Tan0003841 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK Homology
BLAST of Tan0003841 vs. NCBI nr
Match: KGN49108.1 (hypothetical protein Csa_002989 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of Tan0003841 vs. NCBI nr
Match: TYK13043.1 (Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Tan0003841 vs. NCBI nr
Match: KAG7026631.1 (hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28 Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of Tan0003841 vs. NCBI nr
Match: KAG6594665.1 (Ankyrin repeat domain-containing protein 13C, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.0 bits (336), Expect = 5.4e-28 Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0
BLAST of Tan0003841 vs. NCBI nr
Match: KAG6603780.1 (Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.7 bits (335), Expect = 7.1e-28 Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A0A0KHT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513720 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 8.2e-30 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A5D3CM93 (Ankyrin repeat family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006450 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.3e-29 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A4S4DD10 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005506 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.9e-17 Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A2P5EAN9 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_215930 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: W9RHJ5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018053 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Tan0003841 vs. TAIR 10
Match: AT1G11740.1 (ankyrin repeat family protein ) HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06 Identity = 31/77 (40.26%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Tan0003841 vs. TAIR 10
Match: AT1G62045.1 (BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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