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Tan0004250 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCTGGGTTTGACTTGACTCTGATTGGAGCTCTGTTGCAGCTCTCTCTTTCTTCTTCCTCTTTGGCTTTCTCTTGCTGTATGATTCTCTGCTCTTTCAAGCAGAGCTTCAATCTCCTCTTCTCGTCTGTTTCGATGCCTTTCACTCCCAACAGGTTTGTGTTTCTGCCTTCTTTTCTTTTTCCTCTTTACATCTCTTTTTTCTTCTGTCTTACAATCTGATTTTTGTTTTTTTTTTCTTCTATTGCAGGACTTGTTCTGGATTCAACTGCTTTGGGGCTTTTCATACAAAACGTTTCTCATTTCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACCTAA ATGTCGGCTGGGTTTGACTTGACTCTGATTGGAGCTCTGTTGCAGCTCTCTCTTTCTTCTTCCTCTTTGGCTTTCTCTTGCTGTATGATTCTCTGCTCTTTCAAGCAGAGCTTCAATCTCCTCTTCTCGTCTGTTTCGATGCCTTTCACTCCCAACAGGACTTGTTCTGGATTCAACTGCTTTGGGGCTTTTCATACAAAACGTTTCTCATTTCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACCTAA ATGTCGGCTGGGTTTGACTTGACTCTGATTGGAGCTCTGTTGCAGCTCTCTCTTTCTTCTTCCTCTTTGGCTTTCTCTTGCTGTATGATTCTCTGCTCTTTCAAGCAGAGCTTCAATCTCCTCTTCTCGTCTGTTTCGATGCCTTTCACTCCCAACAGGACTTGTTCTGGATTCAACTGCTTTGGGGCTTTTCATACAAAACGTTTCTCATTTCTTCTTTTGCTCTTCAGAAGAGGGGGTTTCACCTAA MSAGFDLTLIGALLQLSLSSSSLAFSCCMILCSFKQSFNLLFSSVSMPFTPNRTCSGFNCFGAFHTKRFSFLLLLFRRGGFT Homology
BLAST of Tan0004250 vs. NCBI nr
Match: KAG6579195.1 (hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016707.1 hypothetical protein SDJN02_21817 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117.1 bits (292), Expect = 7.2e-23 Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0004250 vs. NCBI nr
Match: KGN45959.1 (hypothetical protein Csa_005610 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18 Identity = 59/82 (71.95%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Tan0004250 vs. NCBI nr
Match: KAG2664121.1 (hypothetical protein I3760_16G064500 [Carya illinoinensis] >KAG6624987.1 hypothetical protein CIPAW_16G064600 [Carya illinoinensis]) HSP 1 Score: 90.9 bits (224), Expect = 5.5e-15 Identity = 53/88 (60.23%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Tan0004250 vs. NCBI nr
Match: KAG6672509.1 (hypothetical protein I3842_16G060900 [Carya illinoinensis] >KAG7941769.1 hypothetical protein I3843_16G063000 [Carya illinoinensis]) HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14 Identity = 52/88 (59.09%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Tan0004250 vs. NCBI nr
Match: CAB4295610.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 74.7 bits (182), Expect = 4.1e-10 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0004250 vs. ExPASy TrEMBL
Match: A0A0A0KAV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039145 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.2e-19 Identity = 59/82 (71.95%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Tan0004250 vs. ExPASy TrEMBL
Match: A0A6J5TMY7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS7049 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0004250 vs. ExPASy TrEMBL
Match: A0A6J5W1Y9 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS7038 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10 Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0004250 vs. ExPASy TrEMBL
Match: A0A2H5P3Q3 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_101140 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10 Identity = 47/88 (53.41%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0004250 vs. ExPASy TrEMBL
Match: A0A5D2MYL6 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A12G192200v1 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.6e-10 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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