Tan0003835 (gene) Snake gourd v1

Overview


Name	Tan0003835
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NAD(P)H-quinone oxidoreductase subunit N
Location	LG05: 3952089 .. 3954206 (+)
RNA-Seq Expression	Tan0003835
Synteny	Tan0003835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACAAACTACAGCCATAGCCATGGCATCTGCATAACTTCGACCTCGTCTTAATTCCCATCCAATTCCTCAGCCATGGCCCTGTTTCTTTCTCCTCTCATCATTCTTCCTTCTTCATGCAATTTCTCTTTCAGAGAACCCTCACCATGGCCCCTGTAGCCTCCATGTTGAATGGAGCAGCCCTAGCGCCGCCACTCCATTTTCATCCAAGGCGGCTCCATCAACCGAACTCGGCCGCGACGCTGCCGGTGATCGGGCGGAGGGCCAGATTCGGCGCCGGCAAAGGCAGGGCAGCGACGGTGAGATGCGAGGGAATAGGAATTGGCGATTTCATCGGCGGAGATTTGCTGAAATTTGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCGATTTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTCCGCTACCAAGGCTACTACTTCCTCGATCTATCCGCTCGCGGCCTCGGCGATCCCGAGACCACTCTCACCAAGATTCATCCCGTTTGCCCTGTCCGTTGAATCGAATCCCTACGGCTAATTCAATTCTATCGCGATTCTCATATTTTTTCCTTTGTTCAATTGTTCTTACTCTGGCTTCGAATTGCAGGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTTGATTACAGGCTCGCGGCTCTGCCTCCAAACGCCAAGGGACTGGTCGTGTGGATAATCGAGGCGAAGGTGAGATTCTTTAATCCGCCATTAACGAATCGGAATCAGCCAATTTGAGAAGAATGGATTACCGAATTGCAAACACTGTTCAGGTTCTGTCGAAGACGGAGTTGCAGTTTCTTGCTCTGCTGCCGACTCTCCGGCCAAAAGTCAGAGTCATCGCCGAGTGCGGGAATTGGTAGGGTTTCTTCTCTGCTTTCTCTAGAAAAGTTGAAGAAATAGTTTCTGGTGGACAACAAATGAAAGCTTAACTACTTTAACTGCCAGGATCCAGAAATAGTTTTAAAAAGAGAATAAAAAATGATTAATAATAATATAGATTCTTAATCTCAATTTATTAATAGAAAATTAAGATATCACAGGGTTAAATTAGTAATTTAAATATATATTTTTTGAAAATTGGCTAAATTTGATTGTTTTGGTTAGAGCATAGTTTGAAATTACTCTGCCTGTGATAAAAAACAATAAAATTAAATTCATTTAAAAGCTCCATCACTCAACAAATCACTATTTATATCATCAATTAAAAGTTCAAAGTTTTGAATCTAACTTCTATGAGAAAAAATATTCAATTTGAAGTTGTCATAATTGATTGTTTCATAATAAGGGTTGGATGTGGATTTGAAATTTACATATCTCTCTAATACCAAGGATTATAAATTCAAGATAATTTTACAATTTCTTTCCCATACAACCGTGGCGAAAGTTTATAGTACTACAATAGTACCATACTTCCTTTGTTAACACTATGATTTTGAGTTTATAAAAAGTTTTTTTAATGCTAATTGACCCCACATGATTTTCAAACTGATGTTAAAGTGACAAACAATAAGTGAGAGTAGTATATAAATTTTTTATACTAACAGTAATACTAGAATTTTTCTTTAATGGTACAAAAGTGTCAGTCACGATTTATATTGTGACAGTCTCTTCGAATAATTTCTCACCCACACGTTATTGAACAAAAAAAAAACATTTAATAAGCATTAGAATTTGAAATCACTCCAAATTTTAGACACAAATAAATCATAACTTATGATGTGAGCTGGAAGGTTGACTTCTTTGTTGTTGCAGGAGGAAGTTCATGTGGAAGCCGCTCAAGGAGATTGCAGGAGGAGCTTGAAAGACCAGTAGGAATGGAGAATAGGGATTAATTCATCAATGAATAAAAAAATACAATTTTTTTTCGAGTAATTAACTTAAATTATTGGTTAAACAGTTCAGCACTGCAGATTCCCAAGAAGATTATGGATTTTTAAGGTTTAGAGTTATATTATTTAGAGTAAATTGCAAATTAATAATAGTATTGTACTTTTTCATGCAAATATTATTACTTCAGAGAATCGTATAATATTACATGCGTTTATCA

mRNA sequence

ACACAAACTACAGCCATAGCCATGGCATCTGCATAACTTCGACCTCGTCTTAATTCCCATCCAATTCCTCAGCCATGGCCCTGTTTCTTTCTCCTCTCATCATTCTTCCTTCTTCATGCAATTTCTCTTTCAGAGAACCCTCACCATGGCCCCTGTAGCCTCCATGTTGAATGGAGCAGCCCTAGCGCCGCCACTCCATTTTCATCCAAGGCGGCTCCATCAACCGAACTCGGCCGCGACGCTGCCGGTGATCGGGCGGAGGGCCAGATTCGGCGCCGGCAAAGGCAGGGCAGCGACGGTGAGATGCGAGGGAATAGGAATTGGCGATTTCATCGGCGGAGATTTGCTGAAATTTGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCGATTTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTCCGCTACCAAGGCTACTACTTCCTCGATCTATCCGCTCGCGGCCTCGGCGATCCCGAGACCACTCTCACCAAGATTCATCCCGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTTGATTACAGGCTCGCGGCTCTGCCTCCAAACGCCAAGGGACTGGTCGTGTGGATAATCGAGGCGAAGGTTCTGTCGAAGACGGAGTTGCAGTTTCTTGCTCTGCTGCCGACTCTCCGGCCAAAAGTCAGAGTCATCGCCGAGTGCGGGAATTGGAGGAAGTTCATGTGGAAGCCGCTCAAGGAGATTGCAGGAGGAGCTTGAAAGACCAGTAGGAATGGAGAATAGGGATTAATTCATCAATGAATAAAAAAATACAATTTTTTTTCGAGTAATTAACTTAAATTATTGGTTAAACAGTTCAGCACTGCAGATTCCCAAGAAGATTATGGATTTTTAAGGTTTAGAGTTATATTATTTAGAGTAAATTGCAAATTAATAATAGTATTGTACTTTTTCATGCAAATATTATTACTTCAGAGAATCGTATAATATTACATGCGTTTATCA

Coding sequence (CDS)

ATGCAATTTCTCTTTCAGAGAACCCTCACCATGGCCCCTGTAGCCTCCATGTTGAATGGAGCAGCCCTAGCGCCGCCACTCCATTTTCATCCAAGGCGGCTCCATCAACCGAACTCGGCCGCGACGCTGCCGGTGATCGGGCGGAGGGCCAGATTCGGCGCCGGCAAAGGCAGGGCAGCGACGGTGAGATGCGAGGGAATAGGAATTGGCGATTTCATCGGCGGAGATTTGCTGAAATTTGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCGATTTACTCGCCGCACGAAGGCGGCTACGAAGGCCGATACCTAAATCGCCTCCGCTACCAAGGCTACTACTTCCTCGATCTATCCGCTCGCGGCCTCGGCGATCCCGAGACCACTCTCACCAAGATTCATCCCGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTTGATTACAGGCTCGCGGCTCTGCCTCCAAACGCCAAGGGACTGGTCGTGTGGATAATCGAGGCGAAGGTTCTGTCGAAGACGGAGTTGCAGTTTCTTGCTCTGCTGCCGACTCTCCGGCCAAAAGTCAGAGTCATCGCCGAGTGCGGGAATTGGAGGAAGTTCATGTGGAAGCCGCTCAAGGAGATTGCAGGAGGAGCTTGA

Protein sequence

MQFLFQRTLTMAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA

Homology

[Close]

BLAST of Tan0003835 vs. ExPASy Swiss-Prot
Match: Q9LVM2 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.1e-79
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 58  RAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQG 117
           R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL+ QG
Sbjct: 40  RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQG 99

Query: 118 YYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVW 177
           YYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAALPP+AKGLVVW
Sbjct: 100 YYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVW 159

Query: 178 IIEAKVLSKTELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 224
           ++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 160 VLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

[Close]

BLAST of Tan0003835 vs. ExPASy Swiss-Prot
Match: B8HUU1 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=ndhN PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-35
Identity = 72/150 (48.00%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 84  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 143
           Q++ D+E+  AL IY P EGG+EGRY  RLR  GY  L +SA GLGD  + LT++H V P
Sbjct: 9   QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68

Query: 144 AHLGKQP-------IARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQFLALLP 203
            HLGK         +  ++ PP V+Y L  LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69  PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128

Query: 204 TLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
              PKV+++ E G  R+F W+PLKE+A  A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMAAAA 158

[Close]

BLAST of Tan0003835 vs. ExPASy Swiss-Prot
Match: B7JYJ3 (NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=ndhN PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.9e-34
Identity = 69/141 (48.94%), Postives = 95/141 (67.38%), Query Frame = 0


Query: 89  VEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGK 148
           +E+  +LA+Y+P EGG+EGRY  RLR  GY+   L+ARGLGD    L  +H V P HLGK
Sbjct: 14  LEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPPHLGK 73

Query: 149 QPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQFLALLPTLRPK 208
           + I +       ++ PP   Y+L  LPP +KGLV+WI+E  +LS+TEL++LA LPTL P+
Sbjct: 74  KNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPTLEPR 133

Query: 209 VRVIAECGNWRKFMWKPLKEI 223
           ++V+ E G  R F WKPL E+
Sbjct: 134 LKVVIELGGERYFSWKPLPEV 154

[Close]

BLAST of Tan0003835 vs. ExPASy Swiss-Prot
Match: Q31L05 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ndhN PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 84  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 143
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 144 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQFLALLP 203
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 204 TLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
              P+++V+ E G  R F W+PL  +A  A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEAA 158

[Close]

