCAAGATCAAAATGGTGCAAGTCTGCAGCTCTATCCTTGGTCATACACCTGGAGGTACAAAAAAAAAAAGAATTAGGCAACAAAACTAGGAAAGGAAAGAAAACATAAAAAGAAAGAAAACACAATAAAGAAAATAAAACAGAGAACTAAAACATAAACTTGGGTTGCCTCCCAAGATGCGATTTCTTTAACGTCTTTAGCTAGACGGTGACTTATGATTGACATTAAGGCATGTAAAATTGCTCGTATTTCTTCGGGCCCTTCTTGCTTGAATCGATATAGCCTTCTAAGTCTAAAATGCTATCTTGTTTTTCCTGAGCACTTGAGAGATAATTATTTTTGGTATTTGTGTGTATTGAAATAAAAGAACAAAAATAAAAAAAAATAAAAAAGACTCGTGAGTATAGGACAAATGGTTGTCAATATTAAAGGAAATTTCTGGAGATAAAAAGGGAAAAGACTTTTCAGCCTCGAACTCTATCACCTGAATTTCCTCCGTGGAAGTGATTGCATTACCATTGTCTACCTCACTAACCTGTTTCTGGTGTGTTTCAGTCTCCTCCAACTCATCTTCACTATCATACGAATAAGTCCTCTTAGGCCAGGGGTAAGAATAAGAAACTGTTCCTGTAAGGCTTTAAGGGAATTTACCAGTTGATTGAGATAATGAGTTCTTTCATGTACTATTTTCCAAAGCTCCACCACTTTAACCTCTAACCTATCCAACCTTTCTAAATCATCATGAACCAAATTTTTAATTTTCAACTCTAATGTATATTTCATTAATACGTCCACAAGAGAGGAGTTTTCTATAGGTTGGTTAGGGTACGAGACATTTTGGTTCCAAGTGCCTATATGATTACCATCAAAAGAATTTTCATCAATCATAAATTAAGAATGGTAAGGATTAGACAAATGGTATCCATAAAAATCATGATGCACATATCTGGGGTCCTGGGATGGACAGTACATTGGTGGAGAATCAAAATCATGAAAAGTCATACTTTAAATCTCATCAATTCAACTCAAGAATTTTACACAGAAATCAACACAACCAAAACAGGAGACAAATTGTAACGCCCCTACTTATATACAATACGTTCCTAGGGACATTACTACTCATGCATGCATTTGAGGCCCTAAATAACTTTAAATATTTAAAACTTGGTAATTTAAAGCACTTCAATTTGGGATCTCGTAATAATGCAAAACATTTCAAAACATAAATAAGTTCGGCCTCTAGTTTCAAACTTTTATAATACATAAGCAGAAAATGATAATCCTTAAAAATGCTATCTAAAACGTTTGTGCGGAAAACTATGACTTGGTTCTCATGGCTTCTGTAGCATATCCCCGTCACTCGCCTGGTATGCCCTCACCTTTACCTGAAAGCATTTTAAAAACGGAGAAAACAAAACAAAGGTAAAGGGATAAATATTGTAAAATACCCAGTAAGTGGAGGTCGAAAAATGCAAATACATGCACATGACTTCCTTTTAAACCTGACTTTTAAACATGACTATTATTCGTGATTTTTTTTTAAATCATAAAGCTTTCTGTAGTGGGACCTAAAACCTTCTTTCATAAAATCATAACTTTTTCTCTTTGGCTATACGTGGTCAATTGAGTCTACCTGAGTCTTTTCATATTGAGTCTCTCACAGACCCCTATAGGTTTTGAGTCTCTCACAGACCCCTATAAGAATTGAGTCCCTCACAGACCCCTATAAGTTTTGAGTCCCTCACAGACCCCTATAAGTTTGAGTCCCTCACATACTCCTATAAGTTCGACCCATAGGGTCTCTGATGTATGTTTTACCATGCATAAATTCTCAGGAGACCAATTGCCACAACCTACATAATATATTCATATACATACAATATGCATGAGGTCCCATATGTCACTCACACGTATATAGGCAGTCATAATGATGCAAAATCACATAATCATGGCATAACTTTCATAACTTTAAAACTTGAGTCAATCAATCATAAAGCATAAATACATTTACATTTTCAAATACGTATTCATTACAATGGCATAACTGAAAAGCTCACTATATATAAATATACATAACTGTGTCAAAACTTATTTTCAAATACTTTTTGAAATCATTTCTATTCGGGTCCTCTCAAACCCTTAAATCATTTGGGATCCTCTCAAAAAAAATTTAACCGTGCATTGAGGGTCCTCTCGAACCCTTTGGAGTAATAAATCTTGAGAAATCATTCTCAAAAGAAATCCTTGAGATTTATCTTTTTCAATAACTCATAAGATTCACCCTTTTGAAATAAAATTTTCAAATGCATACATGCTTCCCATTCTCAAATTCATTTATATAAACATCCCTTACCTTAGCTTGGCTTGAAACACCTAAAATTTCGCTCCTAAATCAAGTCTCCTCTCAAACTTGCTCGGTTCTCGAATTCCTTCAATCCGATACATTTTCCTAGTTAAAACACATCATAAATAACTTATTTTTTTGAATCCAATAAAAGATAAGTCGAATTACCACTAACAGATGCTGAAACCGACTCGGGGAGGCGAAACTGATAGGATCGAACACAGTCCGGTGAGCGGCGGCGCGGCGGCACATCTCGAACTGTGGAGCATACCGTTGGAATCCTCGTGGCTCTATTTATCCAAAACCGATCCTAGAACGTCAAAAACCGATCGAAAAGCTCCCTAAAAACCTGAGCAAAATTCAAACCAGTAATTTCAAGCCCTGACGCGAACGGCTTCCCGCGGCGCAACCACTCGATTCAAAGCTTCCATCTGCGGCGGTCGTCGACGTCCAGCGGCTGATGACCAGAAGTGGGGGCTGAAGATGGCGAAACACCCCTGCGATGGAGGTGGCGTTCGGCGATCGGCGACGACAGCACACCGAGGTGGCGGCCGGCGGACACGAGGCTTGGCGTGTGGACTCGCATGGACTTCACGCTACACGGCGAGAGGTGGCTGGCTGCGCGGCTTCACAGGGCGGCGGACGACTAGCTCATCGTGTGTGGCGACCAGCAACTGCGGTGGCGGCGCAACCCTGACGAACCGATCGAAGGTCTGGTGGCAAGGCTGGCGTTGCACGGTTGGAGTGAGGAAGGGGGAAGATGGATGTGCTTCGTAACGCGTGCCTAAAAGAATAAGGAACCCTAATTCTATTTCATTTACCAAAATGCCCCTCCTTCTTCTCATAAATTACAAGTGTGTCCTTAACTCTATTTAAGTGCTTCAAAATGTCCTTAATTACCCAAAATCACTCCAGTTGCATAAATTTATATTAAATTACAAAGCTTCAATGCCAAATTAATTTAATTCCTAATGAATTAATAAAAAACACAAATTGAGAGGTGTCTAAATTTCAGGGTCGTCACACAAATACTCGAAAAACACACAAAACTAAAATAAGGAACAAACAACAAACACACAAAGAACAATTAAGGAAAGACAACACAAACAAACTTTAGTCTAAAATCTCGAATTTTCTCCTAATATTAATTAATCTAAATAATCGTCATTCCCCGACAATGACGCCAAAAACTTGTTGCGTAAATTTAATAATGCAATACCGCAAGTGTACGGGTCAAGTTTTAGCATAGTGATTTGAGAGTTTCAAGTATCGTCCCCGGGAATGGGTTTCTAGATTAATTAATTACCAAGATACTAATTCTCAAATTTTAGCTAAAGTAACATAACATGGATAGATGGTGAAAACAAATACAAAAGATAACAAACAAGTGAAGACACGAATGTGATAGATTTGGAAGGAATTGACTTCACAAGTTAATAACTTATTTGACACATGCAATGAACTAATGTGATGAATTTATAAACAAGTAAGATACTAAAGAAAATCTCTCGATTCTTAGTGAGCCTCGCACACACAATAAATTCTATAGTCTCCATATGAATCTAAAAGCATGCACGACATTAAACAACTTCTTTATGTATTTCCCTTAGACTTCTAGGTCATTCTCATGCCAGACATCTAAGAGTTTTGATAACTTTGCTCTAATCTAAGTTTTTTCTCTCGAATCCACTTAAACCAACAAGATTAAAGAATTCAAGAACGAATTGTCAAAAATAAACAACAAAACATAATTCAATACATAAGCAAACAAGTCTTAAACATGTGACTCAAATTCTAACTACAATGTTTAGTCACTCTAAATCACAATAAAACCAAACTAAAAGTGTAGAAAACGTCTTAAAACGGTATTACAATCTGAAAGAAAAAGAAAATAAACTTATGTGTCGATGTCGGTCTCACGTCCTCGAGCTCCCGTCACAATTTCGATCCTCCATGAATGCTTTAACTCCCAAGGAATGCTCACTTTTCTCTTTTTACAGAGTGTATTTCGAAATTAGGGTGTAAAGACTATCAAATTCGGCTCCCTTTGCAAGAAGAAATCATGTTCTATTTATAAGTGTTTTCGGCACAGTGTTGCAACGCTAGTGACAGCGTTGCAACGTTGTGACCTAGGCAGGTATCAAATATGGGAAGTATCGGCAGTGTTGCAATGTTGCTACCTTAACGTGTGCGTCCTTATCGATCTGGCGTTGCAAAGCTAGCAAGTAGTGTTGCAACGCCCTCGCCACGGCTCTTCACGCTAATCTTCCAATCGAGATAGTGTTGCGACGCTGCAAAGCAGCGTTGCAACGCTATCAGCATGATCCTTCAACGCACAAAATCAGCAAGCTCGTCGTTGCAACGCCATCACCTCGGGTCCTCTAGCTTGGATTGGTCCTTCTACTTCCACTTGATGTTATTTTTTAGGGAGATCTGATCTCCTTGAGCAGCAGAAACGTGTTTGGGATCTTAATTACTTGATTGTTTTGCTTAAAACAAAAAACAGTACATTGACGAAAAATACAGAACAAGCATGGTATTTCTAATCCTATTCGACATGGATTAATTGCATACATGCAAACATATTTTTAACAATTAAAATAAAGAGAAGATAAAGAATACCTTTGTAGTTTCTCATGCAACTTGTTGCTCCAAAGGTTGTACAGCAAATCAATTGTACAGGGACTTCTCTGTTTTCTTCCAGCAAGAACACAACCACCAGAGATCACCTTCTATATCTCTGAGTGCTTAGATCCTCCTTGGTGGGAAGGATTCCAACTTTTGAAATAATTGAGAATTTTGAGAGTGAGAGAATTCTAGAGCAACAACAATTCTAAAAAATGCTTGAATGATCAATCGATCACCTGCTTCTTCCAACTCCCTACACTTAACGATAGGGAGTGGAGAAGAAACTGGTGAATGGGGAACGTGTCATCAACACGTTCCCCTCTTTTAATTAATTAAATAATTAAAAAACAAATATAATCTATTTAAATACTTAATTAATTCTTAATTAATTAATTTGAATATCTTATATTTCAAATAGATTATATGTATATGATTAAATCACATTTAATCATTAACCTATAGTTTTAATGTACATCCAGTGCACATTAAATTTTAACCTATAGTTTTTAAATATGAATCACATTCATATTTATATTTAATATTTGAACTCTTTCAAATATTTAACTCTCTCATACTATTAAATATGAATCATATTCACATTAAATTATAATATATAGTTCCAAAACCATATATTATATCGTATCATTATACATTGAATATATTCCCTAATGAATTTGAACATTTCAAATTCAAATGATCTAAGAACCCTTTACGAGCTAGAAGGTGGACCTAATGGACCTATAGATCAAAAGCTCCAACGATACGAGATTGCTCGGTTAATCTCATTAACCTCCCAATCAACATTCGTTAACTGCGGGAACACTCCACTAAACTCCCACAGCTGCACTCTTCTCACTGTAGATATATTTCTGTGTCCATGGATATTGACCAATAATGACAAGTCAATCCTTCATTTAATGTTCGTAACACCGGTGGGTCAAATTACCGTTTACCACAGGTTACATCTTGTACCTTAAGTACCAGTGTTCCTCTAATGAACAATTTGTTTGTGGTCCTACCAACAAATAGAGTCCCTATCGGGCCAATGAGAGGGTTGGGCCCTTTGTTCAAGTTCCGGAGACACCACTTGAGGGAACATTCCTCTATTACCCTAGTAGGCAGGAAGGAGTGAATTCCATCTTGCTAAGTTAAGTCCCCAGCCGCTCACTCGGTCTTTTCCCAAGAAGGTAGGCATATTGAGTCGGCGAATCTAGCCACTCTCACCCATACTAGTCAAAGGACAATCCCTCGCGAACAGAAATACGTAACCTGCTCAAGATTGAGATCAAGTTTCCTAGGTTATCCTAGTGAAATAGAAACCTAACTAGTCAACGGAGTTACAGCTAGAGGTTATTATTTCGTGGTCCGGTCTTATGTAATCTCATTACATAGGATATCCCCACTCACATGTCATCTACACGAAAACGTTAGGATCACAGTGTTTGTATCAAATACAAAGTGGGTCACATCCATAGTTTAACCAGGGTAAGGTACCCAAACCTTATCCCCTAACTATAGACCCTTTAGGTTGTATCTCGAACCGAGATCCTTTTTATGTACATTACATTCAGTTAAAGATTCATTTAACATCTTTGGATGTTTAGTTTATTGGATTTAGGGTTTAAATAAAGGCAAACTCGTAGATAACGAACAATAACACTTTATTGAAATTATAACTCTTTATTACAATAATTAGAACATAATTACAAACTACGAGTTTTAGGGAACAAATCCCAACAATTTTAAGCTCCAAAAAGCCTCGATTCGGTCCCGAGTAATCCATAATGTCTCCAAGTATCCTGTTTAAGTTCTTAACCTGAAATTCAATGATTAATACACATAAAAGCCATGAAATTATCATGAAGCTACCAATAATTAAGCCTAAGGATAGCACATTTTGTGTGCTATCAAACACCCCCAAACTCAAACTTTTGCTAGTCCCGAGAAAAAACAGAATTAAACATGAGATTGTTCTTATACATACATTTGATTTAAGCCTCAAAGATTTAAAAGGAAATTTTGGAAATTATAGGAAACCCTCAAACATAATACTTCAATGAGCAATTTAAAACTTTTCCTAAGTGTCCCCACGTGTGTGTGTGATTAGCCTATCTTCCATTCATTTTTACTAAGCTCGGATCAACTTTATTAGGCTCTACATTCAACTTCCCCCTACACTGGTCATAATTATAATCCTTGAGCCTCCCCACATTCAAGAAATAAATAACTCTACTCAGCACTTAATCACTTTTTATCTATTTTCTTCTTTTTTTGTGCAAGGACACTAGCTTTCACACATCCACTGCAGGGACCCTTACCCAGAGCACTCGCTCAATGAGTGGCCTAACTGATAACAGTGAAGGTAGCTCTTTTTGTCCTCGCGATTTTTTTTCTTAAACAAACAAACAACACAACAAACTTTTCCACAAAAGGCACATATTATACAGATCATGCACTTCATATTGTCATTCACCCTATCCTGCAGTTTAACTCTCAAATTAGTTCTTAGACCTATCGAGGTGATATCAAACTTCTAAACCTAATAACTTTGTTCTACGCATTTCAAAACTACAAGAACACAGGCTATGTGCATAATATTGCATGAAAAACTCAAGAAAAATTGTTAAATTAACTCAAATTCATATCATGCTCCCCAATTTCAGCAGAATCACAAAAATTTTCAATTAAATCTCATCCTAGGCTATCATAACCATACCTATGCAAAAGATCAATCAGCAATTCAGCATATATTCAGGACAGTCACAACATATCAATAACATCTCACCCTCAAACTAACTAAACATTGTCCCCAATGTTTGCAAAGTAAGCTCAAATCAAGTAAAAAGGGTAAGAGTAAACAATATTGTCCTGAGTAATGGAGATCTTCATTTTTTTTTCTAGATTCCTTGGATAGCCAAGACATGTGAGTTGATGTTCCACAGAACGGGAGCATGGGTTTCAACGAGGGGTGGCATCAACAACAACCTAAAAAAACAAAACAAAACAAACTACTAAGAAAACAACAAACAACCAAAAAAAACTAAACACAGAAAATAGAAATAACAAAAATGTAAGGCTTGGGTTGCCTCCCAAGAAGCGCTTTCTTTAACGTCTTTAGCTAGACTGTACTCCCTCAAGGTTTCTTTTTCCTATCTTGAAGCGCTCGAATGGATATATTCATTTGACTGATTTGGGTCTCAATATTCTTTATGGCAGCTCCATGACTGGTTACTACGCCAGTTAGACTGGTGACTGCATTTTCCAACTGGTTGGACCTATTTCTGGATTCAGCAATAAAGGAGTGCACTGTTTCCTCAAGAGATGGTTTCCTCTCAGATGTAGAAGCATACCCTGTAGGAGGATTCAACACATTTTTATTGTTACCATAAGATAAGTTTTCGTGATACCTCAAACCTGGATTATAATGTGTTGCAAGGGTATTCTGAGTTTGGTTTCCTCTATAAGTGTTGCTTCTGTTGTTCAGATAATGTATTTGCTCCAAAGTAGATTCTCCATTGGGTTGGGAGCATTGAGAGGGCATCACTGTTTGGGGTGATCCTGCAAAATTATTCAGAGCATGAGTGAGGGATGTCATATGTGATTTAAGGGAAGTTACCTCATCACATTGATACAATCCAGCTACTGGATTAGATCTGTCATTGTCTGTGGGCAATTGGTAGCTGGCAGTTGACACTTCCTCTAAGAGGGTACGTGCTTCTGGCAAAGTCTTTGCCATGAAAGCCCCTCCAGTAGTGGCATCCAGAATGGTCCTGGTCTTACCTGCAAGTCCATTATAGAATAATTGTACCTAGAGCCAATCTGGGTAACCATGTTGTGGACATCTCCTGAGCATGTCCTCATAATGGTCCCAGGCCTCAAATAGTTGCTCTCCCTCCTGCTGCCTGAATGTTCTCATCTATGTCCTTAACTTTACAGCTTTCACTGGTGGAAAGAATTTGGTCATGAAGGCTTGGGTCAACTCCTCCCAAGAGGTGATACTACCTGGTGGGAGAGACTCTAGCCATTCCTTAGCCCTACCCTGCAAAGAGAAAGGAAAAAGACGTAAGGGAATACTATCAGCAGAGATACCATTCAATTTAGTTGTACCACAGATTTCTAGAAAATTTTACAAATGTGAATTAGGATCTTATGTGGCTTGTCCTCGAAAAGCATCTTCCCTAAGCATCTGAATAAGCTCTGTTTTCAGTACAAAATTGTTAGCATTTATGGGAGTATGGATAATTCCAGCCTGCTCAGAATTAAACACAGGTTGGAAATACTCCTTGATGGGTTTAGGGTTGTTGATTAACTCCTAATTTGCCATTATCTGAGTTTCTGCTCTTCCTTGCCTTAGGAGTCTCCTACAGGTCCTTTCAATCTCAAGATCAAAAGGGTGCAAGTCTGCAGCTCTATCCTTGGGCATACACCTGGAGGTACAAAAAAAAAAAGAAATTAGACAACAAAACTAGGAAAGGAAAGAAAACATAAAAAGAAAGAAAACACAATAAAGAAAATAAAACAGAGAACTAAAACATAAACTTGGGTTGCCTCCCAAGAAGCGCTTTCTTTAATGTGTTTAGCTAGACGGTGACTTATGATTAACATTAAGATACGTAAAATTGCTCGTATTTCTTCGGGCTCTTCTTGCTTGAATCGATATAGCCTTCTAAGTCTTAAAGGCTATTTTGTTTTTCCTGGGCACCTGAGAGATAATTATTTTTGGTATTTTTGTGTATTGAAATAAAAGAACAAAAATCAAAATAAGACTCGTGAGTATAGGACAAATGGTTATCAATATTAAAGGAAATTTTTGGAGATAAAAAGGGAAAGAACTTTTCAGCCTCGAACTCTATCACCTGAATTTCCTCCGTGGAAGTGATTGTATTACCATTGTCTACCTCACAAACCTGTTTCTGGTGTGTTTCAGTCTCCTCCAATCCATCCTCACTATCATACGAATAAGTTCTCTTAGGTCAATGGTAAGAATTAGAAACTGTTCCTGTAAGGCCTTAAGGGAATTTACCAGTTGATTGAGATAATGAGTTCTTTCATGTACTATTTCCCACAACTCTACCACTTTAACCTCTAATCTATCCAACCTTTCTAATTCATCATCAATCAAATTTTAAATTTTCAACTCTAACGTATATTTCATTAATACGTCCACAAGAAAGGAGTTTTCTACAGGTTGGTCAGGGTACGAGACATTTTGGTTCCAAGTGCCTATATGATTACCATCAAAAGAATTTTCATCAATCATAGATTCAGAATGGTAAGGATTAGACAAATGGTATCCATAAAAATCATGATGCACATACCTAGGGTCCTGAGAACGACACTACATTGGTGGAGAATCAAAATCATGAAAAGTCATACTTTAAAACTCATCAATTCAACTCAAGACTTTTACACATAAATCAACACAACAAAAACAGGAGACAAAAACTCGAAAAACACACAAAACTAAAATAAGGAACAAACAACAAATGCACAAAGAAAAATTAAGGAAAGAGAACACAAACAAACTTTAGTATAAAATCTCAAATTTTCTCCTAATATTAATTAATCTAAATAATCGTCATTCTCCGGCAACGACACCAAAAACTTGTTGCGTAAATTTAATAATGCAATACCGCAAATGTATGGGTCAAGTTTTAGTATAGTGATTTGAGAGTTCCAAGTATCGTCCTCGGGAATGGATTTCTAGATTAATTAATTACCAAGATACTAATTCTCAAATTTTAGCTAAAGTAACATAACATGGATAGATGGTGAAAACAAAGACAAAAGATAACAAACAAGTGAAGACACGAATGTGATAGATTTGGAAGGAATTGACTTCACAAGTTAATAACTTATTTGACACATGCAATGAACTAATGTGATGAATTTATAAACAAGTAAGATACTAAAGAAAATCTCTCAATTCTTAGTGAGCCTCGCACACACAATAAATTATATAGTCTCCATATGAATCTAAAAGCATGCACGTCATTAAGTAACTTTTTTATGTATTTTCCTTAGACATCTAGGTCATTCTCATGCCAGACTTCTAAGAGTTTTGACAACTTTGCTCTAATCTAAGCTTTTTCTATCGAGTCCACTTAAACCAACAAGATTAAAGAATTCAAGAACGAATTGTCAAAAATAAACAACAAAATATAATTCAATGCATAAACAAATAAGTCTTAAACATGTGACTCAAATCCTAACTACAACGTTTAGTCACTCTAAATCACAATAAAACCAAACTAAAAGTGTAGAAAATGTCTTAAAACGGTGTTACAATCTGAAAGAAAAAAGAAAATAAACTTATGTGTCGATGTCGGTCCCTCGTCCCCGAGCTCCCGTCACGATCTCGAACCTCCACGAATGCTTTCGCTCCCAAGGAATGTTCACTTTTCTCTTCTTACAGAGTGTATTTCGAAATTAGGGTGTAAAGACAATCAAATTCGGCTCCTTTTTTAAGAAGAAATCATGTTCTATTTATAAGTATTTTCGGCACAGCGTTGTAATGTTGTGCCCTAGGCGGGTATCAAATATGGGAAGTGTCGGCAGTGTTGCAACGCTACTACCTTAACGCTTGCGTCCTTATCGATCTGGCGTTGCAACGCTAGCAAGCAGCATTGCAACGCCCTCGCCACGGCTTTTCACGTTAATCTTCCTATCGAGATAGCGTTGCGATGCTGCAAAGCAGCGTTGCAACGCTATCGGCATGATCCTTCAACGCACAAAATCAGCAAGCTGGGCTTTGCAACGCCATCACCTTGGGTCCTCTAGCTTCGATTGGTCCTTCTACTTCCACTTGATGTTATTTTAAGCTCCAAAAAGCCTCGATTCGGTCCCGAGTGATCTATAATGTCTCCAAGTGTCCAGTTTAAGTTCTTAACCTTAAATTCAATGATTAACACACATAAAAGCCCTGAAATTATCTTAAAGCTAGCAATAATTAAGCCTAAGGATAACACATTTTGTGTGCTATCAAAGCTCAACAAGTAACTTTAGATGATTGGCTAAAGTTACCCACATTAAATTCACCAAAAGCAAACTCCATTTAAAAGTTAGTTGAATTGATTTTGCTTTTGAGTTTTATGTCTTTCCTCTAGGGCATTCACATCTTGAATCCTTAAGAAAACTTAGCTCCTTCTAGGAAAATTGAAAAACAAAGTTTTAAAGTAATGAAAACACATAATTGAATTTAAAAGGTAAAATAAAATTCCAAAATATAATAATGAAAACAAATTAAACCAAACTTTAAACTATAAGAACTTGAGTAAAAAGAAAAGAATAAAATAAATTAGAAATATTATTGAATTACACAAACACAATGTCGAGATTTAATGAACTTTAACAACTTGTTCGAAGTATAAAAAAAACAACTAAAAGATTAAAACTACTACATGAACTAAATGCCTAAAATTGAACCAAATAACTTAGACAAATGCAAAAAATAAATTCTAAAACAAAAAACAAATAAAAGTTTGTTTTACTTCTCTTTCAATTGATTTAATCCCTCTTTTCTCAAAAAGAATCGAGTCTTTACTTCCTTCAACTTTCATTGAGGAAGGATTGAATTTTTTGAAGTTCAATCGGCTGGAAAAAAAAAAAAACAACTCCTAATCTTGAAAACAGCAGAAAATACAGTTGATATACAACAAAAAATCGTGAAAACAACAACACTTGGGATTGAAAACGGCTGAAAAACGATGCTCCTTCTTGTAGATTCTCCACCCCTATTTCTAGAGAATGTGGGTTAGGGTTTCATTCTTAAAAGATGCATAATTACATCAATCACAGCTAAAATCTTGGAGACAAGATCCCACACAATTCCAATATTTTTGGTAGATTTGTAGTTTTTCTTTAAAAGTTCAAATATGTTGCAATTCTTGATTTTCTGCATAAAAACATCAAGTAAGTGTGTTTTTCATTTTCTTTTACTTCATTTATCCACTTACTTAATTTAAAAGGCTTTCAATAACAATTCAATTTAACCCAACATTTTGCTAGCCTTTTTATTAAATAACAAGAATAAAATAACAAGAATAACTAAGTATAATGGCTAAATAATTCTCATAATGAGAATTATCAGGCGCATCCGCTCGCATGTTCCACATGAATGATTTAGGATCACATCATTTATAGTTTACAAAGTGGGTCGCGTCCATAGTGCCCGCAGGATAAGATACCCAACCTTATCCATATACTATAGATCGTTCTGGCCATTTACTCAAACTTGATCCACTTTTATATCACACATAAAGTTCAAGTATACATCCTATAGCCAAGGTTTCTTAGTTTATTGGATTTGGATTATGGAATACACAATTCATTTTATTCAATAGCACCTTTACTAAATAAATCTCAATAACAAATTTATTGAAAAAAATAGAATGTACATTCAGTTACAAACCACGAGTTTAAGACATAAAACCCAACACTTGAGTCATCTCGTTGGATGAAGGACCGCGTCCAACCACCCCATTTCTATTGGGGTGTATGCCCTAAACTCGTGTCGTTTGTAACATTTGATGAATATAAATAAAAGTTATTTTTCCATCAAACCTTGTATCTCGCATTTTAAACTTAATCCAATAAACTAAGCTTCAGGATCACATATATTTATGAGAGCTTGAACGGTGTGTAGTGGACACACAGGTAGGATCACGTTCGAGTAAATGACCCGAATGGTCTAAAGTATATGGATAAGGTTGGAAAACTCATCTTGGTAACACTGTGGATTCGACCGACTTTGTATTTGATACAAACGAGGCGATCCAGCTTGTTCATGTAGCTGACATGCCAGTGGGGGCATCCTGTGCAATGAGATTGTACAAGATCGGACTGTGATGTAACTTCGTTGGACTAATAAATTCGTGGATGACCATTAGTGACTCGACCTTAATCCTGAGCGGGTTACGAACTCTTGTCTGCAAGGGGTTGTTCTTAGACTAGTACGGGTGAGAGTGTGTCAAAGTCGCCACTCAATAAGCCTATCTTCTCAAGGGAAGAACCACGTGGGTAGCTGGGAACTTAACTCCGCGAGATGGAATTCACTCGTTCGCACGCTAGAGAAACTAGAGACGTTGTTCCCTTAAGGGTTGATTCCAGGACTTGAACAACGGGGCCCCACCCTCTCACTTGCCCGAGAGGGAGGTTGTTTATGGTCCTTAAGGAGTAGTGGTACTTAAGGAGCAGCTTTTCATTAGAGGAGCAACTTTTCATTAGAGGAGCAGTGGCACTTAAGAAGGAAGAGGTAAGCATAGGGGTAAAATGGTAATTTGACCCGGCTATGGCTACGAACGACCTGTGAATGGTTGACTCATGGGTATTGGTTATATCGATGGATACAACTTGTCCCATAGTGAGGAGAGTGCAGCTACAGATCTATGCTCGTAGTTAATGAATGTTGATTAATGGAATCAAAGAGTTTGGTCAGTGAATCTCGGATCATTAGAGCTCATGATATGTAGGTCCATTAGGTCCCTTGGTTGGCTCAATTATGGATTTATTGAGGGTATAAAGTTTGAAGTAAATTTGAAGTGTTCAAATTCACATAAAGGTTATTTATGTCAATTATATGAGATGTAATTGATATAATATATAGTTTGATGTGAATGAGATTCATATTAAACTATACTATTGTCTAATTATGGAATTAAGGCATAGTTAGAGAATGAATTTGAGAGATGTGAAAAATTTAATGTGATTCAATTTTAATCTCACACTATGCAAATGTGATTTGCATAATAAGGTATGTGATACCTTATACTATATAATTATGCAAATATGATTTACATATTATAAAGTTTGTGGTTAAATAGAATATGGATGGAGAATTTCTCTCCACCCCATCCTATTATAAAAAATATGTTTGGAGAAGCATTCCATAAGTCATTCTCTCATTTTTTGGAATTCAATTTCCCAAAACTCTCTCAAATTCTCTTTATTCTCTCCAAACCCAAATCCAAAAGGGAACCCACCTTCCTCCCTCATCCAAAGGAGAACAACCGAGAAGCCCTTGTGGAGGTGTTCAATTCCTTGTTCTGTTCGTGGATTCGAGATCGTGGGATCGAGAGATCGTTGAGATCGTGATAGATCGCGGGAGGAGAAAAACGAGAAGAAAGAGCTCTTCAAACGTATTTGTCACTGTTTTTTCTTTTCTCCCCATGCTTAATCTAGTTTACATGAGATATATGCAATTTTAAGTAGATTTTAAGTAACACAATGGAACACCGTGATTCACATCGCTTCCGCTGCAGGATTCAATCTCATCAAGTTCGCCAACTAGAGGTTTGGGACGAACTAGGAGATCTCAATGGTCATGGGTATACGTTTAGCAAGAAAGACTACCTAGCCAACTAAGGTTTCCTACCGAGATCGTTCAACCTGTGTCACTCCGAAAGGCCTAACTACGATTCAAATCCTTTTCCGGCCACACTTGTCACATTCCTTAACCATTCAACCTTGAAATAGATCAAGCATGAGCAATGCACAACAGTTTAGGTAGTTAAATTTAAAAAAGAATTAGTCACTAACAGGGTCCCAAAGTAGGGTCGACATGACCATTCATTCACACAAGATGGAAATCATTAACAACACTTATGAACCATACATGCAACAAGCTAAGCACAAGGACAACAATAGTTAGGCAGTTTTGTGAACCAATCTAGCTTATCACAACCACGCAACATTTATCAAGTATGTACAGCAAGCTCCCTCACTTGTGAGTTTGCTTGTCGAACCAAATGGCTACTTACTTTACTTGAGAACAGGAGTCGATTATTCCTTCCTTAGTTTAGCGCCCAACTCACCTAGAGCAAGACAACAAAATAACTGATTGTTAGCGATGATTGAACTAGCTTTAACAACAAAAATAGTCATGCGAAAAACCGACTAACTTAAATGCATACCAAAACTTATGGGAATGCACCCAAAGGTCACAAATGACCCAAACTCACGGTAACTACATGGTCCCAACATACATGGTACACAACAAAACAGGGTCGCGAAAACTTACCCATAACTATGTTAGTCAATCACGGAAAACTGAGCTTCCAATCACTTGCCCTTGCCAAAACTCTTTGAATTGA

mRNA sequence

ATGCTTGGATTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTGTTCGGGCCAAGGTTCTACCCGAGGCTATATGGTACCGTGTGCACACAGGTCATTTTCTTTTGTCGACGTTGAGTGTACTCCATGACAACAATGCTGTGGTGATCGAGCTCCCGGTGCCTGATAACCTGCCATATATAGTATGCTTATCAGGTAAAGCAGGGTCAACAGGTATCGTTAGGGAGGTGAACGATGTCTGTTGGCTTCACGCCGTCTGTCGGACTAAGTTAGCTGGTAGCTTGGGAGGGGGGTTGATTCCAGGACTTGAACAACGGGGCCCCACCCTCTCACTTGCCCGAGAGGGAGGTTGTTTATGGTCCTTAAGGAGTAAGGAGCAACTTTTCATTAGAGGAGCAGTGGCACTTAAGAAGGAAGAGTCATGCGAAAAACCGACTAACTTAAATGCATACCAAAACTTATGGGAATGCACCCAAAGGTCACAAATGACCCAAACTCACGGTAACTACATGGTCCCAACATACATGGTACACAACAAAACAGGGTCGCGAAAACTTACCCATAACTATGTTAGTCAATCACGGAAAACTGAGCTTCCAATCACTTGCCCTTGCCAAAACTCTTTGAATTGA

Coding sequence (CDS)

ATGCTTGGATTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTGTTCGGGCCAAGGTTCTACCCGAGGCTATATGGTACCGTGTGCACACAGGTCATTTTCTTTTGTCGACGTTGAGTGTACTCCATGACAACAATGCTGTGGTGATCGAGCTCCCGGTGCCTGATAACCTGCCATATATAGTATGCTTATCAGGTAAAGCAGGGTCAACAGGTATCGTTAGGGAGGTGAACGATGTCTGTTGGCTTCACGCCGTCTGTCGGACTAAGTTAGCTGGTAGCTTGGGAGGGGGGTTGATTCCAGGACTTGAACAACGGGGCCCCACCCTCTCACTTGCCCGAGAGGGAGGTTGTTTATGGTCCTTAAGGAGTAAGGAGCAACTTTTCATTAGAGGAGCAGTGGCACTTAAGAAGGAAGAGTCATGCGAAAAACCGACTAACTTAAATGCATACCAAAACTTATGGGAATGCACCCAAAGGTCACAAATGACCCAAACTCACGGTAACTACATGGTCCCAACATACATGGTACACAACAAAACAGGGTCGCGAAAACTTACCCATAACTATGTTAGTCAATCACGGAAAACTGAGCTTCCAATCACTTGCCCTTGCCAAAACTCTTTGAATTGA

Protein sequence

MLGFGLFDRPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVVIELPVPDNLPYIVCLSGKAGSTGIVREVNDVCWLHAVCRTKLAGSLGGGLIPGLEQRGPTLSLAREGGCLWSLRSKEQLFIRGAVALKKEESCEKPTNLNAYQNLWECTQRSQMTQTHGNYMVPTYMVHNKTGSRKLTHNYVSQSRKTELPITCPCQNSLN
Homology
BLAST of Tan0004253 vs. NCBI nr
Match: TYK11725.1 (uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 9.2e-14
Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 0

Query: 10  PRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYI------ 69
           PRGNR S++   L + +        FLLSTLSVL DN+AVV IELPVPD LP +      
Sbjct: 62  PRGNRPSLQTGELDKTV-------IFLLSTLSVLCDNDAVVEIELPVPDTLPTLFYKPSD 121

Query: 70  ------VCLSGKAGSTGIVREVNDVCWLHAVCRTKLAGSLGGGLIP 103
                 VC     GS GIVR  +DVCWLHAVCR K+AG  GGG++P
Sbjct: 122 VRAASYVCWE---GSAGIVRG-DDVCWLHAVCRAKIAGGPGGGVMP 156

BLAST of Tan0004253 vs. NCBI nr
Match: KAA0060199.1 (uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ95571.1 uncharacterized protein E5676_scaffold767G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 7.8e-13
Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = 0

Query: 9   RPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIV-CLS 68
           RPRGNR S++   L + +        F LSTLSVL DN+AVV IELPVPD LP       
Sbjct: 54  RPRGNRPSLQTGKLDKTV-------IFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESFE 113

Query: 69  GKAGSTGIVREVNDVCWLHAVCRTKLAGSLGGG----LIPGLEQRGPTLSL 114
             + STGIVR  +DVCWLHAV R K AG  GGG    +  G  Q+G T ++
Sbjct: 114 SNSRSTGIVRG-DDVCWLHAVFRAKTAGGPGGGVTFNIAKGSAQQGDTSAM 156

BLAST of Tan0004253 vs. NCBI nr
Match: KAA0037515.1 (uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK01990.1 uncharacterized protein E5676_scaffold808G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-10
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0

Query: 8   DRPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIVCLS 67
           + PRGNR S++   L + +        FLL TL+VL DN+A+V IELPV D LP     S
Sbjct: 98  EMPRGNRLSLQTGELDKTV-------IFLLLTLTVLCDNDAIVEIELPVSDTLPMSAESS 157

Query: 68  G-KAGSTGIVREVNDVCWLHAVCRTKLAGSLGGGL 101
           G  + S GIVRE +DVCWLH V R K AG  GGG+
Sbjct: 158 GSNSRSAGIVRE-DDVCWLHVVFRVKTAGGPGGGV 184

BLAST of Tan0004253 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-10
Identity = 54/127 (42.52%), Postives = 65/127 (51.18%), Query Frame = 0

