Tan0003933 (gene) Snake gourd v1

Overview


Name	Tan0003933
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor 1B-like
Location	LG06: 10485883 .. 10486584 (+)
RNA-Seq Expression	Tan0003933
Synteny	Tan0003933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCCCAAAACCCCCCATCTATCAAAATATGTCAGTTGATAATGATCTGTTTGGCTACCAAGAAAATTTCTTGTGGAACAATAACGAGAGTTTTCCCGGGAAATTAGAGAATTCCCACCTCTCATTTGAGTTCAATTACTTGGAAGAGATGTTGCTTGCTGATATGCTTGATACCACAGCCGAAGGGACTTCGTCGTCGGATTCGAGCTCTTGCTCGTCTCCGATGATGCAAGTTAAGGAGGAGTTAGAGGAAGGGAGTTTGAGCGACGTCGTTGTACAAGAAGATCAACCACAGGAGGAAAGGGCGTATAGAGGGGTGCGGAGGAGGCCGTGGGGGAAGTACGCTGCCGAGATAAGGGACTCGACGCGACAAGGGGTGAGGGTTTGGTTGGGAACGTTTGAGAGTGCGGAGGCGGCTGCATTGGCTTATGACCAAGCTGCATTTTGTATGAGAGGGGCGCTAGCTACACTCAATTTTCCGGTGGAGGTTGTCCGAGAGTCGCTCCGAGAGATGAAGTACCGATGGGATGTCGGGTGCTCGCCGGTCTTGGCGCTCAAGCGGCGCCACTCGATACGGAGGAAGAAGATGGCGGAGGTGGAGAAGATGGAGAAGAAGATGAACAAGAAGAAGAAAACTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

mRNA sequence

ATTTTCCCAAAACCCCCCATCTATCAAAATATGTCAGTTGATAATGATCTGTTTGGCTACCAAGAAAATTTCTTGTGGAACAATAACGAGAGTTTTCCCGGGAAATTAGAGAATTCCCACCTCTCATTTGAGTTCAATTACTTGGAAGAGATGTTGCTTGCTGATATGCTTGATACCACAGCCGAAGGGACTTCGTCGTCGGATTCGAGCTCTTGCTCGTCTCCGATGATGCAAGTTAAGGAGGAGTTAGAGGAAGGGAGTTTGAGCGACGTCGTTGTACAAGAAGATCAACCACAGGAGGAAAGGGCGTATAGAGGGGTGCGGAGGAGGCCGTGGGGGAAGTACGCTGCCGAGATAAGGGACTCGACGCGACAAGGGGTGAGGGTTTGGTTGGGAACGTTTGAGAGTGCGGAGGCGGCTGCATTGGCTTATGACCAAGCTGCATTTTGTATGAGAGGGGCGCTAGCTACACTCAATTTTCCGGTGGAGGTTGTCCGAGAGTCGCTCCGAGAGATGAAGTACCGATGGGATGTCGGGTGCTCGCCGGTCTTGGCGCTCAAGCGGCGCCACTCGATACGGAGGAAGAAGATGGCGGAGGTGGAGAAGATGGAGAAGAAGATGAACAAGAAGAAGAAAACTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Coding sequence (CDS)

ATGTCAGTTGATAATGATCTGTTTGGCTACCAAGAAAATTTCTTGTGGAACAATAACGAGAGTTTTCCCGGGAAATTAGAGAATTCCCACCTCTCATTTGAGTTCAATTACTTGGAAGAGATGTTGCTTGCTGATATGCTTGATACCACAGCCGAAGGGACTTCGTCGTCGGATTCGAGCTCTTGCTCGTCTCCGATGATGCAAGTTAAGGAGGAGTTAGAGGAAGGGAGTTTGAGCGACGTCGTTGTACAAGAAGATCAACCACAGGAGGAAAGGGCGTATAGAGGGGTGCGGAGGAGGCCGTGGGGGAAGTACGCTGCCGAGATAAGGGACTCGACGCGACAAGGGGTGAGGGTTTGGTTGGGAACGTTTGAGAGTGCGGAGGCGGCTGCATTGGCTTATGACCAAGCTGCATTTTGTATGAGAGGGGCGCTAGCTACACTCAATTTTCCGGTGGAGGTTGTCCGAGAGTCGCTCCGAGAGATGAAGTACCGATGGGATGTCGGGTGCTCGCCGGTCTTGGCGCTCAAGCGGCGCCACTCGATACGGAGGAAGAAGATGGCGGAGGTGGAGAAGATGGAGAAGAAGATGAACAAGAAGAAGAAAACTGTAGTTGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Protein sequence

MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSSSCSSPMMQVKEELEEGSLSDVVVQEDQPQEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRRHSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS

Homology

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BLAST of Tan0003933 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 0


Query: 31  LSFEFNYLEEMLLADMLDTTAEGTSSSDSSSCSSPMMQVKEELEEGSLSDVVVQEDQPQE 90
           L F  N  ++MLL +++   AEG+S    +S SS    +KEE         V   ++ ++
Sbjct: 16  LPFNVNDTQDMLLYNLV---AEGSSQETVNSSSS--YGIKEE--------EVTSYEEERK 75

Query: 91  ERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNF 150
           ++ YRGVR+RPWGKYAAEIRDSTR GVRVWLGTF++AE AALAYDQAAF MRG++A LNF
Sbjct: 76  DKNYRGVRKRPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNF 135

Query: 151 PVEVVRESLREMKYRWDVGCSPVLALKRRHSIRRKKMAEVEKMEKKMNKKKKTVVVFEDL 210
           PVE+V+ESL EMK R+D  CSPV+ LK+R+S+RRK ++       + N+ +K VVVFEDL
Sbjct: 136 PVEIVKESLNEMKCRFDGNCSPVIELKKRYSMRRKSVS-------RKNRARKDVVVFEDL 184

Query: 211 GVEYLEELL 220
           G EYLEELL
Sbjct: 196 GAEYLEELL 184

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BLAST of Tan0003933 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.1e-39
Identity = 104/211 (49.29%), Postives = 134/211 (63.51%), Query Frame = 0


Query: 12  ENFLWNNNESFPGKLENSH-LSFEFNYLEEMLLADMLDTTAEGTSSSDSSSCSSPMMQVK 71
           E  + ++ +SF     N++ L F  N  EEM L  +++ + + T   DS S   P+  V 
Sbjct: 16  EYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQT-YIDSDSQDLPIKSVS 75

Query: 72  EELEEGSLSDVVVQEDQPQEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAA 131
                             + E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTFESAE A
Sbjct: 76  SR----------------KSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEA 135

Query: 132 ALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRRHSIRRKKMAEV 191
           ALAYDQAAF MRG+ A LNF  E V+ESL E+KY ++ GCSPV+ALKR+HS+RR+   + 
Sbjct: 136 ALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKK 195

Query: 192 EKMEKKMNKKKK--TVVVFEDLGVEYLEELL 220
            K     ++  K   VVVFEDLG +YLEELL
Sbjct: 196 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

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BLAST of Tan0003933 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.9e-38
Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 56  SSDSSSCSSPMMQVKEELEEGSLSDVVVQEDQP-QEERAYRGVRRRPWGKYAAEIRDSTR 115
           S D  S  SP M +KEE++ G +S+   +E     EER+YRGVR+RPWGK+AAEIRDSTR
Sbjct: 47  SDDFFSFESPEMMIKEEIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTR 106

Query: 116 QGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMK-YRWDVGCSPV 175
            G+RVWLGTF+ AE AALAYDQAAF  +G+LATLNFPVEVVRESL++M+      G SPV
Sbjct: 107 NGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPV 166

Query: 176 LALKRRHSIRRK---------------------------KMAEVEKMEKKMNKKKKTVVV 220
           +ALKR+HS+R +                             +     +  + ++  T+VV
Sbjct: 167 MALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVV 226

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BLAST of Tan0003933 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 102/256 (39.84%), Postives = 143/256 (55.86%), Query Frame = 0


Query: 10  YQENFL-------------WNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSS 69
           YQ NFL             W++ ESF  +    H SF+    +  LL+   D   +   +
Sbjct: 3   YQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFD----QSFLLSSPTDNYCDDFFA 62

Query: 70  SDSSSCSSPMMQVKEELEEGSLSDVVVQEDQPQEERAYRGVRRRPWGKYAAEIRDSTRQG 129
            +SS        +KEE +E +++         +EE++YRGVR+RPWGK+AAEIRDSTR+G
Sbjct: 63  FESSI-------IKEEGKEATVA-------AEEEEKSYRGVRKRPWGKFAAEIRDSTRKG 122

Query: 130 VRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMK-YRWDVGCSPVLA 189
           +RVWLGTF++AEAAALAYDQAAF ++G+LA LNFP +VV ESLR+M+    + G SPV+A
Sbjct: 123 IRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIA 182

Query: 190 LKRRHSIRRK---------------------------KMAEVEKMEKKMN-----KKKKT 220
           LKR+HS+R +                             + +    +K +     +   T
Sbjct: 183 LKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTT 240

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BLAST of Tan0003933 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 92  RAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFP 151
           + YRGVRRRPWGKYAAEIRDS R G RVWLGTFE+AE AALAYD+AAF MRGA A LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 152 VEVVRESL 160
            E+V  S+
Sbjct: 117 SEIVNASV 124

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BLAST of Tan0003933 vs. NCBI nr
Match: XP_038899832.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 189/230 (82.17%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 1   MSVDNDLFG-YQENFLWNN--NESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSS 60
           MS+ +DLFG YQE+FLWNN  NESF   +     SF+FNYL+EML  DM    AEGT+SS
Sbjct: 1   MSIVSDLFGNYQESFLWNNNHNESF---ISGEESSFDFNYLKEMLFDDMFVEVAEGTTSS 60

Query: 61  DSSSCSSP-MMQVKEEL-EEGSLS-DVVVQEDQP-QEERAYRGVRRRPWGKYAAEIRDST 120
           DSSSCSSP +MQVKEE+ EEGS S D+VVQEDQ  +EER YRGVRRRPWGKYAAEIRDST
Sbjct: 61  DSSSCSSPVVMQVKEEIEEEGSFSDDIVVQEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPV 180
           RQGVRVWLGTF+SAEAAALAYDQAAFCMRG LATLNFPVEVVRESLREMKYRW+ GCSPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPV 180

Query: 181 LALKRRHSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           LALKRRHSIRRKKMAEVEKMEKKM KKKKTVVVFEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHSIRRKKMAEVEKMEKKMMKKKKTVVVFEDLGVEYLEELLSLTS 227

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BLAST of Tan0003933 vs. NCBI nr
Match: XP_023514563.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 5.6e-86
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+ N LFGYQENF     E+FPGK +NSHLSF FNYLEEML ADM  + +  +SSSDSS
Sbjct: 1   MSLHNHLFGYQENF-----ENFPGK-QNSHLSFHFNYLEEMLFADM--SLSSSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQ-PQEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D+VVQED+ P+EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIVVQEDRTPKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFPVEVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKKMAE EKMEKKM KKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKM-KKKKNVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Tan0003933 vs. NCBI nr
Match: KAG7025485.1 (Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.2 bits (835), Expect = 2.1e-85
Identity = 182/224 (81.25%), Postives = 196/224 (87.50%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+DN LFGYQENF     E+FPGK +NSHLSF FNYLEEML ADM  + +  +SSSDSS
Sbjct: 1   MSLDNHLFGYQENF-----ENFPGK-QNSHLSFHFNYLEEMLFADM--SLSSSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQPQ-EERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D++VQ+ Q Q EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFPVEVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKKMAE EKMEKKM KKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKM-KKKKNVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Tan0003933 vs. NCBI nr
Match: XP_023004364.1 (ethylene-responsive transcription factor 1B-like [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 6.2e-85
Identity = 180/224 (80.36%), Postives = 196/224 (87.50%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+DN LFGYQENF      +FPGK ENSHLSF+FNYLEEML ADM  ++   +SSSDSS
Sbjct: 1   MSLDNHLFGYQENF-----RTFPGK-ENSHLSFDFNYLEEMLFADM--SSLSSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQ-PQEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D+VVQ+D+ P+EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIVVQDDRTPKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFP EVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPAEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKK+AE EKMEKKM  KKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKIAEAEKMEKKM--KKKNVVVFEDLGVEYLEELLSLTS 211

[Close]

BLAST of Tan0003933 vs. NCBI nr
Match: KAG6593075.1 (Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 181/224 (80.80%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+ N LFGYQENF     E+FPGK +NSHLSF FNYLEEML ADM  + +  +SSSDSS
Sbjct: 1   MSLHNHLFGYQENF-----ENFPGK-QNSHLSFHFNYLEEMLFADM--SLSSSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQPQ-EERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D++VQ+ Q Q EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFPVEVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKKMAE EKMEKKM KKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKM-KKKKNVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Tan0003933 vs. ExPASy TrEMBL
Match: A0A6J1KW25 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111497706 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.0e-85
Identity = 180/224 (80.36%), Postives = 196/224 (87.50%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+DN LFGYQENF      +FPGK ENSHLSF+FNYLEEML ADM  ++   +SSSDSS
Sbjct: 1   MSLDNHLFGYQENF-----RTFPGK-ENSHLSFDFNYLEEMLFADM--SSLSSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQ-PQEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D+VVQ+D+ P+EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIVVQDDRTPKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFP EVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPAEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKK+AE EKMEKKM  KKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKIAEAEKMEKKM--KKKNVVVFEDLGVEYLEELLSLTS 211

[Close]

BLAST of Tan0003933 vs. ExPASy TrEMBL
Match: A0A6J1H6Z0 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111460680 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84
Identity = 181/224 (80.80%), Postives = 194/224 (86.61%), Query Frame = 0


Query: 1   MSVDNDLFGYQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSS 60
           MS+ N LFGYQENF     E+FPGK +NSHLSF FNYLEEML ADM    +  +SSSDSS
Sbjct: 1   MSLHNHLFGYQENF-----ENFPGK-QNSHLSFHFNYLEEMLFADM----SLSSSSSDSS 60

Query: 61  SCSSPMMQVKEELEEGSLSDVVVQEDQPQ-EERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
            C SP M VKEE+E+G   D++VQ+ Q Q EERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  PCLSPEMHVKEEIEDG---DIIVQDAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCMRGALATLNFPVEVVRESL EMKYRW+VGCSPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIRRKKMAEVEKMEKKMNKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+IRRKKMAE EKMEKKM KKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKM-KKKKNVVVFEDLGVEYLEELLSLTS 210

[Close]

BLAST of Tan0003933 vs. ExPASy TrEMBL
Match: A0A0A0K4U4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-79
Identity = 179/235 (76.17%), Postives = 198/235 (84.26%), Query Frame = 0


Query: 1   MSVDNDLFG-YQENFLWNN--NESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSSS 60
           MS+ +D FG YQENFLWNN  N+SF   +     SF+FNYL +ML  DM+    E  SSS
Sbjct: 1   MSILSDFFGNYQENFLWNNDHNQSF---ISGEETSFDFNYLNDMLFDDMV-FAEETMSSS 60

Query: 61  DSSSCSSPM-MQVKE-----ELEEGSLSD-VVVQEDQP-QEERAYRGVRRRPWGKYAAEI 120
           DSSSCSSP+ +QVKE     E+EEGS+ D VVV+EDQ  +EER YRGVRRRPWGKYAAEI
Sbjct: 61  DSSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEI 120

Query: 121 RDSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVG 180
           RDSTRQGVRVWLGTF+SAEAAALAYDQAAFCMRG LATLNFP+EVVRESLREMKYRW+VG
Sbjct: 121 RDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVG 180

Query: 181 CSPVLALKRRHSIRRKKMAEVEKMEKK-MNKKKKTVVVFEDLGVEYLEELLSLTS 224
            SPVLALKRRHSI+RK+MAEVEKMEKK M KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 SSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGVEYLEELLSLTS 231

[Close]

BLAST of Tan0003933 vs. ExPASy TrEMBL
Match: A0A5D3C9K8 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00670 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 178/235 (75.74%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MSVDNDLFG-YQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGT-SSSD 60
           MS+ +DLFG YQENFLWNN+            SF+FNYL +ML  DM+   AE T SSSD
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQEESSFDFNYLNKMLFDDMVSVAAEETMSSSD 60

Query: 61  SSSCSSP-MMQVKE-----ELEEGSLS-DVVVQEDQP-QEERAYRGVRRRPWGKYAAEIR 120
           SSSCSS  +MQVKE     E++EGS S DVVV+EDQ  +EER YRGVRRRPWGKYAAEIR
Sbjct: 61  SSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGC 180
           DSTRQGVRVWLGTF+SAEAAALAYDQAAFCMRG LATLNFP+EVVRESLREMKYR +VG 
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRREVGS 180

Query: 181 SPVLALKRRHSIRRKKMAEVEKMEKKM--NKKKKTVVVFEDLGVEYLEELLSLTS 224
           SPVLALKRRHSI+RK+MAEVEKMEKKM   KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Tan0003933 vs. ExPASy TrEMBL
Match: A0A1S3BQG1 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103492600 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 178/235 (75.74%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MSVDNDLFG-YQENFLWNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGT-SSSD 60
           MS+ +DLFG YQENFLWNN+            SF+FNYL +ML  DM+   AE T SSSD
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQEESSFDFNYLNKMLFDDMVSVAAEETMSSSD 60

Query: 61  SSSCSSP-MMQVKE-----ELEEGSLS-DVVVQEDQP-QEERAYRGVRRRPWGKYAAEIR 120
           SSSCSS  +MQVKE     E++EGS S DVVV+EDQ  +EER YRGVRRRPWGKYAAEIR
Sbjct: 61  SSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGC 180
           DSTRQGVRVWLGTF+SAEAAALAYDQAAFCMRG LATLNFP+EVVRESLREMKYR +VG 
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRREVGS 180

Query: 181 SPVLALKRRHSIRRKKMAEVEKMEKKM--NKKKKTVVVFEDLGVEYLEELLSLTS 224
           SPVLALKRRHSI+RK+MAEVEKMEKKM   KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Tan0003933 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 104/211 (49.29%), Postives = 134/211 (63.51%), Query Frame = 0


Query: 12  ENFLWNNNESFPGKLENSH-LSFEFNYLEEMLLADMLDTTAEGTSSSDSSSCSSPMMQVK 71
           E  + ++ +SF     N++ L F  N  EEM L  +++ + + T   DS S   P+  V 
Sbjct: 16  EYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQT-YIDSDSQDLPIKSVS 75

Query: 72  EELEEGSLSDVVVQEDQPQEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAA 131
                             + E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTFESAE A
Sbjct: 76  SR----------------KSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEA 135

Query: 132 ALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWDVGCSPVLALKRRHSIRRKKMAEV 191
           ALAYDQAAF MRG+ A LNF  E V+ESL E+KY ++ GCSPV+ALKR+HS+RR+   + 
Sbjct: 136 ALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKK 195

Query: 192 EKMEKKMNKKKK--TVVVFEDLGVEYLEELL 220
            K     ++  K   VVVFEDLG +YLEELL
Sbjct: 196 TKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Tan0003933 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-39
Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 56  SSDSSSCSSPMMQVKEELEEGSLSDVVVQEDQP-QEERAYRGVRRRPWGKYAAEIRDSTR 115
           S D  S  SP M +KEE++ G +S+   +E     EER+YRGVR+RPWGK+AAEIRDSTR
Sbjct: 47  SDDFFSFESPEMMIKEEIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTR 106

Query: 116 QGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMK-YRWDVGCSPV 175
            G+RVWLGTF+ AE AALAYDQAAF  +G+LATLNFPVEVVRESL++M+      G SPV
Sbjct: 107 NGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPV 166

Query: 176 LALKRRHSIRRK---------------------------KMAEVEKMEKKMNKKKKTVVV 220
           +ALKR+HS+R +                             +     +  + ++  T+VV
Sbjct: 167 MALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVV 226

[Close]

BLAST of Tan0003933 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 144.8 bits (364), Expect = 8.2e-35
Identity = 102/256 (39.84%), Postives = 143/256 (55.86%), Query Frame = 0


Query: 10  YQENFL-------------WNNNESFPGKLENSHLSFEFNYLEEMLLADMLDTTAEGTSS 69
           YQ NFL             W++ ESF  +    H SF+    +  LL+   D   +   +
Sbjct: 3   YQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFD----QSFLLSSPTDNYCDDFFA 62

Query: 70  SDSSSCSSPMMQVKEELEEGSLSDVVVQEDQPQEERAYRGVRRRPWGKYAAEIRDSTRQG 129
            +SS        +KEE +E +++         +EE++YRGVR+RPWGK+AAEIRDSTR+G
Sbjct: 63  FESSI-------IKEEGKEATVA-------AEEEEKSYRGVRKRPWGKFAAEIRDSTRKG 122

Query: 130 VRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMK-YRWDVGCSPVLA 189
           +RVWLGTF++AEAAALAYDQAAF ++G+LA LNFP +VV ESLR+M+    + G SPV+A
Sbjct: 123 IRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIA 182

Query: 190 LKRRHSIRRK---------------------------KMAEVEKMEKKMN-----KKKKT 220
           LKR+HS+R +                             + +    +K +     +   T
Sbjct: 183 LKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTT 240

[Close]

BLAST of Tan0003933 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-21
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 31  LSFEFNYLEEMLLADMLDTTAEG-----TSSSDSSSCSSPMMQVKEELEEGSLSDVVVQE 90
           L  + N  E+ML+  +L+    G     +SSSD    S P ++++      ++  V V++
Sbjct: 71  LPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKK 130

Query: 91  DQPQEERA---------YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQ 150
           ++     A         YRGVR+RPWGK+AAEIRD  + G RVWLGTFE+AE AALAYD+
Sbjct: 131 EKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDR 190

Query: 151 AAFCMRGALATLNFPVEV 155
           AAF MRG+ A LNFP+ V
Sbjct: 191 AAFRMRGSRALLNFPLRV 208

[Close]

BLAST of Tan0003933 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 )

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-20
Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = 0


Query: 26  LENSHLSFEFNYLEEMLLADMLDTTAEGTSSSDSSSCSSPMMQVKEELEEGSLSDVV-VQ 85
           +E  H S   N L      +    T   T ++ S   +S + Q K  L   S+S  V  +
Sbjct: 24  METDHPSLFTNQLH-----NFHSETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTK 83

Query: 86  EDQPQEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMRGA 145
            ++ +EER YRGVRRRPWGKYAAEIRD  ++G R+WLGT+++A  A  AYDQAAF +RG 
Sbjct: 84  TEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGR 143

Query: 146 LATLNFPVEV 155
            A LNFP++V
Sbjct: 144 KAILNFPLDV 148

The following BLAST results are available for this feature:

BLAST of Tan0003933 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A3Q7I5Y9	1.5e-44	55.56	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8LDC8	3.1e-39	49.29	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8VYM0	5.9e-38	49.74	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	1.2e-33	39.84	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	1.6e-22	76.47	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Tan0003933 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899832.1	1.3e-87	82.17	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_023514563.1	5.6e-86	81.70	ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025485.1	2.1e-85	81.25	Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma sub...	[more]
XP_023004364.1	6.2e-85	80.36	ethylene-responsive transcription factor 1B-like [Cucurbita maxima]	[more]
KAG6593075.1	1.4e-84	80.80	Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0003933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KW25	3.0e-85	80.36	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1H6Z0	1.9e-84	80.80	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0K4U4	1.9e-79	76.17	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=...	[more]
A0A5D3C9K8	2.7e-78	75.74	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BQG1	2.7e-78	75.74	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Tan0003933 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	2.2e-40	49.29	ethylene response factor 1	[more]
AT2G31230.1	4.2e-39	49.74	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	8.2e-35	39.84	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT4G17500.1	6.7e-21	44.20	ethylene responsive element binding factor 1	[more]
AT5G61600.1	4.4e-20	45.38	ethylene response factor 104	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..67
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 25..221
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 117..133 score: 64.71 coord: 94..105 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 93..157 e-value: 3.8E-36 score: 136.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 94..143 e-value: 6.2E-14 score: 52.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 93..151 score: 22.77396
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 94..152 e-value: 1.31189E-20 score: 80.0083
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 93..154 e-value: 5.4E-26 score: 92.5
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 25..221
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 93..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003933.1	Tan0003933.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity