Tan0003841 (gene) Snake gourd v1

Overview
NameTan0003841
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAnkyrin repeat family protein
LocationLG03: 77190563 .. 77190799 (+)
RNA-Seq ExpressionTan0003841
SyntenyTan0003841
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA

mRNA sequence

ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA

Coding sequence (CDS)

ATGGCTGCAGAAGCACCAAGCTGGGCCGACCAATGGGGAGCCGGAGGGATTGGAGCCATGGAAGAAGATGACGGCAGTAAAGCCAAAGGAGACCGCAGCTCAGACAAGAAGGCTGGTTCTAAGCCTGGATTTGCAAAAGCCAAGGCGGCGACCGTGGCTGGTGCCAAAAAGATTGGAAGTGGGATATCTAATGGCATCAAATGGATCATGAACCCACGCAAGAAAAGCTCCAAGTAA

Protein sequence

MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGSGISNGIKWIMNPRKKSSK
Homology
BLAST of Tan0003841 vs. NCBI nr
Match: KGN49108.1 (hypothetical protein Csa_002989 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MAAEAPSWADQWGAGGIGAMEEDD SKAKG RS+DKK GSKPGFAK KAATVAGAKKIGS
Sbjct: 1  MAAEAPSWADQWGAGGIGAMEEDDDSKAKGGRSTDKKGGSKPGFAKVKAATVAGAKKIGS 60

Query: 61 GISNGIKWIMNPRKKSSK 79
          GISNGIKWIMNPRKKSSK
Sbjct: 61 GISNGIKWIMNPRKKSSK 78

BLAST of Tan0003841 vs. NCBI nr
Match: TYK13043.1 (Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MAAEAPSWADQWGAGGIGAMEEDD SKAKG RS+DKK+GSKPGFAKAKAAT+AGAKKIGS
Sbjct: 1  MAAEAPSWADQWGAGGIGAMEEDD-SKAKGGRSTDKKSGSKPGFAKAKAATLAGAKKIGS 60

Query: 61 GISNGIKWIMNPRKKSSK 79
          GISNGIKWIMNPRKKSSK
Sbjct: 61 GISNGIKWIMNPRKKSSK 77

BLAST of Tan0003841 vs. NCBI nr
Match: KAG7026631.1 (hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MAAEAPSWADQWGAGGIGA+EEDDGSKAKG+  SDKKA SKPGFAKAKAATVAGAKKIGS
Sbjct: 1  MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKAATVAGAKKIGS 60

Query: 61 GISNGIKWIMNPRKKSS 78
          GISNGIKWIMNPRKK+S
Sbjct: 61 GISNGIKWIMNPRKKNS 77

BLAST of Tan0003841 vs. NCBI nr
Match: KAG6594665.1 (Ankyrin repeat domain-containing protein 13C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 5.4e-28
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0

Query: 1   MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
           MAAEAPSWADQWGAGGIGA+EEDDGSKAKG+  SDKKA SKPGFAKAK ATVAGAKKIGS
Sbjct: 615 MAAEAPSWADQWGAGGIGAIEEDDGSKAKGEHISDKKARSKPGFAKAKGATVAGAKKIGS 674

Query: 61  GISNGIKWIMNPRKKSS 78
           GISNGIKWIMNPRKK+S
Sbjct: 675 GISNGIKWIMNPRKKNS 691

BLAST of Tan0003841 vs. NCBI nr
Match: KAG6603780.1 (Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.7 bits (335), Expect = 7.1e-28
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0

Query: 1   MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
           MAAEAPSWADQWGAGGIGAMEEDDGSKAKG + SDKK GSK G AKA AATVAGAKKIGS
Sbjct: 622 MAAEAPSWADQWGAGGIGAMEEDDGSKAKGGQGSDKKTGSKSGIAKAMAATVAGAKKIGS 681

Query: 61  GISNGIKWIMNPRKKSSK 79
           GISNGIKWIMNPRKKSSK
Sbjct: 682 GISNGIKWIMNPRKKSSK 699

BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A0A0KHT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513720 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.2e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MAAEAPSWADQWGAGGIGAMEEDD SKAKG RS+DKK GSKPGFAK KAATVAGAKKIGS
Sbjct: 1  MAAEAPSWADQWGAGGIGAMEEDDDSKAKGGRSTDKKGGSKPGFAKVKAATVAGAKKIGS 60

Query: 61 GISNGIKWIMNPRKKSSK 79
          GISNGIKWIMNPRKKSSK
Sbjct: 61 GISNGIKWIMNPRKKSSK 78

BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A5D3CM93 (Ankyrin repeat family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006450 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.3e-29
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MAAEAPSWADQWGAGGIGAMEEDD SKAKG RS+DKK+GSKPGFAKAKAAT+AGAKKIGS
Sbjct: 1  MAAEAPSWADQWGAGGIGAMEEDD-SKAKGGRSTDKKSGSKPGFAKAKAATLAGAKKIGS 60

Query: 61 GISNGIKWIMNPRKKSSK 79
          GISNGIKWIMNPRKKSSK
Sbjct: 61 GISNGIKWIMNPRKKSSK 77

BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A4S4DD10 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005506 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-17
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 1   MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
           MA EAPSWADQWGAGGIGAME +D  KA GD+ SDKK GS  G  KAKA  +AGA+K+ S
Sbjct: 144 MATEAPSWADQWGAGGIGAMEGEDNKKANGDKGSDKKTGSSAGLGKAKAVAMAGAQKVKS 203

Query: 61  GISNGIKWIMNPRKK 76
           G  NGIKWI N  +K
Sbjct: 204 GTCNGIKWIKNQCQK 218

BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: A0A2P5EAN9 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_215930 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MA+E PSWADQWGAGGIGAMEEDD + AK +  ++KK   K G  KAKAA +AGA+KI S
Sbjct: 22 MASEGPSWADQWGAGGIGAMEEDDSTTAKKESGANKKGEGKAGLTKAKAAALAGAQKIKS 81

Query: 61 GISNGIKWIMNPRKKSS 78
          G SNGIKWI N  +K +
Sbjct: 82 GTSNGIKWIKNQCQKKN 98

BLAST of Tan0003841 vs. ExPASy TrEMBL
Match: W9RHJ5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018053 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
          MA+EAPSWADQWGAGGIGA+EE+D + +K D  ++KK   K G  KAKAA +AGA+KI S
Sbjct: 1  MASEAPSWADQWGAGGIGALEEEDNTNSKKDTGANKKGDGKAGLTKAKAAALAGAQKIKS 60

Query: 61 GISNGIKWIMNPRKK 76
          G SNGIKWI N  +K
Sbjct: 61 GTSNGIKWIKNQCQK 75

BLAST of Tan0003841 vs. TAIR 10
Match: AT1G11740.1 (ankyrin repeat family protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06
Identity = 31/77 (40.26%), Postives = 41/77 (53.25%), Query Frame = 0

Query: 1   MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSKPGFAKAKAATVAGAKKIGS 60
           MA+EAPSWADQWG GGIG M  ++ +  K D +  K   +K G  KAK     G      
Sbjct: 573 MASEAPSWADQWGTGGIGVMAAEETTDGKKDVTGKKSGKTKAGINKAKIVVFIGV----- 632

Query: 61  GISNGIKWIMNPRKKSS 78
              N +K ++  +KK S
Sbjct: 633 ---NWMKNLVQRKKKDS 641

BLAST of Tan0003841 vs. TAIR 10
Match: AT1G62045.1 (BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0

Query: 1  MAAEAPSWADQWGAGGIGAMEEDDGSKAKGDRSSDKKAGSK 42
          MA+EAPSWADQWG GGIG M E+D +K+K D        +K
Sbjct: 1  MASEAPSWADQWGTGGIGEMPEEDNTKSKKDAGGKNSGQTK 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN49108.11.7e-2993.59hypothetical protein Csa_002989 [Cucumis sativus][more]
TYK13043.11.1e-2893.59Ankyrin repeat family protein, putative isoform 1 [Cucumis melo var. makuwa][more]
KAG7026631.11.9e-2892.21hypothetical protein SDJN02_10634, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6594665.15.4e-2890.91Ankyrin repeat domain-containing protein 13C, partial [Cucurbita argyrosperma su... [more]
KAG6603780.17.1e-2891.03Ankyrin repeat domain-containing protein 13B, partial [Cucurbita argyrosperma su... [more]
Match NameE-valueIdentityDescription
A0A0A0KHT98.2e-3093.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513720 PE=4 SV=1[more]
A0A5D3CM935.3e-2993.59Ankyrin repeat family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX... [more]
A0A4S4DD107.9e-1766.67Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0055... [more]
A0A2P5EAN91.5e-1563.64Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_215... [more]
W9RHJ52.0e-1564.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018053 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11740.16.2e-0640.26ankyrin repeat family protein [more]
AT1G62045.11.1e-0556.10BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availablePANTHERPTHR33386OS02G0740600 PROTEINcoord: 1..76
NoneNo IPR availablePANTHERPTHR33386:SF26REPEAT PROTEIN, PUTATIVE-RELATEDcoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0003841.1Tan0003841.1mRNA