Query: 8   DRPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLP------ 67
           + PRGNRSS++   L + +        FLLSTLSVL+DNNAVV IELPVPD LP      
Sbjct: 93  EMPRGNRSSLQTGELDKTV-------IFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESF 152

Query: 68  ---------------YIVCLSGK------------AGSTGIVREVNDVCWLHAVCRTKLA 101
                          ++  L  K             GS GIVR  +DVCWLH V R K+A
Sbjct: 153 GSNSSTWLELYFEFVHVEMLFYKPSDVRAASYVCWEGSAGIVRG-DDVCWLHTVFRAKIA 211

BLAST of Tan0004253 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-09
Identity = 48/111 (43.24%), Postives = 58/111 (52.25%), Query Frame = 0

Query: 10  PRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIVCLSGK 69
           PRGNR S++   L + +        F LSTLSVL DN+ VV IELP+PD LP     S  
Sbjct: 123 PRGNRPSLQTGELDKTV-------IFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSES 182

Query: 70  -----------------AGSTGIVREVNDVCWLHAVCRTKLAGSLGGGLIP 103
                             GS GI+R  +DVCWLHAV R K  G  GGG++P
Sbjct: 183 NSSTLLELYFESVHVEMFGSVGIIRG-DDVCWLHAVFRAKTTGGPGGGVMP 225

BLAST of Tan0004253 vs. ExPASy TrEMBL
Match: A0A5D3CJL4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00370 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-14
Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 0

Query: 10  PRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYI------ 69
           PRGNR S++   L + +        FLLSTLSVL DN+AVV IELPVPD LP +      
Sbjct: 62  PRGNRPSLQTGELDKTV-------IFLLSTLSVLCDNDAVVEIELPVPDTLPTLFYKPSD 121

Query: 70  ------VCLSGKAGSTGIVREVNDVCWLHAVCRTKLAGSLGGGLIP 103
                 VC     GS GIVR  +DVCWLHAVCR K+AG  GGG++P
Sbjct: 122 VRAASYVCWE---GSAGIVRG-DDVCWLHAVCRAKIAGGPGGGVMP 156

BLAST of Tan0004253 vs. ExPASy TrEMBL
Match: A0A5D3BAD1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00770 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.8e-13
Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = 0

Query: 9   RPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIV-CLS 68
           RPRGNR S++   L + +        F LSTLSVL DN+AVV IELPVPD LP       
Sbjct: 54  RPRGNRPSLQTGKLDKTV-------IFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESFE 113

Query: 69  GKAGSTGIVREVNDVCWLHAVCRTKLAGSLGGG----LIPGLEQRGPTLSL 114
             + STGIVR  +DVCWLHAV R K AG  GGG    +  G  Q+G T ++
Sbjct: 114 SNSRSTGIVRG-DDVCWLHAVFRAKTAGGPGGGVTFNIAKGSAQQGDTSAM 156

BLAST of Tan0004253 vs. ExPASy TrEMBL
Match: A0A5D3BSA6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001020 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.9e-11
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0

Query: 8   DRPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIVCLS 67
           + PRGNR S++   L + +        FLL TL+VL DN+A+V IELPV D LP     S
Sbjct: 98  EMPRGNRLSLQTGELDKTV-------IFLLLTLTVLCDNDAIVEIELPVSDTLPMSAESS 157

Query: 68  G-KAGSTGIVREVNDVCWLHAVCRTKLAGSLGGGL 101
           G  + S GIVRE +DVCWLH V R K AG  GGG+
Sbjct: 158 GSNSRSAGIVRE-DDVCWLHVVFRVKTAGGPGGGV 184

BLAST of Tan0004253 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-10
Identity = 54/127 (42.52%), Postives = 65/127 (51.18%), Query Frame = 0

Query: 8   DRPRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLP------ 67
           + PRGNRSS++   L + +        FLLSTLSVL+DNNAVV IELPVPD LP      
Sbjct: 93  EMPRGNRSSLQTGELDKTV-------IFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESF 152

Query: 68  ---------------YIVCLSGK------------AGSTGIVREVNDVCWLHAVCRTKLA 101
                          ++  L  K             GS GIVR  +DVCWLH V R K+A
Sbjct: 153 GSNSSTWLELYFEFVHVEMLFYKPSDVRAASYVCWEGSAGIVRG-DDVCWLHTVFRAKIA 211

BLAST of Tan0004253 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09
Identity = 48/111 (43.24%), Postives = 58/111 (52.25%), Query Frame = 0

Query: 10  PRGNRSSVRAKVLPEAIWYRVHTGHFLLSTLSVLHDNNAVV-IELPVPDNLPYIVCLSGK 69
           PRGNR S++   L + +        F LSTLSVL DN+ VV IELP+PD LP     S  
Sbjct: 123 PRGNRPSLQTGELDKTV-------IFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSES 182

Query: 70  -----------------AGSTGIVREVNDVCWLHAVCRTKLAGSLGGGLIP 103
                             GS GI+R  +DVCWLHAV R K  G  GGG++P
Sbjct: 183 NSSTLLELYFESVHVEMFGSVGIIRG-DDVCWLHAVFRAKTTGGPGGGVMP 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK11725.19.2e-1451.89uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa][more]
KAA0060199.17.8e-1349.55uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0037515.11.6e-1050.53uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK... [more]
KAA0067117.12.8e-1042.52hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747... [more]
KAA0042035.14.0e-0943.24DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CJL44.5e-1451.89Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3BAD13.8e-1349.55Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3BSA67.9e-1150.53Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7VIY91.3e-1042.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKT01.9e-0943.24Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004253.1Tan0004253.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0003824 catalytic activity