Tan0004223 (gene) Snake gourd v1

Overview
NameTan0004223
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
LocationLG09: 18703351 .. 18718148 (-)
RNA-Seq ExpressionTan0004223
SyntenyTan0004223
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAAAGCTAATTGAATTTCCTACAACTTTTGTGAAACAATCGTGAGTAGAAAACGACTGGAATATGTTTTAAATTTCTGGTTACGTTTGTTGTGCAGTAGGAAATTGAATCTGGAAACAACAGTAGGTATTTTCAAACAAATCTGTTGGGAATCTCAATTTCCTTTCTTCATATGATTTTTAGAGGGTTCAAAAAGGAAGAGTTTGGTATAGAGTACATCCTTCGTGGATAAGTAATGAAGAAGTTATAACTTTTTGAATACATGGTATAAAATTTGTGAAATGCTGAAAAATTGGATGGTGTGGTTTTTATAATTTTAAGGCTAAGAATCACGAGCTCGAGGTTCTAATACATTGATTTCGTTTGTTTGATAGGACAAGAGGAGATAGGTCGAGTGTACAGACCAATGTTATAGTTTAACACTGTCAGTGACAAAACGAACTTCGAAATTTAACTATATGCTTGAAACATGCTTTAAGAAATGCAAGTTTTGCTAGAATGAAAGATTTCAATGCTTTATGTTTTCCTTTTGAACACATGTTTATGAGTATAAATATTTTCCTAGATAAGGTTTCAAGTATTCATTGTGACCCTAAATGTCTTGATGAAATTTATACATCAGCATATGTCTATTGATTGCCGAAATTTATGGATATGTTATGATTTCGAGCAAGTATGTACTAGCAAGTTTGATTTAAAGATTTTTGAGTTTTATGAACAAGCTGAGTAAGCTTGAGATTTGTGAATGAAAAGATAAGCAGGCGTGTTCAAATATTTTTATGATGTTTTCTGAGACCCGATTGAGTAAATGACTGAGAAATTGAGCCCGAGGCTTTATGGTACCTTGTTCACACAGGTCATATTCTGTTGTCGACGTTGAGTGTACTCCGTGACAACAATGTTGTCGTAAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGTCTTGAGGCGCACCCCACTACATCGTGAGAGTAAACGTTGGTTCTCATCGGGCGTGCCCTACTCAACGTGGATTGTGACATGTTTTAAAATTGTTTATATCATTTATATGCCTTATGAGATTTTAACGACATACTTGTTGGTTTTTCTGAAAATCTATTATGATTTCACGTTTACTTTTAATGCTTGAATACAAATGCATATGCTCATAGTTTTCAGGTGACATGTTACAAGTTATAGATTTTAAACACAGTCACTCACTGAGCTTCATAGCTCATTCTTTCAACGTTTTCAAACTTCTCAGGTAGACATCAACCTCTTGGTACTTGACATCCTTTCATAGTCTACTGAAAGCTCCACGAGTTGATATTTTGTACATGGTTTGGTTGTATAGCAAGTCCTTATGTATTGTAGTTAGTTTTGAGGTGACTATGTAGTTATAGTCGTATGTGCTTTAGAGGTTGTGGTTGTTTAATTAATGGTTTGGCCCGTTTGTGGTTCTTTTGCTCTTGCTCGTTTTAGTTTTCAAGAGTGATTTAAGAAGTGTTTCTCCTTATGTATGTTTAATAGTACTTGTAAGCCCTAAACTGTATTTTCTTTTATCATTTTACACTCATTCATGATGTTTTGAAATAAGCAAAATCGTATAGGTTGCACTAAATGATGTCGTGATCGAATTTCGGAATCTATTGAATTTGGAGCTACAATGTTTCTAAACATCATAAGGGAATAGGTAAACCATTGAATTAAGCATATTAAAAGTTGCATTGAAGTAAGTTCAAATCATTAGCAAATTGGAGAAGTTTTAGGTGCATCATGTATTGAATGGAAGATCATATGTCTCACATACTTAGGATAAGTTGGCTAAATGCTTAGGGTTTCTCTACACACTTATTTTGGTGTTTTAAAAAGGTGATTATGATGTAAATATTGAAGGAGGAGCTGGCCAAGGGAGGTGAAGCCTCGGAGTTAAACAAGACAAGTAGGTGCTGTCAAATTCGCAGAAAAACAGCAAGCAACTGGAAATTGGGTAACCTTCAATCGACCATATCTCTCTGTCTAGTGAACCAAAATCGATGATTTTTGTGTTAAAATCTCAGAAATTGAGTGTAGAATACGAAACTTATCGACCTTTCAGAAAATACCAAGAGGACGAAGTAGAAAAGTGCAGAATAGTGAAGGGTGTTCAGGATTCTCAAGTAGCAGAACAGTATGAGGAGATCAGTTTGTTTTGAGCTCTTGAGGAGGAATTAGAAGCTGAAATTTTGAGGTAAGTAAGCTAAGATGTTGTCCTTCAGGTTTATCAAAAAATATTTGGTGGTTGTGTTGATAAGTTTTGAGGAACCCAAGCTGAATGTTGAACCTGTAATTTTAGGTGAAAGGGAAAAATTTATAGCAAGAGATTGAAGGAGATTCTCTTCCATTTCTATATACCTTACAACCAATTGTGTGTATGGTTATTCTGAATTGAGTTATGGGATCAATTAGACCTTTTTCTAAGGTGCATAAGGAAAGGAATTGATGTTACTGTTTTGAGGAAGACAGAAGACAGAATTTGCTGTCAAATCTGGGAAGTCTCTGATGTGTTGGTTGTTTTGATTTGAATACTTGGAGTTAGAAGCTCTAATTGGTATGGTTCAAAAGCTTATTGAATTTCCTACAACTGTTGTGAAGATATCGTGAGTAGAAAATGTCTAGACGATGTTCTAAATATCAGGTTAAATTTGTTGTGCAGCAGGAAATCCGAATCTGGAAATAGCAGAAGTCTGTTTTGAGGAATGTAGCTTTCGAGGTATTTCTCAACAAATCCGTTTGGAATTTTAATTTCATGTCTTCATATGCTTTTTAGAAGGTTCAAAAAGGAAGAGTTTGGTATACATTACATTATTTTTGGATAAGTAATGAAGAAGTTATGGCTGTCTTAAAACAGGACAGAAAAACCAAAAATGCTGGAAGTTTTAAAGTCAAAAATCATGAGCTCGAGGTTCTAATGAATGAGTTGGTTTTTTTGACAGACCAAGAGCAAATATGTCAAGTTTACAAGCCAAGGTTCTAATTCTAATACTGTGAGTGACTCTATCTTAGAACTATGCTTGACCTATGTTTGTCTTCATGAACATAAGTGTTGATATTTACATCTTGTTTGAACTAGTTATGAATGGCTTCATAGAGTTTTCTAACATAAAGTTCATGATGGAACCTAAGCATGCTTGAAGTTAGTTGTAACTATAAATCCAAGTATGGAAACTAACTTGTGAAAGTATGCTTTCCTTTAGAGAATGTTTGTGTAAATCCACTTGGGAACATGTTTAGATGATAATGTGAAAATGTCAAGAAATTGTTGAATGTGTTATAAAGACGTGATTTTCGTGGTATACAAATTATGCCCTTGTTTGGGGTTAACCCCTAATACTGAAGGACATTCGAGAAGGTACTTAGGGGGGAAATTGTCACACCCCCTCCCGAACCACTTGCTAACTCAGCCCGGGAGACAGCATGAAGCCAACAGACATTGTTACCTCTTAACAATACCTGCTTGACACTACTTTACTCGAAAACAAACTATGTTCGTGATATGGAACACCTTAAACTTAACTCAGTGAAATCTGGACATCTATAAGACGTACATGAGGAGAAACTCTTCTTAAGTCTCTCTTGGAAACTAAGCTAGGCTAGAACATCAGAACCACAAACAGTCCAAACCACTAATTAAGCAACCATAACCTCTAAAGCACATACGACTATAACTACATAGTTCTCTTAAAATAATGTACAGACATATGGACTTGCTAAACCACACCAACCACGTATAACATATCAAACATGAGAAGCTTCCAAAGAGATTATAGCGAGTTATCGTGCACCGGAGCTCGATCTCTACCGAAAAGGGAAAAACACTAAAAGAATGAGCTATAAAGCTCAAAGTGAGTGACTTGAGTTTAAAAGAAAACTATTAACTCGTAAATCATATCACCCGACCATCTATGAGCATATGCATCCAGAATCAAGCGTTAAAAGTAATCGTGTAATCATTATAGCTTTTCATGAAAACAAGCAAGACACCGTTAAAATCTCGTAAGGCATGTAAATGATATAAACTCTTTTTAAAACATGTCACAATCTACGTTGTGTAGGGCACGCCAAAGACACCAACGCTTATTCTACGATGTAGTGGGGCCCGCCGGCACTCACATCGTCTTTGTCGTAGTGGGGCCCGCCCAGCACTCACGACAGCGCTGTTGTCACGGAGTACACTCAACGTCGACAACAGAATAAGACCTGTGTGCACACGGTTCTACATAGCCTCGGGCTCAATATCTCAGAAGATCACATGAAAACATTTGAACATGCCAGCTTATCTTTTTCTTTCATAAAACTCAAGCTTACTTAGCTTGTTCATAAAACTAGAAATCTTTAAAACATACTTGCTAGTACATGCTTGCTTGAAATCATCACATTTTCATAAGTTTTGGCAACCATTGGACATATGCTCATGTATAAACTTTATAAAGACTTTTAGGCTCATCATGAACACTTTAAAACATTTCTAAGAAATCATGAATGCTCATAAACAAGTGTTCAAGAAAGCAAATAACATCTAAACCATTTTCATTTTAGCAAAACCTTGCATTTCATAAGCATAATACAAGCCTATAAACCATTTTCAAGGTTCGTTTTGTCACTCACAGTGTTAGAACTAGAGTCTTGACCCGTACACTCGACTTATTTGCTCTTGGCCTGTCAAACAAACCAAATTCAACCATTAGAACCTCGAGCTCATGCTTTTTAACCTTAAACTTACAAGAAAACACACTTTCAAAAATTCCAGCATTTAACAGATTTTATGCCCTGTATTCAGATACTCATAACTTCTTCTTTACTTATCCAAAAATAATGTACTTTATACCAAACTCTTCCTTTTTTAACCCTCTAAAACTCTGATGAAGACATGAAAATGAGATTCCCAATAGATTGGTTCAGAAATACCTCGAAAGCTCCTTTCCCCGGAACCAACTTCTTCTATTCCAGATTCGAATTTCTGCTGCAACCCGAAACTTGACCTGCTATTTACAACATCTTTCAGTCATTTTCTATTCACGATTTCTTCATGAAAGTTGTAGGAAATGCAATAAGCTTTCCAACCATACCTAATAGAGCTTCTGATTCCAATTCTACAGGTCAGTACAACCAAAACATCAGAGACTTCTCGGATTTGACAGTAAATTCTGTGTTCTGACTTCCTCTTCATAAATCAGTAGCTTAGGGTCCGAATTTGCTCGAGCATCCTTCACGAATTGTGTTCCAATATGAGTTAAATTTCATGAAACAAAATTTCAAATCTTACCTCTTCCTTTGGAGCTCGAGATGAACAAAATAGCAGAACATGGTAGAGTGATTACCTTGCTGTCATACTAATTTGCTTGAATTCTCTCCCTCTCTTCTTCAATTTCCAGCTGAAACCCTCTTCTTCTTCTTTCTTTAAGCTTCTCCCATGAAAACCCTTGACTTTACTTCATAAAATGAGGAGAAATCGATGGAGAAGCCTTTTTAAAAAGAAAGAAACAAGGTGGGGTCCCACCATCCACCATCCACCTTTCTTTTCTTTTCTTTTCTTTTCTTTTTCCTTCCTTTATCTTTTCATTTCTTATCTTTTCTTTGCAAAACAAAGCAAACTTAGTATATTAAACATTTGTTTCATTTCCTTTTCTTCTTTTGTCTTAAAAGCAATCCAAACCGAAATGGTTTAAACTTTCCTTTCTTGTTTTCCTTTTGCCTTTCACTTCATTTCTTTCCTTTTTAAAACATGGAAAACCAAGTTTTAAACATTCATTTCTTCTTCCTTTTGTTGTTTGATAATAAGGAGGTTCCAAAGAAAGATCTCGGGTTTACAACTTACCTCCTTTAAGAAATTTCTGTCCTCGAAATTTGGTAGTCCTTAGGTGAAAATCATCGGATACTTCCTCCTCATTTAGTCTTCTAACTCTTAGGTTGTCTCCTCCACTTCGTGATGTCTCCAACGAACCTTCACGAGTGGGATCGTCTTGTTTCTTAAAACTTGTTCTTTTTTACACGAGGATTTGAACTGCATCCTCTCAAGTAACTCATGTCTTTTCACTCAACGGGTTGTGCTTGTAGCACATGTGTCAGATCTGGAATATACTTCTCAACATGAACACATGAAAAACATCATGTATTCAAGATAGTTTTGCTGGCAATTCTAGTCTGTAGGCTGCTGGCCCAACTTGTCCCGTTACTTGATAAGGACTAATATATCTAGGGCTTAGTTTACCTTTCTTACCAAAACGAAGGACACCTCTCCATGGAGATAACTTCAAGAAAACTTGATCTCCAAGAGCTACTCTGACAAACGAATAAGAGATTTAGAATTCGAAAGGAAAGGGAAGCTGAGTCCGAGATATATAGGGCCTTACGAGACTATGCAACGTGTAGGCCCATCAGCGTACAAATTAGCCTTACTGATAGAATTGTCTCGGGTACATAATGTTTTCCTTGTATTAATGTTGAGGAAATACATTTCTGACCCATCACATGTGATGAAAGCAGAACAAATACAACTTAAGGAGAATCTATCCTATGAGGTATAACCTCTACAATTACTTGATCGAAAATAACAAGTACTTAGGAACAAGTCAATACCATTGGCAAAGGTATTGTGGAGAAATCCTGACGTCGAGGAAGAACATGGGAGAGTGAAGACTAAATGAAAGAAAAGTACCCACAACATTTCTCGTGATGAATTTCGAGGGTGAAATTCCTCTTAAAGAGGTAGTAAATAGTAAGCCCTTAACTCTATTTTTATTTTTTATCATTTTGCACTCATACGTGATGTTTTGACATATGCAAAATGATATAAGTTGCAGTAGAGGATGTCGTTGTCGGATTTGAGAATCTATTGAATTGGGGACTATAATATGTTTAAAGCTTCATAAGGAGATAGGTAAGCCATTGAAATAAGCATATTAAATGCTGAATTGAAGTAAGTTAAGATCATTAGCAAATTGGGTAAACTCTAAGTGCATTATGTATTGAATGAAAAGCTTTTATTTCTCACAAACTTAGGTAAAGTTGACTAAATGATTTAGGTTGATTTACTTACTTGTTTTGGTGTTTTAAAAAGGTGATTATGATGTACTTATTAAAGTAGGAGCTGGCAAATGAGGTGAAACCTCGGAGTTAAATTTGGTTCGTAGGTGCTGTCAAATTTTTCGCAAAACAAGCTGCTGGAAAATGGATCAACTTCAAACGACCATATCTCTTAGTTCACTGAACCAAATTTTATGATTTTTGTGTCCGAATCTCATAAATGGAGTGTAGAATACGAATACGGGTCGACATTTTTTAAAATACGAAGAGGAATAAGGAGAAAAGTACATAACGCTAAGGGATGTTCACAGTTCTCTGCAGCGTAATAGTGTGAGGAGATCAATCAACCAAGTGTGTATTGTTATTATGAATTTTAGCAAAAAATATTGGGTGCTTGTTTTGATAAATTTTGGGGAAGCCAAGCTGAAATCTGAACTTGAAATTTGAGGTGTAAGGAAAAAAAACTGCTAGCGAAAGATTGAAGGAGATGTGCTTCCATTTCTATATACCTTGCAACCAAGTGTGTATGGTTATTATGAATTGAGTTATGGGACTAAATTAGATCTGTTTTTAAGGTGCGTAAGGAAAGGAATTAATGTTATTAAGTTCAATTTCAGGGCAAAAGGAGATAGGACTATATTGTTGGTAATTGTGAGTGACTTTATTTTAGAACTATACTTGACCATTGTTTTTCTTCAAAAGCATAAATGTTGATCATGGAATCATGCTTGAATTAATTGTGTATAGTTTCATGGAGTTTTTAATAGAATGTTCTTTATGGAATTTAAGTCTGTTTTTAATTAGTGGGTAGTTATATATTTAAGTATGGAAACTAGTGATGGAAGTATGATTTCCTCTAGAGAATGCATTGTGTAAATTCACTTGGAAACATGTTTAGGAAAGTAATATACAAATGTTGAGAATTTGTTGTATGTGTTTTGAAAACATGATTTCCATGGTAAACGAATTATGCGACTGTATGTTGTTAACCCCCAGTACTTAAGGACATCAAGAAGGTACTTGTGAGGGAGGAATCGTGTTGTCCCGATACTGAAGAACGATGAGAAGTTATTCGGGTATTGAATGGTCTTATCCTAGTACTGAAGGATATATGGAAGGTAATAGGGAAAACAAAAGTGCCCAATGGCATTCCACGTGCACGAGAGAGAGGTATGAACGTTGTTCGTATAAAGATAACTCTACCACCTCTAAGGTTCGAAAGCGGTATCATGCCATGGGTTTTATTGTTATGAGCTTCTACGCTATGGATCTGTTTATTCTTCTTTATAACACTACATTATGAGTTTTTATGTTATACCTAAGTGGTGACTTAAACCTGTAAATTCATAGCATGGCTTGATTACGTTCACAATCAAGTGTTAAGTTATTTTCTTCTTATTGCCTATCCATTATTATGCTTCGCCTTTGAGCTTATAATGTTTTAATAATAGACACTCACTGGGCTTCTCAACTAACATTTTCAATATGTTTACTCTTCCCAATTAGCAGACGAGTTCTCGATGCTTAGCCGTGACGAGACCTGTTTGCCACCATGTCAGTTTAGCTCCTTCTACATACACTTTCTTATGTATATGGTTTGGAGTGAAAACATATTAGTTGGGTTGTAATCAACTTTAATGCATTAAGACTAGCTATATAACATAGTACTGGAAGTGAATTTTTCTTTCTTCTGTTGGGATTTATGCCTTAAACTTGTGAAATTTTGATCAATTAAATAAAGTGTTATTTGTTTTCATAAGATTACAGTGTTGCTTTTACAAATCCAATAAACTAGGCTCCAAGGTTATAACGTTTATCTTCAAATCAGTGTAGTGGACACTATTTGGGTTGAGTTCATAATTATAACATAAATAGTCTATGGTATAAGAATAAGGTTGGAAACCTCATTCTGGTAACACCATGGATGTGGCCCACTTTGTAATTAGTACAAATGAGGTAATCCAACTCATTCATGTTGTTGACATGCTAGTGGGGGCATCCTGTATGAAGAGTTCATACAAGACTGGATCCAAAATTATTAGTCTAACCAAAGTGTAACAATCGCTAATGTGATAAGACTAGTAATTTATAGATGGTCATTAGTGACTCGACCTGAATCTCGAGCAAGTTAAGAACTCCTGCTTATAGGGGTTTGTCCTTAGACTAGTATGGGTGAGAGTGGCCTGTAACTGACTCAATAAGCCTACCTTCTCAAGGACAGAACCTTGTAGGTAGTTGGAAACTTAACTGTGCAAGATGGAATTCACTCATTCCTCTACTGAGGAATTAGATAGGTTCTTCCCTTAAGAACGGACTCCAGGTCTTGAACAACGGGGCCCCACCCTCTATGAGGGTATGAGTCTAAGGTAGGACCTTAGACTTGTTGTTCATTATAGGATCAGTAGTGCTTAAGGAGTAAAGAGGTAATCGCAGGGGTAAAACGGTAATTTGACCCAGTTGTGATTACGAACATCCTGTGAAGGGTCGACTCATGGGTAATGACTATATCAGTGGACACAATATTATCTACAGTCAGGAGAGTGCAGCTACAAGTCTATAGTGGAGTGACTTGTAGTTAATGAATATTGATTAACTGGATCATAGAATTTGATTAGTTAATCTCACATCATTGGAGCTCATGATCTGTAGGTCAATTAGATCCCTCCGTTGGCTAAATATGGTAATATTAAGGGTATAAAGTTAGGAGTGAAATTGAAGTGTTCAATTTCATACATGAGGAGTTATATCAATTATATATGATATAATTGATATCATATATAGTTTTAATGTGAATTAGATTCATATATAAACTATGTACTAAAGAGAGAATAAAGGAGGGGTAGGATGGTCATTTCTATCCCAATCCCCTATATATATGGTTGCATGAGATGCAACTAGGTCAAGAAGTTTTTCATAGAATTACAACCCGTCTCTTGTTGTGATGTTGGAAGAGTTCCAAAACAAACATCTCTCACAAAAACCTCACGTCTCCTAAAGGGAACCCACATTCTTCCCTCACCTAGAGAACAACGGAGAAGATCCGGTGGTCGTGTCTTCATGCGTTGGAGTTCCTGTTGTTGAGATCGTGATCGTGGGAGAGAGGAGCACTCGAAGAAAGGTTCTTTAAAGGTAATTTCTTGTTGTCCATTCTATTATATATGCTTAATCTTGTTATTTGTGTTCTTGAATAAATCGTTGTAAATAAATGAAGAGCGCGCGATTCGCAATCGCTTCTACTGCGGGGACTTCGATTTCCTTCAGCTTCTATGTGTATTTAAGTGTTCAATCTTACTTGTTCAGACGTGTTGTGTTGCGTTGAACTTTAGGTTAAATCTTAGGTTCGTGAGGGAGAGACGGTAAGAGGGCTGGTTTTCTCAGCCTTTGCATCTTTTCCTAGGTGAAGCAAGTAAGTTGGGAGGGGGTGTGACACCTGATTATGAGAGTTATAAGTACCGTCTCTATGCAACGGCACACGCTTGACCCTACTCGGCACTTGTTATACTAGCACGAGCTGGAGCTCAGTGGTTGACGAACAGAGGCGAGGTTTCAAAACTCACAAAAGCTGACCTATCATTCCAAGTGTGGCACACTTTTGTCTAAGCTAGACTCCAAGAAGTTGGCCATATGAGCGACGTGATGATGAACTGAGCTATCCTCCTATACACCCTTATTACTTGGAAGACGATTGACTTGGGCAAAGTCATCAGTCGTTACATCCGACACGTTTGGAGAGGCACGGCCACTGGGCGACTAGGGCATCCCTCTCTCATCACCACCCTATGTCTTCTTGCCAGAGTCACCTTGACCTCTGAGGAGGAGTTGATTGACCCCAATGGGCTGATGGACAAGAATTACATCATTCTGTCTAATGGGATTACCAGGATCTGGTTCGCGTCATGGCTAGACTGGAGATGTGGCCCGATTCTCCACATCACTCTGTCTAATGGGATTACCAGGATCTGGTTCGCGTCATGACTAGACTGGAGGAGCGCTTCGACCAATACGAGACTTAGAGTAGTCATCAGAAGCGTCGGATCATGAGGCACTTGCACTACAATGAGGTCTCCAACCGCCATCTATACGGTTGTCTCATACACATTCATTGCTCAAATCTAGCATTCCCAGGCCCTATAGCTCTTTACGCCTCATCTGATGACGAATCAGAGTTTTTGTACGTGTCCAGGGCAATGCAATTCTTTTCTCTCCCCCATTGCTTCTTTATTCAATTTTTTTTCTCTGTTTGGCGTGATCAGATGACTTTTTAATTATCATATCGTGTACTTTTATCTAACTCCATTCCATACGCTATCATATTCTACTGTTTGTATCTGGGTCATTTGATTCATTCAAGGATGATGAAATGGATTTCTCATTGTAAGACTTTTTATTCTGTCTAGAAGATCGTTGTCACGTCGATAGGCTTGGGAGCTGATGAAAGAGGAAGTTTGCATAACTGAAATTTATACCTTTTTAAAGTTTTTCAACTTTTTTTAAAAAAATAAAAATAAAAAAAATAAAAAGAGGGTACTCTAACATCTTAAGTGTTGCGACCACTACAAATCTTTAAAAGTAAATCACTTAGAATGTGAGCAGTCTTTGACAATCTGTATGGTATCTGTGCTCGTAGTCAACTATTTTCAACACAAAGTGTTAATATGTTGCAGCGAAGGCATATATGACTGAGTGATTCCCTCCAAAAAAAATAATAATATAATATGTGTTAGTGAAAGAAGGTTTGAGTTTTGGGGTGAAAAAAAAAACATCTATAAATATCATCCGAAGGGGGACACACTCATTTGCACCACGAGGCCAAGTATGGATCTCACGGTGTGAACTTAACGGAGATTTGTGGTGGGAAAATTAAATGTATCTCATACATTTTATTACCTCCCATTGAAAACCTTAAATTTGTCAGGATTGCCTAGATAAATCGGCTAATATTTACCTAAGTCTACCAATATAACTCTTATATTGGATTAGCCCACGTCTATAATCACATTATTAATTTAGGTCTATGTGAGTATACTAATTAACTTTTATTTAATGGCACTCATGAGAATATAACCTATGAATCTCTGGACCAAATTCACTCCCAAGTCGGTTCACGTATGCGTCAGCTTAAATACCCCAGCCTGAGACAAAACCCTTCCTTAGATCGAGTTACTAATTAGTTGTAAACCCAATCTCTTTGGAACTTCCTTATTAACAAACAACAAAAAGAAAGAAGAAATGAATGTTTAAAACTTGGTTTTCCATGTTTTAAAAAGAAAAGAAATGAAGTGAAAGACAAAAGGAAAACAAGGAAGGAAAATTTAAACCATTTTAGTTTGGATTGCTTTAAAGACAAAAGAAGAAAAGGAATGTTTAATATATTGAGTTTTGTTTTGTTAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGGGATAAAGGAAAGGAAAAAGAAAAGGAAAAATAAAAGAAAAGGCAAAAGGGAAAAAGACAAAGATTGCCTCCACCGATTGCTTTTCTTTAAGTTATTTTAAAAACCATTTTTAAGACTCATTTTTCACAAAAAAAAGCTGAGGCCTCGTGAGGTGAAGTTCAAGGAAGAAGAAGAACCTGGTTTTGGGATTGAAGTTGCCGAAGAAAGGAGAAGAACTCAAAGTAGCAGCAAGGAAACTATTTCATCCCAGTTCTGATATTTTGATCTTTTTGAGCTCAACAAGAAGAGGTGAGAGTTTAGTTTTTAATACATGAAAGTTAACTCCATTTGGAACAATGTTCGTGACGGAAGCTCGAGCTAATACTAAAGTTAACTTACTGTTTTGTGAAGAGGAAGGCAGAAGACAGAATTTGTTGTCAAATCTGAGAAGTCTCTGATGTTTTGGTTGTTCTGATCTGTATACTTGGAGTTAAAAGCTCTAATTTGTATGGTTCGAAAGCTTATTGAATTGCCTACAACGTTCGTGAAGAAATCGTGAGTAGATAATATCTAGAAGATGTTTTAAATATCAGGTTAAATTTGTTGTGCAATAGGAAATCCGAATCTGGAAACAACAGAAGTCTGTTTTGAGGAAAGTAGCTTTCGAGGTATTTCTGTACAAATCTGTTTGGAATTTCAATTTCATGTCTTCATATGATGTTTAGAGGATTCAAAAAGGCAGAGTTTGGTATAAATGACATTATTTTTAGATAAATAATGAAGAAGTTATGGCTGTCTGAAAATAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTTGTAGTTTTAAGGTTCAAAATCATGAGCTCGAGGTTCTAATGGTTGAGTTTGTTTGTTTGACGGGCCAAGAGCAAATAAGTCAAGTTTACAAGCTAAGGTTCAAATTCTAATACTGTGAGTGACTCTATTATAGAATTATGCTTGACTTATGTTTTTCTTAAAAAACATAATTGTTGAACATAGAATCCAGTTTGAACTAATTATGTATAGCTTCATGGAGTTTCTAACATAAAGTTCATGATGGAACCTAAGCATGCTTTGAATTAGTTGTAACTATAAATCCAAGTATGGAAACTAAATTATGAAAATATGCTTTCCTTTAGAGAATGTTTTGTGTAAATCCACTTGGGAACATGTTTAGATGATAATGTTAAAATGTCAAGAAATTGTTGTATGTGTTATAAAAACATGATTTCCATGGTACACAAATTATGCCCTTGTTTGTGGTTAACACCTAATACTGAAGGACATTCGAAAAGGTACTTAGGGGGGGAATGAATCGTGATATCCCGATACTTAAGGACAATGAGAAGGTATTAGGGTAGTAAATGGTTTTACCTTAATACTGAAGGACAGTGAGAAGGTAATCGGGTAGTAAATGGTTTTACCTTAATACTGAAGGACAATGAGAAGGTGTTCGGGTAGTAAATAGTTTAACCTTATTACTAAAGGACATAGAGAAGATATTAGGGAAAATCAAACGACCAAGGGTATTCCACGTGCACGTGAGAGAGAGAGGTATGAACCTTATTGGTATAATGTAACTCTACCACCTCTATGGTTTGATGTGGTATCGTGTCATGTGTTTTATTGTTATGAGCTTCGATATTATTGATCTATATACCCTCGATATGATAGTACATTTCGAGTTGTGTGCTACGCACAAGTGGTGACGTTAACCTGTTAATTGGAAGCATGATTTGTTTATGTTTACAAATAGATGTTAAGCTATTTTCTACTTATAATCTGCCATTATTATGATTCACCTGTGAGTTTATAATGTTTTAAAGATAGACACTCACTGAGCTTTTTAGCTCATTCTTTCAATGTTTTCAAACCTTTTCAGGTAGAGATCGAGCTCCTAGTACCTGACATCCTGCCATAGTCTGCTGCAAGTTTCATAAGTTGATAGTTTGTACGTGGCTGGTGTTGTATAGCAAGTCGTTATGTAGTTATAGTGGTTTGTGCATAAGAGGTTGTATAAACAGTGGGTTGGCACGTTCTGAGTTGTGATGCTATTGCTCGTTTAAGTTTTCAAATGAGAGACTTAAGAAATGTTTCTCTCTATGTATGTTTAGTAGTTATCAAGTTTCCGTTGTGTTATGTTAAAATTTACCATATACGAGCATAGTATGTTTATCAGGTAGAACAGGGTCATCAGGTATTATTAAGAGGTGAGCAATGTCTGTTGGCTTCATTCCTCTTTCCGGGCTAAGTTAGCCGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

mRNA sequence

ATGGTTGGAAAGCTAATTGAATTTCCTACAACTTTTGTGAAACAATCGACAAGAGGAGATAGGTCGAGTGTACAGACCAATGTTATACCCGAGGCTTTATGGTACCTTGTTCACACAGGTCATATTCTGTTGTCGACGTTGAGTGTACTCCGTGACAACAATGTTGTCGTAAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGTCTTGAGGCGCACCCCACTACATCGTGAGAGTAAACGTTGGTTCTCATCGGGCGTGCCCTACTCAACGTGGATTGTAGAGATCGAGCTCCTAGTACCTGACATCCTGCCATACAATGTCTGTTGGCTTCATTCCTCTTTCCGGGCTAAGTTAGCCGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Coding sequence (CDS)

ATGGTTGGAAAGCTAATTGAATTTCCTACAACTTTTGTGAAACAATCGACAAGAGGAGATAGGTCGAGTGTACAGACCAATGTTATACCCGAGGCTTTATGGTACCTTGTTCACACAGGTCATATTCTGTTGTCGACGTTGAGTGTACTCCGTGACAACAATGTTGTCGTAAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGTCTTGAGGCGCACCCCACTACATCGTGAGAGTAAACGTTGGTTCTCATCGGGCGTGCCCTACTCAACGTGGATTGTAGAGATCGAGCTCCTAGTACCTGACATCCTGCCATACAATGTCTGTTGGCTTCATTCCTCTTTCCGGGCTAAGTTAGCCGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Protein sequence

MVGKLIEFPTTFVKQSTRGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLHRESKRWFSSGVPYSTWIVEIELLVPDILPYNVCWLHSSFRAKLAGGSGGGVTTWYQSS
Homology
[Close]
BLAST of Tan0004223 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-17
Identity = 67/166 (40.36%), Postives = 79/166 (47.59%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+R S+QT  I + + +        LSTLSVL DN+ VVSAG+APLRQRRW  R  P  
Sbjct: 84  RGNRLSLQTEEIDKTVIF-------PLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTT 143

Query: 78  RESKRWFSSGVPYSTWIVEIELLVPDILPY------------------------------ 135
              K        +ST++VEIEL VPDILP                               
Sbjct: 144 SFFKM-------FSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVIL 203

[Close]
BLAST of Tan0004223 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-17
Identity = 67/166 (40.36%), Postives = 79/166 (47.59%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+R S+QT  I + + +        LSTLSVL DN+ VVSAG+APLRQRRW  R  P  
Sbjct: 84  RGNRLSLQTEEIDKTVIF-------PLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTT 143

Query: 78  RESKRWFSSGVPYSTWIVEIELLVPDILPY------------------------------ 135
              K        +ST++VEIEL VPDILP                               
Sbjct: 144 SFFKM-------FSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVIL 203

[Close]
BLAST of Tan0004223 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 4.0e-10
Identity = 58/144 (40.28%), Postives = 65/144 (45.14%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+RSS+QT  + +       T    LSTLSVLRDN+ VVSAG     +      R PLH
Sbjct: 521 RGNRSSLQTGELDK-------TVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLH 580

Query: 78  RE-SKRWFSSGVP-------------YSTWIVEIELLVPDILPY---------------- 130
           R  SKRW     P                  VEIEL VPD LP                 
Sbjct: 581 RRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGIVR 640

[Close]
BLAST of Tan0004223 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 4.0e-10
Identity = 58/144 (40.28%), Postives = 65/144 (45.14%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+RSS+QT  + +       T    LSTLSVLRDN+ VVSAG     +      R PLH
Sbjct: 107 RGNRSSLQTGELDK-------TVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLH 166

Query: 78  RE-SKRWFSSGVP-------------YSTWIVEIELLVPDILPY---------------- 130
           R  SKRW     P                  VEIEL VPD LP                 
Sbjct: 167 RRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGIVR 226

[Close]
BLAST of Tan0004223 vs. NCBI nr
Match: KAA0045180.1 (uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-10
Identity = 56/159 (35.22%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MVGKLIEFPTTFVKQSTRGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAG 60
           MVGKLI++PTT +K   RG+R S+QT  + + + +        LSTLSVL DN+ VVSAG
Sbjct: 109 MVGKLIQYPTTVMKILPRGNRPSLQTGELDKTVIF-------SLSTLSVLCDNDDVVSAG 168

Query: 61  RAPLRQRRW-----VLRRTPLHRESKRWFSSGVPYSTW--IVEIELLVPDILPY------ 120
           RA LRQRRW     +    P    +    S   P   W  I+ + +L   +  +      
Sbjct: 169 RALLRQRRWECQVEIELPVPDTLPTSAKVSDQTPVRGWSCILSLSMLKCFVRLFYKPSDV 228

Query: 121 ------------------NVCWLHSSFRAKLAGGSGGGV 129
                             +VC +H+ F+AK AG  GGGV
Sbjct: 229 RAASYVCWEGSAGIVRGDDVCSIHAVFQAKTAGAPGGGV 260

[Close]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.7e-17
Identity = 67/166 (40.36%), Postives = 79/166 (47.59%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+R S+QT  I + + +        LSTLSVL DN+ VVSAG+APLRQRRW  R  P  
Sbjct: 84  RGNRLSLQTEEIDKTVIF-------PLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTT 143

Query: 78  RESKRWFSSGVPYSTWIVEIELLVPDILPY------------------------------ 135
              K        +ST++VEIEL VPDILP                               
Sbjct: 144 SFFKM-------FSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVIL 203

[Close]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.7e-17
Identity = 67/166 (40.36%), Postives = 79/166 (47.59%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+R S+QT  I + + +        LSTLSVL DN+ VVSAG+APLRQRRW  R  P  
Sbjct: 84  RGNRLSLQTEEIDKTVIF-------PLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTT 143

Query: 78  RESKRWFSSGVPYSTWIVEIELLVPDILPY------------------------------ 135
              K        +ST++VEIEL VPDILP                               
Sbjct: 144 SFFKM-------FSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVIL 203

[Close]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 58/144 (40.28%), Postives = 65/144 (45.14%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+RSS+QT  + +       T    LSTLSVLRDN+ VVSAG     +      R PLH
Sbjct: 521 RGNRSSLQTGELDK-------TVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLH 580

Query: 78  RE-SKRWFSSGVP-------------YSTWIVEIELLVPDILPY---------------- 130
           R  SKRW     P                  VEIEL VPD LP                 
Sbjct: 581 RRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGIVR 640

[Close]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 58/144 (40.28%), Postives = 65/144 (45.14%), Query Frame = 0 

Query: 18  RGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAGRAPLRQRRWVLRRTPLH 77
           RG+RSS+QT  + +       T    LSTLSVLRDN+ VVSAG     +      R PLH
Sbjct: 107 RGNRSSLQTGELDK-------TVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLH 166

Query: 78  RE-SKRWFSSGVP-------------YSTWIVEIELLVPDILPY---------------- 130
           R  SKRW     P                  VEIEL VPD LP                 
Sbjct: 167 RRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGIVR 226

[Close]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match: A0A5A7TPS6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001810 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.3e-10
Identity = 56/159 (35.22%), Postives = 77/159 (48.43%), Query Frame = 0 

Query: 1   MVGKLIEFPTTFVKQSTRGDRSSVQTNVIPEALWYLVHTGHILLSTLSVLRDNNVVVSAG 60
           MVGKLI++PTT +K   RG+R S+QT  + + + +        LSTLSVL DN+ VVSAG
Sbjct: 109 MVGKLIQYPTTVMKILPRGNRPSLQTGELDKTVIF-------SLSTLSVLCDNDDVVSAG 168

Query: 61  RAPLRQRRW-----VLRRTPLHRESKRWFSSGVPYSTW--IVEIELLVPDILPY------ 120
           RA LRQRRW     +    P    +    S   P   W  I+ + +L   +  +      
Sbjct: 169 RALLRQRRWECQVEIELPVPDTLPTSAKVSDQTPVRGWSCILSLSMLKCFVRLFYKPSDV 228

Query: 121 ------------------NVCWLHSSFRAKLAGGSGGGV 129
                             +VC +H+ F+AK AG  GGGV
Sbjct: 229 RAASYVCWEGSAGIVRGDDVCSIHAVFQAKTAGAPGGGV 260

The following BLAST results are available for this feature:
BLAST of Tan0004223 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0004223 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037581.19.8e-1740.36reverse transcriptase [Cucumis melo var. makuwa][more]
TYK03091.19.8e-1740.36reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0065516.14.0e-1040.28uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa][more]
TYJ98800.14.0e-1040.28uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa][more]
KAA0045180.18.8e-1035.22uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa][more]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BTP34.7e-1740.36Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M64.7e-1740.36Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5A7VGQ51.9e-1040.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BG851.9e-1040.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TPS64.3e-1035.22Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Tan0004223 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004223.1Tan0004223.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity