Tan0004036 (gene) Snake gourd v1

Overview


Name	Tan0004036
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	SWI/SNF complex component SNF12 homolog
Location	LG07: 3299547 .. 3303314 (-)
RNA-Seq Expression	Tan0004036
Synteny	Tan0004036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTGGTTTGTAAAGAGAGAAAGACAAACAGTGAGAAGAGAGAAGCCATTGGGAAAGCGCCTTCTCTCTCTCTCTTCCTTCTCGCTTCTCTCACTTTTCCACCTTCCCATTTTGTTTCTGTTCTAAGCTTACAGAAGAAAAGCTTCACTTCCAGTCTCTTCTCCATCTCTGTAAGCCCTTCAATTCACTCCACTACCCTTTTTTCTCAATTTCAATTTCCATCCCTTCTGTGTTTTCCTTCAATTTCATCTCTCAAACCCTTCAATCCATGCTCCCCTTCCGTTTTTGTAATGTGGGTCGTGTAATTTGATCGATTTCGTTCGTGATTTTCATTGTTTCTCCTCCTCTGAACTCTTTCGGCTTAGGGTTTTTGACGTCTCGATGTGGTGTTAGGGTTTTCGCTACGCTTGGCTTGATTTTCTGGAATTTTGACATTTGGGTTCTGCTGCTGCTGCTCTATTTCTTCGAAGAGGCTCGAATTTTTGTACTGTTAGGTATTTTTTTTCCTTCTTGTTACTGTTTTTTATGTGTATTGGATCAAAAGTCTGAGATACGCTTTGATTCTTTGGGGGTTTGAGGTTTTGCTTTTGGCTAGATTTGGGGGCAATGCTTATATACAGGTTTGAGATTTTGTTCGTTTTGAACTGTTCTGGTTAGAGTAATTGGTTAGATAGTGATGTCTATGAACAATAATAACCCACCGAAGAGCCTTGGGGGGGCCTCTTCGTCGCCTTTTGGAAATTCTGGGATAGTTCCACCATCTATGGCAGCAAATTCCACATTTTCCCCGCAAGCTCAATCTCACTTAGGAGCTGGGTTTCAAACCCCATTTCAGCTAACCCCTGCTCAGGCTTTGGCTCAAGCTCAGTTAAAGGCTCATGCCCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTACAAGCCCAAGGGCTGTCCCTAACTCAGAGCCAGACTGTTGGTGGTGGGAACATGGGTTCTCCTTTGCAGGGATTTTCCACACCGGGCCTCGCAGGTGCGAAGCGGATTTCTCAGAAGCCACCAGTTCGACCGCCTATTCTTTCCCCTGCTACCACGTTTTCTCCATTGAAAACAATGGAACTAACGCCTGCTGCTCGGAAAAAGAAGCAGAAGCTACCGGAGAAGCAGCTTCAAGACAAAGTTGCTGCTATCTTACCTGAGTCTGCTCTCTACACTCAGCTGCTTGAATTTGAGTCTCGTGTTGACGCTGCACTTGCAAGAAAGAAAGTTGACATCCACGAAGCACTTAAGAACCCACCTTGCATTCAGAAAACTCTTGAATTTATGTCTTCAACACATTTGCAAATCAAGTTAACACAGTACCCAAAAAACCGAATGCCGATCCTCCTACTTGGACCCTTAAGATAATAGGAAGAATCTTGGAAGATGGGATAGATCCTGATCATCCTGGGGTGGTACAAAGATCAAACCCTTTGTACCCAAAATTTTCATCTTTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGCATGGGAGAACGCTAGGTCACCTGCACCTCATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTTCAGTTAACATTCGGTTAGAAATGAATTATATTCCAGAGAAATTCAAGCTGTCGCCTGCTTTAATGGAGGTTCTTGGTATTGAAGTTGATACTCGCCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTAGGAAACTTCAGAATCCCAACGATCCATCTATCTTTCATTGTGATCCACCTCTTCAGAAGGTATTTGGGGAAGACAGGTTGAAATTCACCATGGTTTCACAGAGAATATCACAACACTTGTTCCCTCCCGCAGCCTATACATCTGGAACATAAGATTAAGCTTTGGGAATAGTCCAGCCGGTACAGCATGTTATGATGTGTTGGTTGATGTGCCTTTTCAATTCATAGGAATTGTCTGCTCTATTAGCCAATGCAGAGAAGAACAAGGAGATTGATGCATGTGATGAAGCAATATGTGCAGCTATAAGGAAAATTCATGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCCCCAGTGGAGTTTATTGATGCCTTGATTGAATCTCAAAGCAAGGATCTAAAACTTCTTGCAGGAGAAGCTAGTCGAAATGCTGAAAAGGAGAGGCGGTCAGATTTCTTCAATCAGCCATGGTAAGTTTGTTCTCAATCCCAACTGTTGTTTATACTTCTTATCCTTATATTCATTCATTCACAATTCATAGGTTAGCTCGGTGGATTTGCAATTTTCTATTTCTCTTTTTAACAACTAAGCCATCGTTTGATAAACTATTTTGGTTTTTGGCTTTCTATTTTTGAAAAGTAAGCTTATAAACACTACTATTACCTATAGTTTTCTTTTTTAAAAACGTTTTCGAAAATCAAGCCAAACTTTGAAAACTAAAAAAATGTAGTTTTTGAAAACTTGATTTTGTTTATGAAATTTGGCTTAGAATTGAAATGTGTTTGGAAGGAAACGGAAAGCTCGCCAAAAAAAAAATTGTGAGAGGACAAGCATAATTTTTTGTTTATGAAATTTGGTCTGGAAGTCAAATGTGTTTTTAAGGAGGAGAGTGAGAAAGGCTTGCCATAAAACTTTTGAGAAAGCAAGCATAATTTGTGTATTTCACACTGATGGCTGTGTATGGATGGGACCTGAAAAGATATATCCTTAGCTTCCCCCCCTTCTCTCTAGCTGTTTTGTTTTTTGCATCATAGACAAAAGTTATGCTATATGTTGTTTTGAGTCTCTTTTCTAAAAATGAGATCATTCTTCAAGCTTTTTGCTTGCCCTCTCGCACAGAATTTTCAATGGGCTAAAGATTCTAATATGGGGATTACCTGTTATATTCCTCTTATCATTTTGAGCATGATTTTAAAATCCATGGTTGACTAAACAGGGTTGAAGATGCTGTCATCCGGTACATAAATCGAAAACCAACTACAGGAAGCGACGCACCTGGAAGTACATGACTGGGATCTGGTTGAGCTGCTATGGATTGCCATTTTTGTTTGGAGCTTCATTGGATTAGCATGCTAAGATACATGTATGACACCCTTTAGTTTATTAGCGAACACCCAATCATTGCGATGCTATGAATGCTTCATTAACACATATGGTATGTGAATTCCACAAACATGCTCTTTAGTCCAAGCAAGCATTATCCATCAATTAGCTGGTGATGAAAATGCTTCATGAACAACATATGGTTTCTTCTTAGTCATTTTCTTAGAGCATCCTTTGTTGTAGTATAGAATATTTCTGGTAGTAGATTTGCAGCCATATACAGTGGAGATTTTTTTCTGGTAAAGCTTTGTGAAGATGAAAGTCCATGATGATTTGTTAATTCCACTTGGAACTTTAACAATTATTCGTTGAACGTGTAGTTTATCATTTCCAAATATCATGTTTCTTGATATTTAAAGGTGCAACTGGGAAACTGGCCGATCTATTTCTGGGTTTGATCGACACCATTTAGGGTGCGTTTGGCGCGTAGAGTTAAGTTGAGTTGAGTTGAGTTGAGTTGTGCAGAGTTGAGTTGAGTTGAGTGAAGGAAATCTGTGTTTGGGGTGCAGAGTTGAGTTGAGTTGTTGCAGGAAGTCTGTTTTTGGAGTGCAGAGTTGAGTTGAGTTGTGCAGAGGTATTTGGTTCAATTTTTTTTTAAAATCAAATAATCAGTTTTTATCTT

mRNA sequence

AAATTTGGTTTGTAAAGAGAGAAAGACAAACAGTGAGAAGAGAGAAGCCATTGGGAAAGCGCCTTCTCTCTCTCTCTTCCTTCTCGCTTCTCTCACTTTTCCACCTTCCCATTTTGTTTCTGTTCTAAGCTTACAGAAGAAAAGCTTCACTTCCAGTCTCTTCTCCATCTCTGTAAGCCCTTCAATTCACTCCACTACCCTTTTTTCTCAATTTCAATTTCCATCCCTTCTGTGTTTTCCTTCAATTTCATCTCTCAAACCCTTCAATCCATGCTCCCCTTCCGTTTTTGTAATGTGGGTCGTGTAATTTGATCGATTTCGTTCGTGATTTTCATTGTTTCTCCTCCTCTGAACTCTTTCGGCTTAGGGTTTTTGACGTCTCGATGTGGTGTTAGGGTTTTCGCTACGCTTGGCTTGATTTTCTGGAATTTTGACATTTGGGTTCTGCTGCTGCTGCTCTATTTCTTCGAAGAGGCTCGAATTTTTGTACTGTTAGGTATTTTTTTTCCTTCTTGTTACTGTTTTTTATGTGTATTGGATCAAAAGTCTGAGATACGCTTTGATTCTTTGGGGGTTTGAGGTTTTGCTTTTGGCTAGATTTGGGGGCAATGCTTATATACAGGTTTGAGATTTTGTTCGTTTTGAACTGTTCTGGTTAGAGTAATTGGTTAGATAGTGATGTCTATGAACAATAATAACCCACCGAAGAGCCTTGGGGGGGCCTCTTCGTCGCCTTTTGGAAATTCTGGGATAGTTCCACCATCTATGGCAGCAAATTCCACATTTTCCCCGCAAGCTCAATCTCACTTAGGAGCTGGGTTTCAAACCCCATTTCAGCTAACCCCTGCTCAGGCTTTGGCTCAAGCTCAGTTAAAGGCTCATGCCCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTACAAGCCCAAGGGCTGTCCCTAACTCAGAGCCAGACTGTTGGTGGTGGGAACATGGGTTCTCCTTTGCAGGGATTTTCCACACCGGGCCTCGCAGGTGCGAAGCGGATTTCTCAGAAGCCACCAGTTCGACCGCCTATTCTTTCCCCTGCTACCACGTTTTCTCCATTGAAAACAATGGAACTAACGCCTGCTGCTCGGAAAAAGAAGCAGAAGCTACCGGAGAAGCAGCTTCAAGACAAAGTTGCTGCTATCTTACCTGAGTCTGCTCTCTACACTCAGCTGCTTGAATTTGAGTCTCGTGTTGACGCTGCACTTGCAAGAAAGAAAGTTGACATCCACGAAGCACTTAAGAACCCACCTTTTAACACAGTACCCAAAAAACCGAATGCCGATCCTCCTACTTGGACCCTTAAGATAATAGGAAGAATCTTGGAAGATGGGATAGATCCTGATCATCCTGGGGTGGTACAAAGATCAAACCCTTTGTACCCAAAATTTTCATCTTTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGCATGGGAGAACGCTAGGTCACCTGCACCTCATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTTCAGTTAACATTCGGTTAGAAATGAATTATATTCCAGAGAAATTCAAGCTGTCGCCTGCTTTAATGGAGGTTCTTGGTATTGAAGTTGATACTCGCCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTAGGAAACTTCAGAATCCCAACGATCCATCTATCTTTCATTGTGATCCACCTCTTCAGAAGGTATTTGGGGAAGACAGGTTGAAATTCACCATGGAATTGTCTGCTCTATTAGCCAATGCAGAGAAGAACAAGGAGATTGATGCATGTGATGAAGCAATATGTGCAGCTATAAGGAAAATTCATGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCCCCAGTGGAGTTTATTGATGCCTTGATTGAATCTCAAAGCAAGGATCTAAAACTTCTTGCAGGAGAAGCTAGTCGAAATGCTGAAAAGGAGAGGCGGTCAGATTTCTTCAATCAGCCATGGGTTGAAGATGCTGTCATCCGGTACATAAATCGAAAACCAACTACAGGAAGCGACGCACCTGGAAGTACATGACTGGGATCTGGTTGAGCTGCTATGGATTGCCATTTTTGTTTGGAGCTTCATTGGATTAGCATGCTAAGATACATGTATGACACCCTTTAGTTTATTAGCGAACACCCAATCATTGCGATGCTATGAATGCTTCATTAACACATATGGTATGTGAATTCCACAAACATGCTCTTTAGTCCAAGCAAGCATTATCCATCAATTAGCTGGTGATGAAAATGCTTCATGAACAACATATGGTTTCTTCTTAGTCATTTTCTTAGAGCATCCTTTGTTGTAGTATAGAATATTTCTGGTAGTAGATTTGCAGCCATATACAGTGGAGATTTTTTTCTGGTAAAGCTTTGTGAAGATGAAAGTCCATGATGATTTGTTAATTCCACTTGGAACTTTAACAATTATTCGTTGAACGTGTAGTTTATCATTTCCAAATATCATGTTTCTTGATATTTAAAGGTGCAACTGGGAAACTGGCCGATCTATTTCTGGGTTTGATCGACACCATTTAGGGTGCGTTTGGCGCGTAGAGTTAAGTTGAGTTGAGTTGAGTTGAGTTGTGCAGAGTTGAGTTGAGTTGAGTGAAGGAAATCTGTGTTTGGGGTGCAGAGTTGAGTTGAGTTGTTGCAGGAAGTCTGTTTTTGGAGTGCAGAGTTGAGTTGAGTTGTGCAGAGGTATTTGGTTCAATTTTTTTTTAAAATCAAATAATCAGTTTTTATCTT

Coding sequence (CDS)

ATGTCTATGAACAATAATAACCCACCGAAGAGCCTTGGGGGGGCCTCTTCGTCGCCTTTTGGAAATTCTGGGATAGTTCCACCATCTATGGCAGCAAATTCCACATTTTCCCCGCAAGCTCAATCTCACTTAGGAGCTGGGTTTCAAACCCCATTTCAGCTAACCCCTGCTCAGGCTTTGGCTCAAGCTCAGTTAAAGGCTCATGCCCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTACAAGCCCAAGGGCTGTCCCTAACTCAGAGCCAGACTGTTGGTGGTGGGAACATGGGTTCTCCTTTGCAGGGATTTTCCACACCGGGCCTCGCAGGTGCGAAGCGGATTTCTCAGAAGCCACCAGTTCGACCGCCTATTCTTTCCCCTGCTACCACGTTTTCTCCATTGAAAACAATGGAACTAACGCCTGCTGCTCGGAAAAAGAAGCAGAAGCTACCGGAGAAGCAGCTTCAAGACAAAGTTGCTGCTATCTTACCTGAGTCTGCTCTCTACACTCAGCTGCTTGAATTTGAGTCTCGTGTTGACGCTGCACTTGCAAGAAAGAAAGTTGACATCCACGAAGCACTTAAGAACCCACCTTTTAACACAGTACCCAAAAAACCGAATGCCGATCCTCCTACTTGGACCCTTAAGATAATAGGAAGAATCTTGGAAGATGGGATAGATCCTGATCATCCTGGGGTGGTACAAAGATCAAACCCTTTGTACCCAAAATTTTCATCTTTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGCATGGGAGAACGCTAGGTCACCTGCACCTCATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTTCAGTTAACATTCGGTTAGAAATGAATTATATTCCAGAGAAATTCAAGCTGTCGCCTGCTTTAATGGAGGTTCTTGGTATTGAAGTTGATACTCGCCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTAGGAAACTTCAGAATCCCAACGATCCATCTATCTTTCATTGTGATCCACCTCTTCAGAAGGTATTTGGGGAAGACAGGTTGAAATTCACCATGGAATTGTCTGCTCTATTAGCCAATGCAGAGAAGAACAAGGAGATTGATGCATGTGATGAAGCAATATGTGCAGCTATAAGGAAAATTCATGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCCCCAGTGGAGTTTATTGATGCCTTGATTGAATCTCAAAGCAAGGATCTAAAACTTCTTGCAGGAGAAGCTAGTCGAAATGCTGAAAAGGAGAGGCGGTCAGATTTCTTCAATCAGCCATGGGTTGAAGATGCTGTCATCCGGTACATAAATCGAAAACCAACTACAGGAAGCGACGCACCTGGAAGTACATGA

Protein sequence

MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFSPQAQSHLGAGFQTPFQLTPAQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGAKRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPPFNTVPKKPNADPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTMELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPTTGSDAPGST

Homology

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BLAST of Tan0004036 vs. ExPASy Swiss-Prot
Match: Q9FMT4 (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14170 PE=1 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 4.5e-184
Identity = 355/545 (65.14%), Postives = 405/545 (74.31%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFSPQAQSHLGAGFQTPFQLTPAQAL 60
           MS NNNNP K  G A   PFGN G+   S+  N  F   AQSH+ A FQ  FQ + AQAL
Sbjct: 1   MSGNNNNPQKPQGSA-PLPFGNPGMASASVPGNQGF---AQSHMAANFQAQFQFSQAQAL 60

Query: 61  AQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQ-TVGGGNMGSPLQGFSTPGLAGAKR 120
                 AHAQAQ++   AQ QAQLQAQG+++ Q+Q + G G +G      +TPG    KR
Sbjct: 61  ------AHAQAQSK-VQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSSPSLTTPGSLNMKR 120

Query: 121 ISQKPPVRPPILSPAT--TFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
             QKPP+RPP  +PA+  T SP++TMELTPAARKKKQKLPEK LQ++VAAILPESALYTQ
Sbjct: 121 FQQKPPMRPP-GAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQ 180

Query: 181 LLEFESRVDAALARKKVDIHEALKNPPF-----------------NTVPKKPNADPPTWT 240
           LLEFESRVDAAL RKKVDI EALKNPP                  NT+P  PNADPPTWT
Sbjct: 181 LLEFESRVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWT 240

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDG+DPD PG VQ++NPL+PKFSSFFKRVT+SLDQRLYP++ +I WENARSP
Sbjct: 241 LKIIGRILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSP 300

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           AP EGFE+KRKG++EF+ +IRLEMNY+PEKFKLS ALM+VLGIEV+TRPRIIAAIWHYVK
Sbjct: 301 APQEGFEIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVK 360

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPS F+CD  LQKVFGE++LKFTM                            
Sbjct: 361 ARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNP 420

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             +L+ LLANAEKNKEI+ACDEAICAAIRKIHEHRRRRAFFLGF
Sbjct: 421 AVSACYDVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGF 480

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BLAST of Tan0004036 vs. ExPASy Swiss-Prot
Match: Q9VYG2 (Brahma-associated protein of 60 kDa OS=Drosophila melanogaster OX=7227 GN=Bap60 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.2e-53
Identity = 132/386 (34.20%), Postives = 195/386 (50.52%), Query Frame = 0


Query: 148 AARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPP--- 207
           A  KKK+KL EK L  KV  ++PES  Y  LL FE ++DA + RK++DI EALK P    
Sbjct: 122 ATAKKKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQK 181

Query: 208 -------FNTV--PKKPNAD-----PPTWTLKIIGRILEDGI-DPDHPGVVQRSNPLYPK 267
                   NT    K+P  D       +W L++ GR+LEDG  DP        +  +  K
Sbjct: 182 RKLRIFISNTFYPSKEPTNDGEEGAVASWELRVEGRLLEDGKGDP--------NTKIKRK 241

Query: 268 FSSFFKRVTISLDQRLY-PDSHIIAWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIP 327
           FSSFFK + I LD+ LY PD+H++ W    +    +GF+VKR GD+     I L ++Y P
Sbjct: 242 FSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQP 301

Query: 328 EKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIFHCDPPLQKVFGEDRL 387
            +FKL P L  +LG+   TRP II+A+W Y+K  KLQ+ ++    +CD  L+++F   R+
Sbjct: 302 LQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRM 361

Query: 388 KFT---------------------------------------------MELSALLANAEK 447
           KF                                               ++++ L +   
Sbjct: 362 KFAEIPQRLNPLLHPPDPIVINHFIESGAENKQTACYDIDVEVDDTLKNQMNSFLMSTAS 421

Query: 448 NKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRN 470
            +EI   D  I   +  I++ +  R FFL F++ P  FI   I S+++DLKL+  + + N
Sbjct: 422 QQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMT-DVAGN 481

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BLAST of Tan0004036 vs. ExPASy Swiss-Prot
Match: Q96GM5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens OX=9606 GN=SMARCD1 PE=1 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-51
Identity = 141/462 (30.52%), Postives = 216/462 (46.75%), Query Frame = 0


Query: 98  GGGNMGSPLQG--FSTPG-LAGAKRISQKPPVRP------PILSPATTFSPLKTMELTPA 157
           G G   SP+ G  +  PG L G++   Q P + P      P + P    S +      PA
Sbjct: 45  GQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPA 104

Query: 158 ARK----------------KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARK 217
            ++                KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK
Sbjct: 105 PQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRK 164

Query: 218 KVDIHEALKNP-------------PFNTVPKKPNADP-----PTWTLKIIGRILEDGIDP 277
           ++DI EALK P              FN  P K +A+       +W L++ GR+LED    
Sbjct: 165 RLDIQEALKRPIKQKRKLRIFISNTFN--PAKSDAEDGEGTVASWELRVEGRLLEDSALS 224

Query: 278 DHPGVVQRSNPLYPKFSSFFKRVTISLDQRLY-PDSHIIAWENARSPAPHEGFEVKRKGD 337
            +    Q+      KFSSFFK + I LD+ LY PD+H++ W    +    +GF+VKR GD
Sbjct: 225 KYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGD 284

Query: 338 KEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIF 397
                 + L ++Y P +FKL P L  +LGI   TRP II A+W Y+K  KLQ+P++    
Sbjct: 285 VNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFV 344

Query: 398 HCDPPLQKVFGEDRLKFT------------------------------------------ 457
            CD  LQ++F   R+KF+                                          
Sbjct: 345 ICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVD 404

Query: 458 ----MELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFIDALIE 470
                ++++ L +    +EI   D  I   I  I++ + +R F L F++ P  FI+  ++
Sbjct: 405 DTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQ 464

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BLAST of Tan0004036 vs. ExPASy Swiss-Prot
Match: Q61466 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus OX=10090 GN=Smarcd1 PE=1 SV=3)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-51
Identity = 141/462 (30.52%), Postives = 216/462 (46.75%), Query Frame = 0


Query: 98  GGGNMGSPLQG--FSTPG-LAGAKRISQKPPVRP------PILSPATTFSPLKTMELTPA 157
           G G   SP+ G  +  PG L G++   Q P + P      P + P    S +      PA
Sbjct: 45  GQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPA 104

Query: 158 ARK----------------KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARK 217
            ++                KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK
Sbjct: 105 PQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRK 164

Query: 218 KVDIHEALKNP-------------PFNTVPKKPNADP-----PTWTLKIIGRILEDGIDP 277
           ++DI EALK P              FN  P K +A+       +W L++ GR+LED    
Sbjct: 165 RLDIQEALKRPIKQKRKLRIFISNTFN--PAKSDAEDGEGTVASWELRVEGRLLEDAALS 224

Query: 278 DHPGVVQRSNPLYPKFSSFFKRVTISLDQRLY-PDSHIIAWENARSPAPHEGFEVKRKGD 337
            +    Q+      KFSSFFK + I LD+ LY PD+H++ W    +    +GF+VKR GD
Sbjct: 225 KYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGD 284

Query: 338 KEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIF 397
                 + L ++Y P +FKL P L  +LGI   TRP II A+W Y+K  KLQ+P++    
Sbjct: 285 VNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFV 344

Query: 398 HCDPPLQKVFGEDRLKFT------------------------------------------ 457
            CD  LQ++F   R+KF+                                          
Sbjct: 345 LCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVD 404

Query: 458 ----MELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFIDALIE 470
                ++++ L +    +EI   D  I   I  I++ + +R F L F++ P  FI+  ++
Sbjct: 405 DTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQ 464

[Close]

BLAST of Tan0004036 vs. ExPASy Swiss-Prot
Match: Q2TBN1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 7.7e-51
Identity = 141/462 (30.52%), Postives = 218/462 (47.19%), Query Frame = 0


Query: 98  GGGNMGSPLQG--FSTPG-LAGAKRISQKPPVRP------PILSPATTFSPLKTMELTPA 157
           G G   SP+ G  +  PG L G++   Q P + P      P + P    S +      PA
Sbjct: 45  GQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSLKRPA 104

Query: 158 ARK----------------KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARK 217
            ++                KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK
Sbjct: 105 PQQIKQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRK 164

Query: 218 KVDIHEALKNP-------------PFNTVPKKPNADP-----PTWTLKIIGRILEDGIDP 277
           ++DI EALK P              FN  P K +A+       +W L++ GR+LED    
Sbjct: 165 RLDIQEALKRPIKQKRKLRIFISNTFN--PAKSDAEDGEGTVASWELRVEGRLLEDSALS 224

Query: 278 DHPGVVQRSNPLYPKFSSFFKRVTISLDQRLY-PDSHIIAWENARSPAPHEGFEVKRKGD 337
            +    Q+      KFSSFFK + I LD+ LY PD+H++ W    +    +GF+VKR GD
Sbjct: 225 KYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGD 284

Query: 338 KEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIF 397
                 + L ++Y P +FKL P L  +LGI   TRP II A+W Y+K  KLQ+P++    
Sbjct: 285 VNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFV 344

Query: 398 HCDPPLQKVFGEDRLKFT------------------------------------------ 457
            CD  LQ++F   R+KF+                                          
Sbjct: 345 ICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVD 404

Query: 458 ----MELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFIDALIE 470
                ++++ L +    +EI   D  I   I  I++ + +R F L F++ P  FI+  ++
Sbjct: 405 DTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQ 464

[Close]

BLAST of Tan0004036 vs. NCBI nr
Match: XP_022156506.1 (SWI/SNF complex component SNF12 homolog [Momordica charantia])

HSP 1 Score: 865.1 bits (2234), Expect = 2.7e-247
Identity = 461/546 (84.43%), Postives = 467/546 (85.53%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFS-PQAQSHLGAGFQTPFQLTPAQA 60
           MSMNNNNPPKSLG ASSSPFGNSGIVPPSMAANSTFS PQAQ  LGAGFQTPFQL+PAQA
Sbjct: 1   MSMNNNNPPKSLGAASSSPFGNSGIVPPSMAANSTFSQPQAQPQLGAGFQTPFQLSPAQA 60

Query: 61  LAQAQLKA--HAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGA 120
            AQAQLKA  HAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSP  GFSTPGLAG 
Sbjct: 61  FAQAQLKAQVHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPSPGFSTPGLAGV 120

Query: 121 KRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
           KRI QKPPVRPPILSP+TTFSPLKTME+TPAARKKKQKLPEKQLQDKVAAILPESALYTQ
Sbjct: 121 KRIPQKPPVRPPILSPSTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180

Query: 181 LLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWT 240
           LLEFESRVDAALARKKVDIHEALKNPP                  NT+PKKPNADPPTWT
Sbjct: 181 LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWT 240

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDGIDPDHP VVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII WENARSP
Sbjct: 241 LKIIGRILEDGIDPDHPSVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP 300

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK
Sbjct: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPS FHCDPPLQKVFGED+LKFTM                            
Sbjct: 361 ARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP 420

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             ELSALLANAEKNKEID+CDEAIC AIRKIHEHRRRRAFFLGF
Sbjct: 421 AGTACYDVLVDVPFPIHRELSALLANAEKNKEIDSCDEAICTAIRKIHEHRRRRAFFLGF 480

[Close]

BLAST of Tan0004036 vs. NCBI nr
Match: KAG7022667.1 (SWI/SNF complex component SNF12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852.0 bits (2200), Expect = 2.4e-243
Identity = 449/543 (82.69%), Postives = 464/543 (85.45%), Query Frame = 0


Query: 2   SMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTF-SPQAQSHLGAGFQTPFQLTPAQAL 61
           +MNNNNPPKSLGG SSSPFGNSGI+PPSMAANS+F  PQAQS LGAGFQTPFQLTPAQAL
Sbjct: 5   NMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPAQAL 64

Query: 62  AQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGAKRI 121
           AQAQLKAHAQAQAQAAHAQFQA LQAQGLSLTQSQ +GGGNMGSPLQGFSTPGLAG KRI
Sbjct: 65  AQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNMGSPLQGFSTPGLAGVKRI 124

Query: 122 SQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLE 181
            QKPPVRPPILSPAT FSPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALYTQLLE
Sbjct: 125 PQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALYTQLLE 184

Query: 182 FESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWTLKI 241
           FESRVDAALARKKVDIHEALKNPP                  NT+P+KPNADPPTWTLKI
Sbjct: 185 FESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTWTLKI 244

Query: 242 IGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSPAPH 301
           IGRILEDGIDPDHPGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHII WENARSPAP+
Sbjct: 245 IGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARSPAPN 304

Query: 302 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 361
           EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK
Sbjct: 305 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 364

Query: 362 LQNPNDPSIFHCDPPLQKVFGEDRLKFTM------------------------------- 421
           LQNPNDPSIFHCD PLQKVFGED++KFTM                               
Sbjct: 365 LQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSPVGT 424

Query: 422 ---------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQS 481
                          ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLGFSQS
Sbjct: 425 ACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQS 484

[Close]

BLAST of Tan0004036 vs. NCBI nr
Match: XP_022989619.1 (SWI/SNF complex component SNF12 homolog [Cucurbita maxima] >XP_022989620.1 SWI/SNF complex component SNF12 homolog [Cucurbita maxima])

HSP 1 Score: 852.0 bits (2200), Expect = 2.4e-243
Identity = 452/546 (82.78%), Postives = 465/546 (85.16%), Query Frame = 0


Query: 1   MSMN--NNNPPKSLGGASSSPFGNSGIVPPSMAANSTF-SPQAQSHLGAGFQTPFQLTPA 60
           MSMN  NNNPPKSLGG SSSPFGNSGI+PPSMAANS+F  PQAQS LGAGFQTPFQLTPA
Sbjct: 6   MSMNNINNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPA 65

Query: 61  QALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGA 120
           QALAQAQLKAHAQAQAQAAHAQFQA LQAQGLSLTQSQ +GGGNMGSPLQGFSTPGLAG 
Sbjct: 66  QALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQAIGGGNMGSPLQGFSTPGLAGV 125

Query: 121 KRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
           KRI QKPPVRPPILSPAT FSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ
Sbjct: 126 KRIPQKPPVRPPILSPATPFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 185

Query: 181 LLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWT 240
           LLEFESRVDAALARKKVDIHEALKNPP                  NT+P+KPNADPPTWT
Sbjct: 186 LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTWT 245

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDGIDPDHPGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHII WENARSP
Sbjct: 246 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARSP 305

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           AP+EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK
Sbjct: 306 APNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 365

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPSIFHCD PLQKVFGED++KFTM                            
Sbjct: 366 ARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP 425

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLGF
Sbjct: 426 VGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGF 485

[Close]

BLAST of Tan0004036 vs. NCBI nr
Match: KAG6588902.1 (SWI/SNF complex component SNF12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 852.0 bits (2200), Expect = 2.4e-243
Identity = 449/543 (82.69%), Postives = 464/543 (85.45%), Query Frame = 0


Query: 2   SMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTF-SPQAQSHLGAGFQTPFQLTPAQAL 61
           +MNNNNPPKSLGG SSSPFGNSGI+PPSMAANS+F  PQAQS LGAGFQTPFQLTPAQAL
Sbjct: 164 NMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPAQAL 223

Query: 62  AQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGAKRI 121
           AQAQLKAHAQAQAQAAHAQFQA LQAQGLSLTQSQ +GGGNMGSPLQGFSTPGLAG KRI
Sbjct: 224 AQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNMGSPLQGFSTPGLAGVKRI 283

Query: 122 SQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLE 181
            QKPPVRPPILSPAT FSPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALYTQLLE
Sbjct: 284 PQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALYTQLLE 343

Query: 182 FESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWTLKI 241
           FESRVDAALARKKVDIHEALKNPP                  NT+P+KPNADPPTWTLKI
Sbjct: 344 FESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTWTLKI 403

Query: 242 IGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSPAPH 301
           IGRILEDGIDPDHPGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHII WENARSPAP+
Sbjct: 404 IGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARSPAPN 463

Query: 302 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 361
           EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK
Sbjct: 464 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 523

Query: 362 LQNPNDPSIFHCDPPLQKVFGEDRLKFTM------------------------------- 421
           LQNPNDPSIFHCD PLQKVFGED++KFTM                               
Sbjct: 524 LQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSPVGT 583

Query: 422 ---------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQS 481
                          ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLGFSQS
Sbjct: 584 ACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQS 643

[Close]

BLAST of Tan0004036 vs. NCBI nr
Match: XP_038895835.1 (SWI/SNF complex component SNF12 homolog [Benincasa hispida] >XP_038895836.1 SWI/SNF complex component SNF12 homolog [Benincasa hispida])

HSP 1 Score: 851.3 bits (2198), Expect = 4.1e-243
Identity = 457/547 (83.55%), Postives = 463/547 (84.64%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANST-FS-PQAQSHLGAGFQTPFQLTPAQ 60
           MS+NNNNPPKSLGGASSSPFGNSG+VPPSMAANST FS PQAQ+ LGAGFQ PF L  AQ
Sbjct: 1   MSINNNNPPKSLGGASSSPFGNSGMVPPSMAANSTSFSQPQAQAQLGAGFQNPFPLCTAQ 60

Query: 61  ALAQAQLK--AHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAG 120
            LAQAQLK  AHAQAQAQAAHAQFQAQLQAQGLSLTQSQ VGGGNMGSP  GFSTPGLAG
Sbjct: 61  VLAQAQLKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNMGSPSPGFSTPGLAG 120

Query: 121 AKRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 180
            KRI QKPPVRPPILSP TTFSPLKTME+TPAARKKKQKLPEKQLQDKVAAILPESALYT
Sbjct: 121 VKRIPQKPPVRPPILSPGTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALYT 180

Query: 181 QLLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTW 240
           QLLEFESRVDAALARKKVDIHEALKNPP                  NTVPKKPNADPPTW
Sbjct: 181 QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTVPKKPNADPPTW 240

Query: 241 TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARS 300
           TLKIIGRILEDGIDPDHPG+VQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII WENARS
Sbjct: 241 TLKIIGRILEDGIDPDHPGLVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS 300

Query: 301 PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 360
           PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV
Sbjct: 301 PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 360

Query: 361 KARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM--------------------------- 420
           KARKLQNPNDPS FHCDPPLQKVFGED+LKFTM                           
Sbjct: 361 KARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNS 420

Query: 421 -------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLG 480
                              ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLG
Sbjct: 421 PVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG 480

[Close]

BLAST of Tan0004036 vs. ExPASy TrEMBL
Match: A0A6J1DV59 (SWI/SNF complex component SNF12 homolog OS=Momordica charantia OX=3673 GN=LOC111023389 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.3e-247
Identity = 461/546 (84.43%), Postives = 467/546 (85.53%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFS-PQAQSHLGAGFQTPFQLTPAQA 60
           MSMNNNNPPKSLG ASSSPFGNSGIVPPSMAANSTFS PQAQ  LGAGFQTPFQL+PAQA
Sbjct: 1   MSMNNNNPPKSLGAASSSPFGNSGIVPPSMAANSTFSQPQAQPQLGAGFQTPFQLSPAQA 60

Query: 61  LAQAQLKA--HAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGA 120
            AQAQLKA  HAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSP  GFSTPGLAG 
Sbjct: 61  FAQAQLKAQVHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPSPGFSTPGLAGV 120

Query: 121 KRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
           KRI QKPPVRPPILSP+TTFSPLKTME+TPAARKKKQKLPEKQLQDKVAAILPESALYTQ
Sbjct: 121 KRIPQKPPVRPPILSPSTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180

Query: 181 LLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWT 240
           LLEFESRVDAALARKKVDIHEALKNPP                  NT+PKKPNADPPTWT
Sbjct: 181 LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWT 240

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDGIDPDHP VVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII WENARSP
Sbjct: 241 LKIIGRILEDGIDPDHPSVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP 300

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK
Sbjct: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPS FHCDPPLQKVFGED+LKFTM                            
Sbjct: 361 ARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP 420

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             ELSALLANAEKNKEID+CDEAIC AIRKIHEHRRRRAFFLGF
Sbjct: 421 AGTACYDVLVDVPFPIHRELSALLANAEKNKEIDSCDEAICTAIRKIHEHRRRRAFFLGF 480

[Close]

BLAST of Tan0004036 vs. ExPASy TrEMBL
Match: A0A6J1JMV8 (SWI/SNF complex component SNF12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111486650 PE=4 SV=1)

HSP 1 Score: 852.0 bits (2200), Expect = 1.2e-243
Identity = 452/546 (82.78%), Postives = 465/546 (85.16%), Query Frame = 0


Query: 1   MSMN--NNNPPKSLGGASSSPFGNSGIVPPSMAANSTF-SPQAQSHLGAGFQTPFQLTPA 60
           MSMN  NNNPPKSLGG SSSPFGNSGI+PPSMAANS+F  PQAQS LGAGFQTPFQLTPA
Sbjct: 6   MSMNNINNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPA 65

Query: 61  QALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGA 120
           QALAQAQLKAHAQAQAQAAHAQFQA LQAQGLSLTQSQ +GGGNMGSPLQGFSTPGLAG 
Sbjct: 66  QALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQAIGGGNMGSPLQGFSTPGLAGV 125

Query: 121 KRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
           KRI QKPPVRPPILSPAT FSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ
Sbjct: 126 KRIPQKPPVRPPILSPATPFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 185

Query: 181 LLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWT 240
           LLEFESRVDAALARKKVDIHEALKNPP                  NT+P+KPNADPPTWT
Sbjct: 186 LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTWT 245

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDGIDPDHPGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHII WENARSP
Sbjct: 246 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARSP 305

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           AP+EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK
Sbjct: 306 APNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 365

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPSIFHCD PLQKVFGED++KFTM                            
Sbjct: 366 ARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP 425

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLGF
Sbjct: 426 VGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGF 485

[Close]

BLAST of Tan0004036 vs. ExPASy TrEMBL
Match: A0A0A0LB48 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585900 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 4.4e-243
Identity = 456/547 (83.36%), Postives = 462/547 (84.46%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANST-FS-PQAQSHLGAGFQTPFQLTPAQ 60
           MSMNNNNPPK+LGGASSSPFGNSG+VPPSMAANST FS PQ Q+ LGAGFQ PF LT AQ
Sbjct: 1   MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTAQ 60

Query: 61  ALAQAQLK--AHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAG 120
            LAQAQ K  AHAQAQAQAAHAQFQAQLQAQGLSLTQSQ VGGGN+GSP  GFSTPGLAG
Sbjct: 61  VLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAG 120

Query: 121 AKRISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 180
            KRI QKPPVRPPILSP TTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT
Sbjct: 121 VKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 180

Query: 181 QLLEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTW 240
           QLLEFESRVDAALARKKVDIHEALKNPP                  NT+PKKPNADPPTW
Sbjct: 181 QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTW 240

Query: 241 TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARS 300
           TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII WENARS
Sbjct: 241 TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS 300

Query: 301 PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 360
           PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV
Sbjct: 301 PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 360

Query: 361 KARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM--------------------------- 420
           KARKLQNPNDPS FHCDPPLQKVFGED+LKFTM                           
Sbjct: 361 KARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNS 420

Query: 421 -------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLG 480
                              ELSALLANAEKNKEIDACDEAIC AIRKIHEHRRRRAFFLG
Sbjct: 421 PAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG 480

[Close]

BLAST of Tan0004036 vs. ExPASy TrEMBL
Match: A0A6J1ENL0 (SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111435165 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 4.4e-243
Identity = 448/543 (82.50%), Postives = 464/543 (85.45%), Query Frame = 0


Query: 2   SMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTF-SPQAQSHLGAGFQTPFQLTPAQAL 61
           +MNNNNPPKSLGG SSSPFGNSGI+PPSMAANS+F  PQAQS LGAGFQTPFQLTPAQAL
Sbjct: 5   NMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPAQAL 64

Query: 62  AQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGAKRI 121
           AQAQLKAHAQAQAQAAHAQFQA LQAQGLSLTQSQ +GGGNMGSPLQGFSTPGLAG KRI
Sbjct: 65  AQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNMGSPLQGFSTPGLAGVKRI 124

Query: 122 SQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLE 181
            QKPPVRPPILSPAT FSPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALYTQLLE
Sbjct: 125 PQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALYTQLLE 184

Query: 182 FESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWTLKI 241
           FESRVDAALARKKVDIHEALKNPP                  NT+P+KPNADPPTWTLKI
Sbjct: 185 FESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTSANQVNTIPRKPNADPPTWTLKI 244

Query: 242 IGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSPAPH 301
           IGRILEDGIDPDHPGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHII WENARSPAP+
Sbjct: 245 IGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARSPAPN 304

Query: 302 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 361
           EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK
Sbjct: 305 EGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARK 364

Query: 362 LQNPNDPSIFHCDPPLQKVFGEDRLKFTM------------------------------- 421
           LQNPNDPSIFHCD PLQKVFGED++KFTM                               
Sbjct: 365 LQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSPVGT 424

Query: 422 ---------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQS 481
                          ELSALLANAEKNKEI+ACDEAIC AIRKIHEHRRRRAFFLGFSQS
Sbjct: 425 ACYDVLVDVPFPIHRELSALLANAEKNKEINACDEAICTAIRKIHEHRRRRAFFLGFSQS 484

[Close]

BLAST of Tan0004036 vs. ExPASy TrEMBL
Match: A0A6J1F9A1 (SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441979 PE=4 SV=1)

HSP 1 Score: 849.7 bits (2194), Expect = 5.8e-243
Identity = 452/545 (82.94%), Postives = 459/545 (84.22%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFSPQAQSHLGAGFQTPFQLTPAQAL 60
           MSMNNNNPPKSLGG SSSP+GNSGIVPPSMAAN+TFS Q Q+ LGAGFQ PFQL+PAQ L
Sbjct: 1   MSMNNNNPPKSLGGTSSSPYGNSGIVPPSMAANATFS-QPQAQLGAGFQNPFQLSPAQVL 60

Query: 61  AQAQLK--AHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNMGSPLQGFSTPGLAGAK 120
           AQA LK  AHAQAQAQA HAQFQAQLQAQGLSL+QSQ VGGGNMGSP  GFSTPGLAGAK
Sbjct: 61  AQATLKAHAHAQAQAQAVHAQFQAQLQAQGLSLSQSQNVGGGNMGSPSPGFSTPGLAGAK 120

Query: 121 RISQKPPVRPPILSPATTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQL 180
           RI QKPPVRPPILSP TTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQL
Sbjct: 121 RIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQL 180

Query: 181 LEFESRVDAALARKKVDIHEALKNPP-----------------FNTVPKKPNADPPTWTL 240
           LEFESRVDAALARKKVDIHEALKNPP                  NT+PKKPNADPPTWTL
Sbjct: 181 LEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTL 240

Query: 241 KIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSPA 300
           KIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII WENARSPA
Sbjct: 241 KIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPA 300

Query: 301 PHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKA 360
           PHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKA
Sbjct: 301 PHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKA 360

Query: 361 RKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM----------------------------- 420
           RKLQNPNDPS FHCDPPLQKVFGED+LKFTM                             
Sbjct: 361 RKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSPA 420

Query: 421 -----------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGFS 480
                            ELSALLANAEKNKEID CDEAIC AIRKIHEHRRRRAFFLGFS
Sbjct: 421 GTACYDVLVDVPFPIHRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGFS 480

[Close]

BLAST of Tan0004036 vs. TAIR 10
Match: AT5G14170.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 645.6 bits (1664), Expect = 3.2e-185
Identity = 355/545 (65.14%), Postives = 405/545 (74.31%), Query Frame = 0


Query: 1   MSMNNNNPPKSLGGASSSPFGNSGIVPPSMAANSTFSPQAQSHLGAGFQTPFQLTPAQAL 60
           MS NNNNP K  G A   PFGN G+   S+  N  F   AQSH+ A FQ  FQ + AQAL
Sbjct: 1   MSGNNNNPQKPQGSA-PLPFGNPGMASASVPGNQGF---AQSHMAANFQAQFQFSQAQAL 60

Query: 61  AQAQLKAHAQAQAQAAHAQFQAQLQAQGLSLTQSQ-TVGGGNMGSPLQGFSTPGLAGAKR 120
                 AHAQAQ++   AQ QAQLQAQG+++ Q+Q + G G +G      +TPG    KR
Sbjct: 61  ------AHAQAQSK-VQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSSPSLTTPGSLNMKR 120

Query: 121 ISQKPPVRPPILSPAT--TFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
             QKPP+RPP  +PA+  T SP++TMELTPAARKKKQKLPEK LQ++VAAILPESALYTQ
Sbjct: 121 FQQKPPMRPP-GAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQ 180

Query: 181 LLEFESRVDAALARKKVDIHEALKNPPF-----------------NTVPKKPNADPPTWT 240
           LLEFESRVDAAL RKKVDI EALKNPP                  NT+P  PNADPPTWT
Sbjct: 181 LLEFESRVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWT 240

Query: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIAWENARSP 300
           LKIIGRILEDG+DPD PG VQ++NPL+PKFSSFFKRVT+SLDQRLYP++ +I WENARSP
Sbjct: 241 LKIIGRILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSP 300

Query: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360
           AP EGFE+KRKG++EF+ +IRLEMNY+PEKFKLS ALM+VLGIEV+TRPRIIAAIWHYVK
Sbjct: 301 APQEGFEIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVK 360

Query: 361 ARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM---------------------------- 420
           ARKLQNPNDPS F+CD  LQKVFGE++LKFTM                            
Sbjct: 361 ARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNP 420

Query: 421 ------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRRRRAFFLGF 480
                             +L+ LLANAEKNKEI+ACDEAICAAIRKIHEHRRRRAFFLGF
Sbjct: 421 AVSACYDVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGF 480

[Close]

BLAST of Tan0004036 vs. TAIR 10
Match: AT3G01890.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 492.7 bits (1267), Expect = 3.5e-139
Identity = 268/427 (62.76%), Postives = 304/427 (71.19%), Query Frame = 0


Query: 107 QGFSTPGLAGAKRISQKPPV-RPPILSPATTFSPLKTMELTPAARKKKQKLPEK-QLQDK 166
           QG S PG    +R   KPP+  PP + P        +MELTPA+RKKK KLP+K  LQ++
Sbjct: 48  QGISAPG----RRFPHKPPIGGPPAVPP--------SMELTPASRKKKHKLPDKSSLQER 107

Query: 167 VAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPP----------FNTVPKK-PN 226
           VAA+LPESALYTQLLEFESRVDAAL RKKVDI ++LKNPP          FNT   + P 
Sbjct: 108 VAAVLPESALYTQLLEFESRVDAALFRKKVDIQDSLKNPPSIQKTLRIYVFNTFSNQIPG 167

Query: 227 ADPPTWTLKIIGRILEDGIDPDHP-GVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHII 286
            DPPTWTL+I GR+L    DPDH  G+VQ SNPLYPKFSSFFK + ISLDQ LYP++H+I
Sbjct: 168 PDPPTWTLRIFGRVL----DPDHTGGLVQNSNPLYPKFSSFFKTLKISLDQSLYPENHLI 227

Query: 287 AWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRII 346
            W+  RSPAP EGFE+KR G +EF+  I LEMNY+PEKFK SPALM+VLGIEVDTRPRII
Sbjct: 228 EWKRDRSPAPLEGFEIKRIGCQEFAATILLEMNYVPEKFKTSPALMQVLGIEVDTRPRII 287

Query: 347 AAIWHYVKARKLQNPNDPSIFHCDPPLQKVFGEDRLKFTM-------------------- 406
           AAIWHYVK RKLQNPNDPS F+CD  L  VFGE+++KFTM                    
Sbjct: 288 AAIWHYVKVRKLQNPNDPSFFNCDAALHSVFGEEKMKFTMLSHKISQHLSPPPPIQLVHK 347

Query: 407 --------------------------ELSALLANAEKNKEIDACDEAICAAIRKIHEHRR 466
                                     ELS LLAN EKNKEI+ACDEAIC AIRKIHEHRR
Sbjct: 348 IKLSGNNPAISACYDVLVDIPAPVQTELSNLLANPEKNKEIEACDEAICGAIRKIHEHRR 407

Query: 467 RRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYI 474
           RRAFFLGFSQSPVEF +AL+ESQ+KDLKL+AGEASRNAEKE RS+FFNQPWVEDA IRY+
Sbjct: 408 RRAFFLGFSQSPVEFTNALMESQTKDLKLVAGEASRNAEKEGRSEFFNQPWVEDAAIRYL 458

[Close]

BLAST of Tan0004036 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-06
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 313 LSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIFHCDPPLQKVF-GEDRLKFT 372
           +SP L + LG    +R   I  IW Y+K+  LQNP D     CD  L+ +F G+D++ F 
Sbjct: 70  VSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGF- 129

Query: 373 MELSALLA 380
           +E+S LL+
Sbjct: 130 LEISKLLS 136

[Close]

BLAST of Tan0004036 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.5e-04
Identity = 22/67 (32.84%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 313 LSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIFHCDPPLQKVF-GEDRLKFT 372
           +S A+ +V+G+    R + +  IW Y+K   LQ+P +     CD  L+K+F G++R+ F 
Sbjct: 74  VSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGF- 133

Query: 373 MELSALL 379
           +E++ L+
Sbjct: 134 LEIAKLI 139

[Close]

BLAST of Tan0004036 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.2e-04
Identity = 21/67 (31.34%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 313 LSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSIFHCDPPLQKVF-GEDRLKFT 372
           +SP + +++ +    R + +  IW Y+K   LQ+P +     CD  L+K+F G DR+ F 
Sbjct: 71  VSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGF- 130

Query: 373 MELSALL 379
           +E++ L+
Sbjct: 131 LEIAKLI 136

The following BLAST results are available for this feature:

BLAST of Tan0004036 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMT4	4.5e-184	65.14	SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g1...	[more]
Q9VYG2	2.2e-53	34.20	Brahma-associated protein of 60 kDa OS=Drosophila melanogaster OX=7227 GN=Bap60 ...	[more]
Q96GM5	4.5e-51	30.52	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q61466	4.5e-51	30.52	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q2TBN1	7.7e-51	30.52	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of Tan0004036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156506.1	2.7e-247	84.43	SWI/SNF complex component SNF12 homolog [Momordica charantia]	[more]
KAG7022667.1	2.4e-243	82.69	SWI/SNF complex component SNF12-like protein [Cucurbita argyrosperma subsp. argy...	[more]
XP_022989619.1	2.4e-243	82.78	SWI/SNF complex component SNF12 homolog [Cucurbita maxima] >XP_022989620.1 SWI/S...	[more]
KAG6588902.1	2.4e-243	82.69	SWI/SNF complex component SNF12-like protein, partial [Cucurbita argyrosperma su...	[more]
XP_038895835.1	4.1e-243	83.55	SWI/SNF complex component SNF12 homolog [Benincasa hispida] >XP_038895836.1 SWI/...	[more]

BLAST of Tan0004036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DV59	1.3e-247	84.43	SWI/SNF complex component SNF12 homolog OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1JMV8	1.2e-243	82.78	SWI/SNF complex component SNF12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A0A0LB48	4.4e-243	83.36	SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585900 PE=4 S...	[more]
A0A6J1ENL0	4.4e-243	82.50	SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1F9A1	5.8e-243	82.94	SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Tan0004036 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14170.1	3.2e-185	65.14	SWIB/MDM2 domain superfamily protein	[more]
AT3G01890.1	3.5e-139	62.76	SWIB/MDM2 domain superfamily protein	[more]
AT3G03590.1	3.5e-06	39.71	SWIB/MDM2 domain superfamily protein	[more]
AT4G34290.1	1.5e-04	32.84	SWIB/MDM2 domain superfamily protein	[more]
AT2G14880.1	3.2e-04	31.34	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 307..383 e-value: 4.3E-13 score: 59.5
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 303..387 e-value: 5.9E-22 score: 79.5
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 301..372
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 310..371 e-value: 8.4E-21 score: 73.6
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 306..384 score: 20.979548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 95..372
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 373..472
None	No IPR available	PANTHER	PTHR13844:SF58	SWIB/MDM2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 373..472
None	No IPR available	PANTHER	PTHR13844:SF58	SWIB/MDM2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 95..372
None	No IPR available	CDD	cd10568	SWIB_like	coord: 313..378 e-value: 1.72126E-26 score: 99.9148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004036.1	Tan0004036.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016514	SWI/SNF complex