BLAST of Tan0003835 vs. ExPASy Swiss-Prot
Match: Q5N0W6 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=ndhN PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 74/150 (49.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 84  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 143
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 144 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQFLALLP 203
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 204 TLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
              P+++V+ E G  R F W+PL  +A  A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEAA 158

[Close]

BLAST of Tan0003835 vs. NCBI nr
Match: XP_023533875.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 204/216 (94.44%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL  P SAATL VIGRR RFG GKGRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 216

[Close]

BLAST of Tan0003835 vs. NCBI nr
Match: XP_022947360.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 204/216 (94.44%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL  P SAATL VIGRR RFG GKGRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 216

[Close]

BLAST of Tan0003835 vs. NCBI nr
Match: XP_023007243.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 202/216 (93.52%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL    S ATL VIGRR RFG GKGRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 216

[Close]

BLAST of Tan0003835 vs. NCBI nr
Match: KAG6605370.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035327.1 NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 201/214 (93.93%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL  P SAATL VIGRR RFG GKGRA TVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAVTVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 225
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Tan0003835 vs. NCBI nr
Match: XP_004139925.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46772.1 hypothetical protein Csa_020955 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 193/214 (90.19%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           MAP+ASM NGA LAPPLHFH  R H   S A LP+  RR+    G GRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 225
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Tan0003835 vs. ExPASy TrEMBL
Match: A0A6J1G6N3 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451247 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 204/216 (94.44%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL  P SAATL VIGRR RFG GKGRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 216

[Close]

BLAST of Tan0003835 vs. ExPASy TrEMBL
Match: A0A6J1L763 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499786 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.0e-114
Identity = 202/216 (93.52%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           M P+ASMLNGAALAP LH HPRRL    S ATL VIGRR RFG GKGRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 227
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGGA 216

[Close]

BLAST of Tan0003835 vs. ExPASy TrEMBL
Match: A0A0A0KEC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 193/214 (90.19%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           MAP+ASM NGA LAPPLHFH  R H   S A LP+  RR+    G GRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 225
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Tan0003835 vs. ExPASy TrEMBL
Match: A0A1S3C430 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496258 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 193/214 (90.19%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           MAPVASM NGA LAPPLH H  R H   S A +P+  RR+ F  G GRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 225
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Tan0003835 vs. ExPASy TrEMBL
Match: A0A5A7SWJ9 (NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00760 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.4e-100
Identity = 180/201 (89.55%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 11  MAPVASMLNGAALAPPLHFHPRRLHQPNSAATLPVIGRRARFGAGKGRAATVRCEGIGIG 70
           MAPVASM NGA LAPPLH H  R H   S A +P+  RR+ F  G GRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 71  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 130
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 131 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKTELQ 190
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSK ELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 191 FLALLPTLRPKVRVIAECGNW 212
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Tan0003835 vs. TAIR 10
Match: AT5G58260.1 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-80
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 58  RAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQG 117
           R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL+ QG
Sbjct: 40  RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQG 99

Query: 118 YYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVW 177
           YYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAALPP+AKGLVVW
Sbjct: 100 YYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVW 159

Query: 178 IIEAKVLSKTELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 224
           ++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 160 VLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

[Close]

BLAST of Tan0003835 vs. TAIR 10
Match: AT5G58260.2 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 222.6 bits (566), Expect = 3.1e-58
Identity = 100/126 (79.37%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 58  RAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQG 117
           R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL+ QG
Sbjct: 40  RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQG 99

Query: 118 YYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVW 177
           YYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAALPP+AKGLVVW
Sbjct: 100 YYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVW 159

Query: 178 IIEAKV 184
           ++EAKV
Sbjct: 160 VLEAKV 163

The following BLAST results are available for this feature:

BLAST of Tan0003835 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVM2	4.1e-79	81.33	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana ...	[more]
B8HUU1	4.7e-35	48.00	NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / AT...	[more]
B7JYJ3	6.9e-34	48.94	NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801...	[more]
Q31L05	1.3e-32	49.33	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC ...	[more]
Q5N0W6	1.3e-32	49.33	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144...	[more]

BLAST of Tan0003835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533875.1	2.6e-115	94.44	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. p...	[more]
XP_022947360.1	3.4e-115	94.44	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata]	[more]
XP_023007243.1	1.4e-113	93.52	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima]	[more]
KAG6605370.1	1.4e-113	93.93	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic, partial [Cucurbita argy...	[more]
XP_004139925.1	2.4e-108	90.19	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46...	[more]

BLAST of Tan0003835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6N3	1.7e-115	94.44	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX...	[more]
A0A6J1L763	7.0e-114	93.52	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A0A0KEC3	1.1e-108	90.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1	[more]
A0A1S3C430	1.1e-108	90.19	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A5A7SWJ9	4.4e-100	89.55	NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Tan0003835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58260.1	2.9e-80	81.33	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]
AT5G58260.2	3.1e-58	79.37	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PFAM	PF11909	NdhN	coord: 84..221 e-value: 4.4E-56 score: 188.8
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PANTHER	PTHR35515	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT N, CHLOROPLASTIC	coord: 47..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003835.1	Tan0003835.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding