Tan0003938 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACAATCGATCTGCCACAAAATTAGGACGAAACACGAAATGAACAGCAATCTTCAAACAGAAATCAATGAAATTCATGTAAAAAGAAAAAACCAATTCCAAATCCAATCCATCCATGCAGTTCCCCCCAAAATCCAGCTAAAACCAAGAAATTCCCATTCCATCTCCACCACCAATCCAATCTCATCATCATGTTAAGCCTTAAGCAGACATCGATAATGGCCGCCACTTTCCATGTCCACAACCCTTTCTTCTTCAACTCCTCCTCCTCCTCTCCCCACAGAACCCTCCCCTTTTGGTTGCGCTCCGTTTCCGCCACCGCCGCCCGCCGCAATTCCCCCGGACCACCCCAACCGCCGCCGCCGGTTTCGCCGGGAGGCGGTGAGAGAGATTCAGTGATTTATGGAGGTGGAATTGGACGGTGGACGTTAGCACCACGCGCTCGCCTCGTGTACGATAAGGGCCCTCCTAAAATTTTAGGGTTTCGTAGCGGATATAAATGTTTTTCGATGGGGTCTAAAAGGTCCAATTCCATTTCGTCCGATAAAAGAGGAGGGGTTTTTGGGTCAGGGTCAGCTTCTGCTTCTGATTCTGCTTCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGGTTCAGAGAGCAAGGACCATAACAATGGCTGGTACCAAGACGACTTGCACAGCCAATCGCCATTGATGCACCAACACGAACCACAACGTTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCCCGAGTGGCCGCTGTCCCGATTTTTGTTTGCAGTATGTTCCTTTGTTTTTCGCAATTATGTTTCTTTTTTATCATCCCATTGAATTGAATTGATGCGCGATCAATGGTAGATCTCTAAATGTCGTGTGTTGTGACGTACATTTTGGCCTGACATTGCTCCGATCGTTATTCTCATTGGATTTGTATTGGAAATTGATGTGATCAATTCCTGTATGTGGCTCGTGCTAACGATTGTTACCTTGTCTTGGAAGATAAGTTATTGTCATTTTATGTTTTATTTTGTGTGAAAGAGAGATTGAAAATGGATTAGTTTCACTCTGCTTAACGAACGTAGGTAATATGTGCATTAGTTCTTTTCTCATTGGGTAAACTGCTGTTCTGCGACTGCTTATGCACTAAAAACTTGCAACAGACAGTTCTATAGCTTGTTGTTATGCAAAATCTTCTTTCATCGTTACTTTGTTCTGTTGTTTAAGTCTGCAAATGTTATACCAGTTTATTATTATTGTGGATTTGAAGCATTTATGATGGCAATATGTGATTAAGATTAGACTGTTGTCAGCTGCCTATCACGAATGCCTGACTTTGTTTTCTAATTGTCTCTGGAAACTACTGTCTGCTTTTGATTCTAATGTATTTGGCTGTGAAAAACAGTCTAGTGCAGTTGGTTTTGATAATTATAAAAAAAAAACACATGTTTCTGCTATTACCTTCTATGTTGATGATTGGTTTGTTCATCTCAAACCGCTTTCCTCTTGTTTTTAGAAATCAAAGTAAAAGTTAATTTTAGTGCACTTGAATTTAATCATAAAAATATTTGTTTCTGTTATTAGCCTTCTATGTTGATAATTGGTGGGGAACAACTGCGACAACTAGTATATTCATTGCTGCAGCAGTTACAGACTGGCTCGATGGTTATATTGCTCGGAAGGTATGTTATTCACATGCTTGAAGTTCATATCTTGTATGGTGGAGAAAACCTGTATTGGCTATTCTTTTTATAGCTATCTCAATCAGTCTGGTCCTGATATTTACATGCATTTATCAGATGAGGTTAGGTTCTGCTTTTGGTGCGTTTCTTGATCCAGTAGCTGATAAGGTTGGCCATTCTTCTTTGACGATCCAACTCATCTTTTGATCCAGTTGAAGGAAATTGAATCAATCTTGTTAACTTCAGATATGGTTCAAATATTCTTAATCAACTAACATTCCTTTACTACAGCTTATGGTTGCTGCCACACTGATTTTACTATGTACACAACCTTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATTGCAATTATTGGCAGGGAGGTAATAAATTTTCTGGCCTCGTTGATATTTCTTACATTTTCTTTAATAACCAGGGTATCGTCCCCACTCGTTGCATTTTAATTTTGATCCACGCCCACTAATGCTCGACCTTTTTTTTTTTTTTTGGGGGGGGGCATGTGCTCCTTGATTAGACTCCTTGGAAGCTACTTACCCTCTTCTTTGTATGATATCAACCATTTTGATCAATATTAAGAAAAAATTAGAGTTTTCTCTCCCTACTACTTTCTAGAACATCCTCAACTAATACTTTTAGATTAATGTTTTTGGTTAACCTTCAAATTGTGAATGCCTTCTTTAATTATCCATGCCCCTTATATACATCAGATATGGCACACTTAGATATTGTGCCTGCTTTTTTCCCCTCTCCTCTTTCTTTGTTCTTTCTTTTGTATATTTGATTCATCTATGAATTCATAAATGACATCTTATAGACCGTTTTGCAATTTATTTGTAGATAACCATGTCTGCAGTTAGAGAATGGGCTGCTTCCCAGAATAGCAAGCTTTTAGAGGTTGGTTTTTTCTATATACAAAAAACCAATTCGGTTTGTTAGAATTGATGAAGCTTTTAATTCGAACTTAATATGTTGAGAAACAGGCTGTGGCCGTAAATAACTTGGGGAAGTGGAAAACAGCGACACAGATGATCGCGCTAACCACCCTTCTAGCTAGCCGAGACAGCAGGTTCAGTTTCTCTCTGTTTTTCTGCATCAACCATCTTTTACAGCTTTGACAACTTAAGAAACTAACTTTTATTACGACCTTGGTTTTTAGTCTTGAATTTTTCTTGAATGTATATTACCAAAAACAACGACATTATAGAACAGGCTCTTCTATATCTACAAAGCTAATTGTTTCATTTTCCCCCCTTTTTTGTTAGTCTTGGAGGATCTGGAATTGTAGTAGCAACTGGTGTGGTCTTGTTGTACATATCAGCTTGGCTTGCAGTGTGGTCACTATTTGTTTATTCCCGCAAGATCTCAAAAGTTTTACTTCGCTAGCAAAACCCGACCCAACCTTTCGTGTCACTCCATTTTGCTGGACCACACATACAACAGCTAGTCATCTCATGGCCAAAATTACACTGATTGCTTGATCTGTTGTTGGGTGGTGCCCAAATTTAGAGATTGTTGAAGAAATTTTCTCAAGTGACCTGCAGACTGTGGAGGGTTTCTAAGAAGACAGCAGCCATAGTTACAGACCTGCAGAAGCTGGAAGTTTGGAATGAGGTCTGGATGTAACTATAATTTTACTAACTACTTAAAAAAGAAATTATAAAGTGGCACATTATCTCATGCTCATTGATATTTACATTCAATCTCTTGAGTCTTCTTGTCAATGCTGAGATATACCTGGCATTTTTCAGGGGTGCTGAGTTTTCAAGTTTTGTAGATATTTTTTTTTTCTTTTACATTTTTAGATGAAATTTATTGAAACTACATTGATGTAGTAGAGAACAGGTTGAATTGATATTTAATTTTTTATTTGTTTGGAAGATATGCTATCTAATTGAAAAAGGCTGTTAGAAAA CCACAATCGATCTGCCACAAAATTAGGACGAAACACGAAATGAACAGCAATCTTCAAACAGAAATCAATGAAATTCATGTAAAAAGAAAAAACCAATTCCAAATCCAATCCATCCATGCAGTTCCCCCCAAAATCCAGCTAAAACCAAGAAATTCCCATTCCATCTCCACCACCAATCCAATCTCATCATCATGTTAAGCCTTAAGCAGACATCGATAATGGCCGCCACTTTCCATGTCCACAACCCTTTCTTCTTCAACTCCTCCTCCTCCTCTCCCCACAGAACCCTCCCCTTTTGGTTGCGCTCCGTTTCCGCCACCGCCGCCCGCCGCAATTCCCCCGGACCACCCCAACCGCCGCCGCCGGTTTCGCCGGGAGGCGGTGAGAGAGATTCAGTGATTTATGGAGGTGGAATTGGACGGTGGACGTTAGCACCACGCGCTCGCCTCGTGTACGATAAGGGCCCTCCTAAAATTTTAGGGTTTCGTAGCGGATATAAATGTTTTTCGATGGGGTCTAAAAGGTCCAATTCCATTTCGTCCGATAAAAGAGGAGGGGTTTTTGGGTCAGGGTCAGCTTCTGCTTCTGATTCTGCTTCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGGTTCAGAGAGCAAGGACCATAACAATGGCTGGTACCAAGACGACTTGCACAGCCAATCGCCATTGATGCACCAACACGAACCACAACGTTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCCCGAGTGGCCGCTGTCCCGATTTTTGTTTGCACCTTCTATGTTGATAATTGGTGGGGAACAACTGCGACAACTAGTATATTCATTGCTGCAGCAGTTACAGACTGGCTCGATGGTTATATTGCTCGGAAGATGAGGTTAGGTTCTGCTTTTGGTGCGTTTCTTGATCCAGTAGCTGATAAGCTTATGGTTGCTGCCACACTGATTTTACTATGTACACAACCTTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATTGCAATTATTGGCAGGGAGATAACCATGTCTGCAGTTAGAGAATGGGCTGCTTCCCAGAATAGCAAGCTTTTAGAGGCTGTGGCCGTAAATAACTTGGGGAAGTGGAAAACAGCGACACAGATGATCGCGCTAACCACCCTTCTAGCTAGCCGAGACAGCAGTCTTGGAGGATCTGGAATTGTAGTAGCAACTGGTGTGGTCTTGTTGTACATATCAGCTTGGCTTGCAGTGTGGTCACTATTTGTTTATTCCCGCAAGATCTCAAAAGTTTTACTTCGCTAGCAAAACCCGACCCAACCTTTCGTGTCACTCCATTTTGCTGGACCACACATACAACAGCTAGTCATCTCATGGCCAAAATTACACTGATTGCTTGATCTGTTGTTGGGTGGTGCCCAAATTTAGAGATTGTTGAAGAAATTTTCTCAAGTGACCTGCAGACTGTGGAGGGTTTCTAAGAAGACAGCAGCCATAGTTACAGACCTGCAGAAGCTGGAAGTTTGGAATGAGGTCTGGATGTAACTATAATTTTACTAACTACTTAAAAAAGAAATTATAAAGTGGCACATTATCTCATGCTCATTGATATTTACATTCAATCTCTTGAGTCTTCTTGTCAATGCTGAGATATACCTGGCATTTTTCAGGGGTGCTGAGTTTTCAAGTTTTGTAGATATTTTTTTTTTCTTTTACATTTTTAGATGAAATTTATTGAAACTACATTGATGTAGTAGAGAACAGGTTGAATTGATATTTAATTTTTTATTTGTTTGGAAGATATGCTATCTAATTGAAAAAGGCTGTTAGAAAA ATGTTAAGCCTTAAGCAGACATCGATAATGGCCGCCACTTTCCATGTCCACAACCCTTTCTTCTTCAACTCCTCCTCCTCCTCTCCCCACAGAACCCTCCCCTTTTGGTTGCGCTCCGTTTCCGCCACCGCCGCCCGCCGCAATTCCCCCGGACCACCCCAACCGCCGCCGCCGGTTTCGCCGGGAGGCGGTGAGAGAGATTCAGTGATTTATGGAGGTGGAATTGGACGGTGGACGTTAGCACCACGCGCTCGCCTCGTGTACGATAAGGGCCCTCCTAAAATTTTAGGGTTTCGTAGCGGATATAAATGTTTTTCGATGGGGTCTAAAAGGTCCAATTCCATTTCGTCCGATAAAAGAGGAGGGGTTTTTGGGTCAGGGTCAGCTTCTGCTTCTGATTCTGCTTCTGCTTCTCCTCCATCTGCCGGCTCTGAATTTGTGGCTGATATGGGTTCAGAGAGCAAGGACCATAACAATGGCTGGTACCAAGACGACTTGCACAGCCAATCGCCATTGATGCACCAACACGAACCACAACGTTCCAAATTGCTGACATTGCCCACCATTTTGACGCTTGCCCGAGTGGCCGCTGTCCCGATTTTTGTTTGCACCTTCTATGTTGATAATTGGTGGGGAACAACTGCGACAACTAGTATATTCATTGCTGCAGCAGTTACAGACTGGCTCGATGGTTATATTGCTCGGAAGATGAGGTTAGGTTCTGCTTTTGGTGCGTTTCTTGATCCAGTAGCTGATAAGCTTATGGTTGCTGCCACACTGATTTTACTATGTACACAACCTTTGGAGGTTTCTGTGTTTGGTCATGTTCCTTGGCTTCTGACTCTACCTTCAATTGCAATTATTGGCAGGGAGATAACCATGTCTGCAGTTAGAGAATGGGCTGCTTCCCAGAATAGCAAGCTTTTAGAGGCTGTGGCCGTAAATAACTTGGGGAAGTGGAAAACAGCGACACAGATGATCGCGCTAACCACCCTTCTAGCTAGCCGAGACAGCAGTCTTGGAGGATCTGGAATTGTAGTAGCAACTGGTGTGGTCTTGTTGTACATATCAGCTTGGCTTGCAGTGTGGTCACTATTTGTTTATTCCCGCAAGATCTCAAAAGTTTTACTTCGCTAG MLSLKQTSIMAATFHVHNPFFFNSSSSSPHRTLPFWLRSVSATAARRNSPGPPQPPPPVSPGGGERDSVIYGGGIGRWTLAPRARLVYDKGPPKILGFRSGYKCFSMGSKRSNSISSDKRGGVFGSGSASASDSASASPPSAGSEFVADMGSESKDHNNGWYQDDLHSQSPLMHQHEPQRSKLLTLPTILTLARVAAVPIFVCTFYVDNWWGTTATTSIFIAAAVTDWLDGYIARKMRLGSAFGAFLDPVADKLMVAATLILLCTQPLEVSVFGHVPWLLTLPSIAIIGREITMSAVREWAASQNSKLLEAVAVNNLGKWKTATQMIALTTLLASRDSSLGGSGIVVATGVVLLYISAWLAVWSLFVYSRKISKVLLR Homology
BLAST of Tan0003938 vs. ExPASy Swiss-Prot
Match: O80952 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGPS1 PE=1 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.1e-79 Identity = 170/250 (68.00%), Postives = 196/250 (78.40%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy Swiss-Prot
Match: Q9M2W3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=PGPS2 PE=1 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 6.4e-77 Identity = 154/198 (77.78%), Postives = 172/198 (86.87%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy Swiss-Prot
Match: Q8H8U0 (Cardiolipin synthase (CMP-forming), mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0283600 PE=2 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 7.1e-76 Identity = 146/202 (72.28%), Postives = 172/202 (85.15%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy Swiss-Prot
Match: Q2NTS8 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=pgsA PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.5e-30 Identity = 82/185 (44.32%), Postives = 108/185 (58.38%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy Swiss-Prot
Match: Q6D364 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=pgsA PE=3 SV=3) HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30 Identity = 84/183 (45.90%), Postives = 111/183 (60.66%), Query Frame = 0
BLAST of Tan0003938 vs. NCBI nr
Match: XP_023530061.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178 Identity = 347/381 (91.08%), Postives = 353/381 (92.65%), Query Frame = 0
BLAST of Tan0003938 vs. NCBI nr
Match: KAG6600090.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 633.6 bits (1633), Expect = 1.1e-177 Identity = 348/385 (90.39%), Postives = 354/385 (91.95%), Query Frame = 0
BLAST of Tan0003938 vs. NCBI nr
Match: KAG7030761.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 633.6 bits (1633), Expect = 1.1e-177 Identity = 348/385 (90.39%), Postives = 354/385 (91.95%), Query Frame = 0
BLAST of Tan0003938 vs. NCBI nr
Match: XP_022992768.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Cucurbita maxima]) HSP 1 Score: 630.9 bits (1626), Expect = 6.9e-177 Identity = 346/387 (89.41%), Postives = 355/387 (91.73%), Query Frame = 0
BLAST of Tan0003938 vs. NCBI nr
Match: XP_022942882.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like [Cucurbita moschata]) HSP 1 Score: 629.8 bits (1623), Expect = 1.5e-176 Identity = 346/385 (89.87%), Postives = 354/385 (91.95%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy TrEMBL
Match: A0A6J1K069 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488982 PE=3 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 3.3e-177 Identity = 346/387 (89.41%), Postives = 355/387 (91.73%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy TrEMBL
Match: A0A6J1FRH4 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447779 PE=3 SV=1) HSP 1 Score: 629.8 bits (1623), Expect = 7.4e-177 Identity = 346/385 (89.87%), Postives = 354/385 (91.95%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy TrEMBL
Match: A0A1S3BDL3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 OS=Cucumis melo OX=3656 GN=LOC103488733 PE=3 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 2.3e-170 Identity = 334/384 (86.98%), Postives = 346/384 (90.10%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy TrEMBL
Match: A0A0A0KNN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177040 PE=3 SV=1) HSP 1 Score: 606.7 bits (1563), Expect = 6.7e-170 Identity = 333/384 (86.72%), Postives = 345/384 (89.84%), Query Frame = 0
BLAST of Tan0003938 vs. ExPASy TrEMBL
Match: A0A6J1CDI3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 OS=Momordica charantia OX=3673 GN=LOC111010232 PE=3 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.4e-164 Identity = 325/381 (85.30%), Postives = 335/381 (87.93%), Query Frame = 0
BLAST of Tan0003938 vs. TAIR 10
Match: AT2G39290.1 (phosphatidylglycerolphosphate synthase 1 ) HSP 1 Score: 298.5 bits (763), Expect = 7.5e-81 Identity = 170/250 (68.00%), Postives = 196/250 (78.40%), Query Frame = 0
BLAST of Tan0003938 vs. TAIR 10
Match: AT3G55030.1 (phosphatidylglycerolphosphate synthase 2 ) HSP 1 Score: 289.3 bits (739), Expect = 4.6e-78 Identity = 154/198 (77.78%), Postives = 172/198 (86.87%), Query Frame = 0
BLAST of Tan0003938 vs. TAIR 10
Match: AT4G04870.1 (cardiolipin synthase ) HSP 1 Score: 58.2 bits (139), Expect = 1.7e-08 Identity = 33/123 (26.83%), Postives = 69/123 (56.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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