Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATTCCAATTCCAATTCAAATTCCAATAATTTCAATTCCAATCTTGGAGTCGTTAGCTCAATCCTAGTTTTCGTTTTTGGTCTTTTTTTCTTCAGTGCCGTTCTCTTACATGCAGATACGGGACCCCCAAACGTCGTCGCATCGAGCATCTGCCCGAAAACCAGAAACTCCTCTTTATGTCGGAGCGTATTGAAACCCGCGGGCAGTACTGATGCCCTATTCTTGGCCAATTACACTCTCCACTTTGCCTGTACGCGCGCCGCCGAAAATCTCCGCCACGCGCGGCGACTTGCGGCGGCGACGGCCAATCCACAGCTTAAAAAACGCTATTTGGAGTGCTCACGACGGTTTGACTTTGTGGTGAAGGGTATAGAAGAAGGCAAACAAGCGTTGGCCACAGGTGGCTATATTCAACTCAGCCATGCCACCGGCACCGCCGTGGCCCATGCCGACGGCTGTCTAAAAACCTTTAAAAACCCGCCGCCGGAACCGTCGGCGCTGCCGAAGAAGGCCGAGAATCTGGGAGATATTTGTGACATTGCTGTTTCTGTGTCCAGTATTCTGGCAGGAGAAGATTATTAA
mRNA sequence
ATGGCGAATTCCAATTCCAATTCAAATTCCAATAATTTCAATTCCAATCTTGGAGTCGTTAGCTCAATCCTAGTTTTCGTTTTTGGTCTTTTTTTCTTCAGTGCCGTTCTCTTACATGCAGATACGGGACCCCCAAACGTCGTCGCATCGAGCATCTGCCCGAAAACCAGAAACTCCTCTTTATGTCGGAGCGTATTGAAACCCGCGGGCAGTACTGATGCCCTATTCTTGGCCAATTACACTCTCCACTTTGCCTGTACGCGCGCCGCCGAAAATCTCCGCCACGCGCGGCGACTTGCGGCGGCGACGGCCAATCCACAGCTTAAAAAACGCTATTTGGAGTGCTCACGACGGTTTGACTTTGTGGTGAAGGGTATAGAAGAAGGCAAACAAGCGTTGGCCACAGGTGGCTATATTCAACTCAGCCATGCCACCGGCACCGCCGTGGCCCATGCCGACGGCTGTCTAAAAACCTTTAAAAACCCGCCGCCGGAACCGTCGGCGCTGCCGAAGAAGGCCGAGAATCTGGGAGATATTTGTGACATTGCTGTTTCTGTGTCCAGTATTCTGGCAGGAGAAGATTATTAA
Coding sequence (CDS)
ATGGCGAATTCCAATTCCAATTCAAATTCCAATAATTTCAATTCCAATCTTGGAGTCGTTAGCTCAATCCTAGTTTTCGTTTTTGGTCTTTTTTTCTTCAGTGCCGTTCTCTTACATGCAGATACGGGACCCCCAAACGTCGTCGCATCGAGCATCTGCCCGAAAACCAGAAACTCCTCTTTATGTCGGAGCGTATTGAAACCCGCGGGCAGTACTGATGCCCTATTCTTGGCCAATTACACTCTCCACTTTGCCTGTACGCGCGCCGCCGAAAATCTCCGCCACGCGCGGCGACTTGCGGCGGCGACGGCCAATCCACAGCTTAAAAAACGCTATTTGGAGTGCTCACGACGGTTTGACTTTGTGGTGAAGGGTATAGAAGAAGGCAAACAAGCGTTGGCCACAGGTGGCTATATTCAACTCAGCCATGCCACCGGCACCGCCGTGGCCCATGCCGACGGCTGTCTAAAAACCTTTAAAAACCCGCCGCCGGAACCGTCGGCGCTGCCGAAGAAGGCCGAGAATCTGGGAGATATTTGTGACATTGCTGTTTCTGTGTCCAGTATTCTGGCAGGAGAAGATTATTAA
Protein sequence
MANSNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCRSVLKPAGSTDALFLANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDFVVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICDIAVSVSSILAGEDY
Homology
BLAST of Tan0004174 vs. ExPASy Swiss-Prot
Match:
P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)
HSP 1 Score: 78.6 bits (192), Expect = 8.9e-14
Identity = 54/176 (30.68%), Postives = 82/176 (46.59%), Query Frame = 0
Query: 20 VSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCRSVLKP---AGSTDALF 79
VS +LV + F S + N + S ICPKTRN SLC L+ + S D
Sbjct: 12 VSLLLV----ILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKG 71
Query: 80 LANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDFVVKGIEEGKQALATG 139
L +++ A A + + L +P+LK RY CS + + + + KQ L +G
Sbjct: 72 LGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSG 131
Query: 140 GYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICDIAVSVSSILAG 193
Y L+ A A C +F+ PP P+ L + L D+CDI + +S++L G
Sbjct: 132 DYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLPG 183
BLAST of Tan0004174 vs. NCBI nr
Match:
XP_004148232.1 (pectinesterase inhibitor [Cucumis sativus])
HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62
Identity = 133/197 (67.51%), Postives = 153/197 (77.66%), Query Frame = 0
Query: 1 MANSNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSS 60
M N N NS +FNSNLGVVSSIL+F+FGLFFFS VLLHADTG PNV+ ++ICPKTRNS+
Sbjct: 1 MGNLNPNS---SFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVLTTTICPKTRNST 60
Query: 61 LCRSVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRR 120
C++VLKP G +DA L ANYTL FA T E L HA+RLA +P LK+RY ECSRR
Sbjct: 61 FCKTVLKPVGKSDAALLKVANYTLTFAHTTTVEGLHHAQRLATEATDPLLKQRYSECSRR 120
Query: 121 FDFVVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGD 180
FDFV KG+EE +ALA GGYI LSHATG AV AD C+ FK PPPEPS LP+KA+N+GD
Sbjct: 121 FDFVTKGLEEAIEALAKGGYIPLSHATGAAVVEADRCVNMFKKPPPEPSKLPEKAKNIGD 180
Query: 181 ICDIAVSVSSILAGEDY 196
ICDIAVSVS+IL EDY
Sbjct: 181 ICDIAVSVSNILT-EDY 193
BLAST of Tan0004174 vs. NCBI nr
Match:
XP_008458686.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >TYK02951.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 240.4 bits (612), Expect = 1.3e-59
Identity = 130/194 (67.01%), Postives = 151/194 (77.84%), Query Frame = 0
Query: 4 SNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCR 63
SN N NS +FNSNLGVVSSIL+F+FGLFFFS VLLHADTG PNV+ S+ICPKTRNS+LC+
Sbjct: 3 SNLNPNS-SFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVITSTICPKTRNSTLCK 62
Query: 64 SVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDF 123
+VLKP G +DA L ANY+L A T E L+HA+RLA +P LK+RY ECSRRFD
Sbjct: 63 TVLKPVGKSDAALLKVANYSLTLAHTTTVEGLQHAQRLANDATDPLLKQRYSECSRRFDS 122
Query: 124 VVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICD 183
+ KG+EE ALA G YI LSHATG AV ADGC+ FK PPEPS LP+KA+N+GDICD
Sbjct: 123 MTKGLEEAIAALAKGEYIPLSHATGAAVVDADGCVDMFKKRPPEPSKLPEKAKNIGDICD 182
Query: 184 IAVSVSSILAGEDY 196
IAVSVS+IL EDY
Sbjct: 183 IAVSVSNILT-EDY 194
BLAST of Tan0004174 vs. NCBI nr
Match:
KAE8647076.1 (hypothetical protein Csa_023043 [Cucumis sativus])
HSP 1 Score: 204.5 bits (519), Expect = 8.2e-49
Identity = 103/157 (65.61%), Postives = 120/157 (76.43%), Query Frame = 0
Query: 41 DTGPPNVVASSICPKTRNSSLCRSVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARR 100
DTG PNV+ ++ICPKTRNS+ C++VLKP G +DA L ANYTL FA T E L HA+R
Sbjct: 2 DTGSPNVLTTTICPKTRNSTFCKTVLKPVGKSDAALLKVANYTLTFAHTTTVEGLHHAQR 61
Query: 101 LAAATANPQLKKRYLECSRRFDFVVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKT 160
LA +P LK+RY ECSRRFDFV KG+EE +ALA GGYI LSHATG AV AD C+
Sbjct: 62 LATEATDPLLKQRYSECSRRFDFVTKGLEEAIEALAKGGYIPLSHATGAAVVEADRCVNM 121
Query: 161 FKNPPPEPSALPKKAENLGDICDIAVSVSSILAGEDY 196
FK PPPEPS LP+KA+N+GDICDIAVSVS+IL EDY
Sbjct: 122 FKKPPPEPSKLPEKAKNIGDICDIAVSVSNILT-EDY 157
BLAST of Tan0004174 vs. NCBI nr
Match:
XP_023548317.1 (pectinesterase inhibitor-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 156.4 bits (394), Expect = 2.6e-34
Identity = 88/180 (48.89%), Postives = 110/180 (61.11%), Query Frame = 0
Query: 17 LGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCRSVLKPAGSTDALF 76
+GV S + + + + FF VL HADT P N S+ICP+TRN SLCR +LKP + +A
Sbjct: 1 MGVFSYVKLSLCCVLFFGIVLSHADTTPQNDTVSTICPQTRNPSLCRQLLKPVSNLNATN 60
Query: 77 LANYTLHFACTRAAENLRHARRL-AAATANPQLKKRYLECSRRFDFVVKGIEEGKQALAT 136
+ANY + A T A E R +RL A T N +LKKRY EC + D V IE GKQ +
Sbjct: 61 MANYMIDLAHTNAVECRRRVQRLKAEETTNLELKKRYSECWQCIDSSVSAIESGKQYMEY 120
Query: 137 GGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICDIAVSVSSILAGEDY 196
YI L+ A +H D CL TF PPPEPS+LPK +NLGDIC I V+ ILAG+DY
Sbjct: 121 KNYIALTIQIIGAGSHTDQCLDTFNQPPPEPSSLPKNVKNLGDICYITSYVTHILAGDDY 180
BLAST of Tan0004174 vs. NCBI nr
Match:
XP_038876296.1 (pectinesterase inhibitor-like [Benincasa hispida])
HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 82/190 (43.16%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MANSNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSS 60
M NSNSN N G+ SSI VF+F L + + L A T N + SSIC KT N S
Sbjct: 1 MTNSNSNLNR-------GISSSISVFIFCLLLSNVIPLDAGTTLSNNIKSSICLKTSNPS 60
Query: 61 LCRSVLKPAGSTDALFLANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFD 120
C ++LK AGSTD LA YTL+ A A +++ A+ LAA T N QLKKRYL CS +D
Sbjct: 61 FCTNLLKSAGSTDLKALATYTLNLAHKNAGKSMTLAKSLAATTTNSQLKKRYLSCSENYD 120
Query: 121 FVVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDIC 180
+ IE ++ LATG + ++ AT + + C +F++PP + S LPKK++ L DIC
Sbjct: 121 EAIGDIENAQKYLATGDFNGVNLATSGIMTTINDCQDSFEHPPRDHSLLPKKSKTLKDIC 180
Query: 181 DIAVSVSSIL 191
I + +S++L
Sbjct: 181 SIILVISNLL 183
BLAST of Tan0004174 vs. ExPASy TrEMBL
Match:
A0A0A0KHY0 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G307370 PE=4 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 4.8e-63
Identity = 133/197 (67.51%), Postives = 153/197 (77.66%), Query Frame = 0
Query: 1 MANSNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSS 60
M N N NS +FNSNLGVVSSIL+F+FGLFFFS VLLHADTG PNV+ ++ICPKTRNS+
Sbjct: 1 MGNLNPNS---SFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVLTTTICPKTRNST 60
Query: 61 LCRSVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRR 120
C++VLKP G +DA L ANYTL FA T E L HA+RLA +P LK+RY ECSRR
Sbjct: 61 FCKTVLKPVGKSDAALLKVANYTLTFAHTTTVEGLHHAQRLATEATDPLLKQRYSECSRR 120
Query: 121 FDFVVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGD 180
FDFV KG+EE +ALA GGYI LSHATG AV AD C+ FK PPPEPS LP+KA+N+GD
Sbjct: 121 FDFVTKGLEEAIEALAKGGYIPLSHATGAAVVEADRCVNMFKKPPPEPSKLPEKAKNIGD 180
Query: 181 ICDIAVSVSSILAGEDY 196
ICDIAVSVS+IL EDY
Sbjct: 181 ICDIAVSVSNILT-EDY 193
BLAST of Tan0004174 vs. ExPASy TrEMBL
Match:
A0A5D3BT93 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00330 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 6.5e-60
Identity = 130/194 (67.01%), Postives = 151/194 (77.84%), Query Frame = 0
Query: 4 SNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCR 63
SN N NS +FNSNLGVVSSIL+F+FGLFFFS VLLHADTG PNV+ S+ICPKTRNS+LC+
Sbjct: 3 SNLNPNS-SFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVITSTICPKTRNSTLCK 62
Query: 64 SVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDF 123
+VLKP G +DA L ANY+L A T E L+HA+RLA +P LK+RY ECSRRFD
Sbjct: 63 TVLKPVGKSDAALLKVANYSLTLAHTTTVEGLQHAQRLANDATDPLLKQRYSECSRRFDS 122
Query: 124 VVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICD 183
+ KG+EE ALA G YI LSHATG AV ADGC+ FK PPEPS LP+KA+N+GDICD
Sbjct: 123 MTKGLEEAIAALAKGEYIPLSHATGAAVVDADGCVDMFKKRPPEPSKLPEKAKNIGDICD 182
Query: 184 IAVSVSSILAGEDY 196
IAVSVS+IL EDY
Sbjct: 183 IAVSVSNILT-EDY 194
BLAST of Tan0004174 vs. ExPASy TrEMBL
Match:
A0A1S3C7Z4 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498015 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 6.5e-60
Identity = 130/194 (67.01%), Postives = 151/194 (77.84%), Query Frame = 0
Query: 4 SNSNSNSNNFNSNLGVVSSILVFVFGLFFFSAVLLHADTGPPNVVASSICPKTRNSSLCR 63
SN N NS +FNSNLGVVSSIL+F+FGLFFFS VLLHADTG PNV+ S+ICPKTRNS+LC+
Sbjct: 3 SNLNPNS-SFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVITSTICPKTRNSTLCK 62
Query: 64 SVLKPAGSTDALFL--ANYTLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDF 123
+VLKP G +DA L ANY+L A T E L+HA+RLA +P LK+RY ECSRRFD
Sbjct: 63 TVLKPVGKSDAALLKVANYSLTLAHTTTVEGLQHAQRLANDATDPLLKQRYSECSRRFDS 122
Query: 124 VVKGIEEGKQALATGGYIQLSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICD 183
+ KG+EE ALA G YI LSHATG AV ADGC+ FK PPEPS LP+KA+N+GDICD
Sbjct: 123 MTKGLEEAIAALAKGEYIPLSHATGAAVVDADGCVDMFKKRPPEPSKLPEKAKNIGDICD 182
Query: 184 IAVSVSSILAGEDY 196
IAVSVS+IL EDY
Sbjct: 183 IAVSVSNILT-EDY 194
BLAST of Tan0004174 vs. ExPASy TrEMBL
Match:
A0A5D3BTG4 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00350 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27
Identity = 77/170 (45.29%), Postives = 100/170 (58.82%), Query Frame = 0
Query: 22 SILVFVFGLFFFSAVLLHADT-GPPNVVASSICPKTRNSSLCRSVLKPAGSTDALFLANY 81
+ILVFV F + V A+T P N VASSICPKTRN S C VLK AGSTD LA Y
Sbjct: 15 AILVFVCSFLFSNVVSSRANTITPSNDVASSICPKTRNPSFCVDVLKSAGSTDLKVLATY 74
Query: 82 TLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDFVVKGIEEGKQALATGGYIQ 141
TL+ T A ++L + LAA T NPQLK +YL C ++ VV IE K LA+G +
Sbjct: 75 TLNLTNTNAEKSLNLVKSLAATTTNPQLKNQYLSCYESYEEVVGDIEIAKSNLASGDFNG 134
Query: 142 LSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICDIAVSVSSIL 191
++ AT + D C +FK PP + S L K + L D+C I + +S++L
Sbjct: 135 VNIATSGIMTAVDDCQDSFKQPPKDTSMLLKNGKTLNDVCSIILVISNLL 184
BLAST of Tan0004174 vs. ExPASy TrEMBL
Match:
A0A1S3C905 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498013 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27
Identity = 77/170 (45.29%), Postives = 100/170 (58.82%), Query Frame = 0
Query: 22 SILVFVFGLFFFSAVLLHADT-GPPNVVASSICPKTRNSSLCRSVLKPAGSTDALFLANY 81
+ILVFV F + V A+T P N VASSICPKTRN S C VLK AGSTD LA Y
Sbjct: 15 AILVFVCSFLFSNVVSSRANTITPSNDVASSICPKTRNPSFCVDVLKSAGSTDLKVLATY 74
Query: 82 TLHFACTRAAENLRHARRLAAATANPQLKKRYLECSRRFDFVVKGIEEGKQALATGGYIQ 141
TL+ T A ++L + LAA T NPQLK +YL C ++ VV IE K LA+G +
Sbjct: 75 TLNLTNTNAEKSLNLVKSLAATTTNPQLKNQYLSCYESYEEVVGDIEIAKSNLASGDFNG 134
Query: 142 LSHATGTAVAHADGCLKTFKNPPPEPSALPKKAENLGDICDIAVSVSSIL 191
++ AT + D C +FK PP + S L K + L D+C I + +S++L
Sbjct: 135 VNIATSGIMTAVDDCQDSFKQPPKDTSMLLKNGKTLNDVCSIILVISNLL 184
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P83326 | 8.9e-14 | 30.68 | Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KHY0 | 4.8e-63 | 67.51 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G307370 PE=4 S... | [more] |
A0A5D3BT93 | 6.5e-60 | 67.01 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3C7Z4 | 6.5e-60 | 67.01 | pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498015 PE=4 SV=1 | [more] |
A0A5D3BTG4 | 2.5e-27 | 45.29 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3C905 | 2.5e-27 | 45.29 | pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498013 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |