Tan0003775 (gene) Snake gourd v1

Overview


Name	Tan0003775
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	MADS-box protein
Location	LG10: 2588016 .. 2593931 (+)
RNA-Seq Expression	Tan0003775
Synteny	Tan0003775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAACACATCTCACAATAACTAAACACATCTCTATTGATTATTTATTTATTTATTATTATTTTTTTTTGTTTGTTGATATTTATTTGCCTTTTTCTTCTTCTGGGGTTTTCAGATTCTTCCCCAATTTTTCCTTTTTTGCTCTCACAAACACTGCTTTAAGCTCTCTCAAGCTAGGGTTTGATTCCACCGATGAATTATGCCTTGTTTGGCTTCAAGATAAAAACAAGGGATTTTCTATTTTTCCATTTTTTTAAATTTTCCATTATTGTTTCTGTGTTTCTTTATGAAATCAATCACTTCCCAAATCTGCTAATTTTGGAAGGCTTTCAGTTTTTGGGTTGATACAAACAAGCCCTTAAGTTGAGATCTTTTTAAAAAAAAAAAAATTATTTCCCTTTTTGGCCCTCCCCGTCTCTTCTTTCACTCTGCTCTCTCAGAAACCAGGTCTGTTTGGTAAGATTTCTGGCTCCATTTTCTTGTCCTCTTTCATGGGATTTTTCCTTTTCTTTTTTTTTTTTCAAAAAATAAAACCCATTTTTTCTGTTGCATTATATTTAATTTGTTCCTGTTCTTCATCTTCCTTAGGTGCAATTTTTATTAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAGGTTGGAAAATGGTGAGAGGAAAAACTCAGATGAGGCGAATCGAGAACGCGACGAGTCGGCAAGTTACGTTTTCGAAACGGCGTAATGGGTTGCTGAAGAAGGCGTTTGAACTCTCCGTTCTTTGTGAAGCTGAAGTTGCTCTTATCATTTTCTCTTCTAGAGGGAAGCTTTATGAATTTGCTAGCTCAAGGTACGGTAATAACTCATTTTTAAACTTATTCTTATTTTCTTATTACTATTATTTTTCTATTTTTTTTTACTGATATGAGCGAATAAGGATGTGGGTTTTTTTTTTTCCTTTCTTTCTTGGGTGTTCAAATTTGATTTATGTTTGGGTATATTTTTTACTGATATGAGCAAATATATGTTTGCTTCTTGAAATTTGTTTGGGATATTTTTTCACTTTTTTTTTGTGAATATATTTAAATTTGAAGACAAATTTCATTATAAAACAAATTTGTAAACATTAGCTTTTTAAGTTTTTGATACCTTATTATTAGCCATCACTAAACTCAAAATTAGGATGTATTATATATATATATATATCAACATTTTGCCACTTTTTTTTTTAGTGGGTTTTGATTTTGAACCATAAATGACATGTAGGGATTTGAAAAAAAATGATTTTAATGATTAAGTGGGGTGGGTTAGAGTGAACAATCAAAATATACTGTCAACAATTCTTTTTAACATTAGGGTTTCTTTTTTTGTAATGTCCATAAATACGCATAAATTATCCAAATTCATGATGTTTGGTCTGGTTTTGGTAAGAGTTTCGAGGGACCATGCTTCAGACACTTGGTCCAAAAAATGAAGCCAATTGGTACCATGCAAGTACTAAAGAATAGTCTATTTTACACTATTTCTGATCATCTTTAATCACTCATACAGTTTCTTATGAGAGAGAAAAAGAATGAAAGAAAAATAAAATAAGAAAGAAAGAAAGAAAGATCAAGAATTTACTAAACTTAGATTATATTAATCTGAATCTTATAATCATATACAAATTAATGATTTAATTTACCAAAAGTTTTCCTAGTACTACATGTTGTTTTTCTGTTGTGGGGAAGATAAGAGAGAGGTGGAGAAATGGGGGTTTTGGTTAACCAATGTGTTTGGTGTGATTGGTACCTTATATGTTTATTAATTGATCGTACGATCTAATATTAATTTAATTAACCTTTTCTTATATTAAATATAAGGTTTTAAAGTTAATTAAACATTGATTATTATGTATGTTGGTGTCGAGTCACCTTTATCTCTCTGTATATTTTTAAAAATACTGAAAATATTAGATAATGTAGGAGGTTATGTATGGTTTGTTTAAAAGTTTTGTTTTTATTTTATGAATTGTGCGTGTTTATGTCATGTTCATTTTTATTTGTTTAGTCCTTATTTTAATTAGATTTCATATATGAAATTTGATGATACGATTTCTTCATAAGTTTGTCATTATTGTTTGATTTATTATTATTTTTTTATCATAAAATGGATATATTTCTCAATATATTTAAATAAATATTATGTTTTTTTCGTTTAATATATATTGCAAGAATGCATTTTATTGATATGCCATGTTTCTACTCCCTACCAAAACTACCTTGGAAAGTCATTGGCACAATTATTATAATGGTATAAAAATTAATTTTGTAATATTGAATATTAACCATATATTAATGATGATTAAAAGCATCCACTCTTAAAAAAAGAGCACAATTAAAAGTATCATACAAATACTAATTTGAGATGACATTAAATACAATTTAGTATTACTATAACAAAAAAACTTCGTTAAACACATTTCGCAATTTTGATATTTCACGGTATATTCAAACTTTATTTGGCTTATAGAAATACTTAGAATTGAAAACAATTCGTTTGTATCCTTATAAGTCGCTTTTATCTTTACACTTTTATATTTATAAAATTGAGCTCAAATTTATAAAATTGAGCTCTTTTTTTAACTCATAAAATTGTATTAAATCAATGTTTTTAAAATATAGTTAAAATTGTGTTCAATAACAAACCGATAAACTAATAAACTTGAAGAAATAAAATACTCAAAATCAAGTCTAACCCAATCGTAAAATATTCAAGCTTAACCACAAAATTAATTAGACAATAAAAAAAAATCAAAATTTAGCCATAAAAAGCTCAAACATAGCTAAAAGTATCCAATATGACTATAAAAGAATCAGTACTCACAACTAATCACAATTTTTCTTAAGAAATAAAGTAGAAAACTTAACTTTGAATCCTAGCTAAAAATATCCAACATGACTTAAAAGAACCAATACTCACTAAGTCACTCACATAAACTCGTTGCAATTTTATTATTTATTATTTATTGTTTATTATTATTATTATTTTTTTTTTGTAAAGAAGAAAACTTAACTAAGCGTGATTCTACCACTTATTCAAGTCGAGCGTTTGATTTTAAATTAATTCACTAACCTAAGTAAGAGGTTAAAGAAAAAGAAACAATTTTTTTTCCTAATATCATATTTCCTCACCAATTTATATATATATATATATAAAGCTACCACTTAAAATCAAACTTGTATGGGAATAAACTCAGTACCATATACTGTTACAATATTTTAGAAATATTAGTTTTGTATTAGATTTGGATATAATGTTTTTATCTGAAATGAACACATAATTTCTTATCCTTAAAATGTTGTGTTTGTTTCACTGATTTTTTTTTGTATGTGTCTACTTGTGCTTCAGCATGCAGGCCACGGTGGGGCGATTTCTAAGGCATACAAGAGAAACCCATCATCTTGAACGTCCTTTATCTCATCATCACATTCTACAAGCTGTTCAGGTTTGTCCTCATTTAAAAATACCTTTCTTGAACGTTCTCGATTGAAATATCAATATCTCAATTTTATAGAGATTTTAATAAAAATATTGATAAAATAGTATGTAGACAGTTAGTTGTTAAGAAAATCATAAAAATCTATAGCATTAGCCTTTGAGGGACAGTCTCGTTAGTAAGGGATTGGAGTTTTTGAGTCCGTATAGATGTCTTACGTTCAAGCTCTTGGGTAAACTTATTAAATAAAAACCTTCGATGTCCTTGACTTCGGGCGTTATAGCGGTCGTCCCCAAATATAGGGGAGCAAAAGCTCCGACACCCAGTTATAAAAAAGAATTTATATATTCACTGAATTTATTTAAATGAATAATAATATTATATATTTTTTTATTGATATATTTTTGTATTTTTTGAGTTCAACAATATAGAGGTAGAGATTCAAGTATTATACGACCTTTTGATTGAAGGTATATGTCTTAATCAGTTGAGTTATATTCAATTTGAATGATTTATAAATATTTAGAATTAGATTCATATAAATGTCATTTGGACTTGTTTAATAATCCTTTCGTTTTTTAAAATTAAGCTTATAAACACTACTTTCGCCTATGGATTTCTTTATTTAAAGGATTAAGTTTTTTTTTTTTTTCCTTTTTGCTTTTAATGTATAAATGAAGCATGAGGCTGCAAGTTTGTTGAAGGAGATTGAGTCACTTGAAGTTTCAAAGAGGTAGAATAAGCTGCTAATGTCTATAAATTTTTCATTGGTTTGACTTTGGCTGTCTGATTTTTGACACCAAATTTTGACTTGTAATTTACCAGGAAATTGTTGGGAGAAGGTTTGGAATCAAGCTCCTATGAAGAACTTCAACAAATAGAACAACAGATAGAAAGGAGCTTAGCCCATATTAGAGCTAGAAAGGTTCTCTAACTTATTTATAATTATTCATTCTATGTTATAAAATATAATAATCATTCATCGTTTTGACAGAAAATTTTCCATGTTTTTATAACTAATCAGCTTTTAAATGTTTGGTTCATAGGTAAAATTTGTATAATTTCAAATTTAGAGTGAAGAAGTTGAGTTTATGAGCCATTTAATTATCTCTATGGGACTTAAACTTTATATATACTAGCCTAGGTAATTTATAAGTCATTTGTTAATTTATTCTATGGACTTAACCAACTATATTAGCCTAGGTTATATAAAGTTTAATTATGTTCATAAATCCATTTTGATATGCTATGTTTAGTCTTTTCCAATCATAAATCTATTAATTAAGCACAATTATGCAAACTAAGTTCTATAACTTTTTTCTTTGTATAATCGGAATCATATGGTTTAAAAATTATAGGGTCGGATCAATTGTTCTGTAAGATTAGTTAAAGTGGTACTTTAATTTTTCTTCTAACTCTGTATTAGAAGCGTGAATTTTTGTTTGACTTGAATTAACTTTTTTTATTTTTCTGATTTTCAGCACGAGGTTTACAAGGAACAGATTGAACAACTAAAAGAAAAGGTTAGGAGAAAAGAACTTCAAAATTTCATACTTCCAATTAATTATGGATATTTTCTAGGCATGAACATTCTTTTTTCTTTTTTTCCCTCATTTCTTTTTTTTTTTAAACAAAAATACAGGAGAAGTATTTGACAGCTGAAAATGCAAAGCTAGGTAAAAAGGTGAGTTGTTATCATCTGTGATTACATTTGCTGGATTATTATTTTTCTAAACCAGAAATAAAAATCCAAACAGGTCTCTTATGATGAGCTACTATTTTCAGTACAACAGTTACATATGAATTCAACTATCGATTTTTAGGATAGAAATAGATATCTGGTATTTGAGTTATGTTCGGATTAACTTAAAGATTATCGATTTTTAGGATAGAAATAAATATCTTGTCTATTGAGTTATGTTCGGATTAATTTAAGGATTATAATACTGATGAAGTAAAATATATATATATATATATTGAAATGTGTTTTGTGATGCAGTACTTGATTCAACTTGAGCCTCAACAATCACCGACCCAATTAGAAAATGTTTCACCAAATCTTGAAACCAGCTCGATTTCTGATGTCGAAACGGGTTTGTTCATTGGACCGCCCAGGTCGAGATCTAAGTGACTGATCTTTTCTTTGCAAAATTGATTTGGTAGTAATCAAGGACTCGCCCACCCTCTTTTTTTCTTCTTGACAAATTGTATCATAATTAACTTCATAACAAATTTCAATTGGTTTTCATACTTTGTTTTCTTATTTGGCAGCTTGAATAATGATGTCAATAAGAAGAAGAGAGCAACAATGTGTGAGAGAAGAGAGAGAGGAAATTGGCTAGACTTTGTTTTCTCTTCAAAATTCTAAGCTTGAAAGTGTTTTAGTGTACAAAAAATTCCCCATATTCTCTCTTGCACATTTTCACATTTCATTTATAATAAGAAATTTATAGTCTATTCAATC

mRNA sequence

TGAAAACACATCTCACAATAACTAAACACATCTCTATTGATTATTTATTTATTTATTATTATTTTTTTTTGTTTGTTGATATTTATTTGCCTTTTTCTTCTTCTGGGGTTTTCAGATTCTTCCCCAATTTTTCCTTTTTTGCTCTCACAAACACTGCTTTAAGCTCTCTCAAGCTAGGGTTTGATTCCACCGATGAATTATGCCTTGTTTGGCTTCAAGATAAAAACAAGGGATTTTCTATTTTTCCATTTTTTTAAATTTTCCATTATTGTTTCTGTGTTTCTTTATGAAATCAATCACTTCCCAAATCTGCTAATTTTGGAAGGCTTTCAGTTTTTGGGTTGATACAAACAAGCCCTTAAGTTGAGATCTTTTTAAAAAAAAAAAAATTATTTCCCTTTTTGGCCCTCCCCGTCTCTTCTTTCACTCTGCTCTCTCAGAAACCAGGTCTGTTTGGTGCAATTTTTATTAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAGGTTGGAAAATGGTGAGAGGAAAAACTCAGATGAGGCGAATCGAGAACGCGACGAGTCGGCAAGTTACGTTTTCGAAACGGCGTAATGGGTTGCTGAAGAAGGCGTTTGAACTCTCCGTTCTTTGTGAAGCTGAAGTTGCTCTTATCATTTTCTCTTCTAGAGGGAAGCTTTATGAATTTGCTAGCTCAAGCATGCAGGCCACGGTGGGGCGATTTCTAAGGCATACAAGAGAAACCCATCATCTTGAACGTCCTTTATCTCATCATCACATTCTACAAGCTGTTCAGCATGAGGCTGCAAGTTTGTTGAAGGAGATTGAGTCACTTGAAGTTTCAAAGAGGAAATTGTTGGGAGAAGGTTTGGAATCAAGCTCCTATGAAGAACTTCAACAAATAGAACAACAGATAGAAAGGAGCTTAGCCCATATTAGAGCTAGAAAGCACGAGGTTTACAAGGAACAGATTGAACAACTAAAAGAAAAGGAGAAGTATTTGACAGCTGAAAATGCAAAGCTAGGTAAAAAGTACTTGATTCAACTTGAGCCTCAACAATCACCGACCCAATTAGAAAATGTTTCACCAAATCTTGAAACCAGCTCGATTTCTGATGTCGAAACGGGTTTGTTCATTGGACCGCCCAGGTCGAGATCTAAGTGACTGATCTTTTCTTTGCAAAATTGATTTGCTTGAATAATGATGTCAATAAGAAGAAGAGAGCAACAATGTGTGAGAGAAGAGAGAGAGGAAATTGGCTAGACTTTGTTTTCTCTTCAAAATTCTAAGCTTGAAAGTGTTTTAGTGTACAAAAAATTCCCCATATTCTCTCTTGCACATTTTCACATTTCATTTATAATAAGAAATTTATAGTCTATTCAATC

Coding sequence (CDS)

ATGGTGAGAGGAAAAACTCAGATGAGGCGAATCGAGAACGCGACGAGTCGGCAAGTTACGTTTTCGAAACGGCGTAATGGGTTGCTGAAGAAGGCGTTTGAACTCTCCGTTCTTTGTGAAGCTGAAGTTGCTCTTATCATTTTCTCTTCTAGAGGGAAGCTTTATGAATTTGCTAGCTCAAGCATGCAGGCCACGGTGGGGCGATTTCTAAGGCATACAAGAGAAACCCATCATCTTGAACGTCCTTTATCTCATCATCACATTCTACAAGCTGTTCAGCATGAGGCTGCAAGTTTGTTGAAGGAGATTGAGTCACTTGAAGTTTCAAAGAGGAAATTGTTGGGAGAAGGTTTGGAATCAAGCTCCTATGAAGAACTTCAACAAATAGAACAACAGATAGAAAGGAGCTTAGCCCATATTAGAGCTAGAAAGCACGAGGTTTACAAGGAACAGATTGAACAACTAAAAGAAAAGGAGAAGTATTTGACAGCTGAAAATGCAAAGCTAGGTAAAAAGTACTTGATTCAACTTGAGCCTCAACAATCACCGACCCAATTAGAAAATGTTTCACCAAATCTTGAAACCAGCTCGATTTCTGATGTCGAAACGGGTTTGTTCATTGGACCGCCCAGGTCGAGATCTAAGTGA

Protein sequence

MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASSSMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLESSSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQQSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK

Homology

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BLAST of Tan0003775 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.4e-57
Identity = 134/216 (62.04%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLC+AEV+LIIFS +GKLYEFASS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           +MQ T+ R+LRHT++     +P+S  + +Q +++EAA+++K+IE LE SKRKLLGEG+ +
Sbjct: 61  NMQDTIDRYLRHTKD-RVSTKPVSEEN-MQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKY-LIQLEP 180
            S EELQQIEQQ+E+S+  IRARK +V+KEQIEQLK+KEK L AEN KL +K+   + E 
Sbjct: 121 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEV 180

Query: 181 QQSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
             +  Q      + E+S  S+VET LFIG P S  K
Sbjct: 181 WSNKNQESTGRGDEESSPSSEVETQLFIGLPCSSRK 214

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BLAST of Tan0003775 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.5e-50
Identity = 116/213 (54.46%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVAL+IFS R KLYEF+SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           S+ AT+ R+ R  +E  +  +    +   Q  + E + L K+IE LE+SKRKLLGEG+++
Sbjct: 61  SIAATIERYQRRIKEIGNNHK---RNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDA 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
            S EELQQ+E Q++RSL+ IRA+K+++ +E+IE+LK +E+ L  EN  L +K+L      
Sbjct: 121 CSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTAT 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSR 214
            + +Q    S  +      +VETGLFIGPP +R
Sbjct: 181 IASSQSTLSSSEVNIDDNMEVETGLFIGPPETR 210

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BLAST of Tan0003775 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.4e-46
Identity = 113/214 (52.80%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLC+A+++LIIFS RG+LYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
            MQ T+ R+ ++T++ H      S  H LQ ++ EA+ ++ +IE LE  KRKLLG+G+ S
Sbjct: 61  DMQKTIERYRKYTKD-HETSNHDSQIH-LQQLKQEASHMITKIELLEFHKRKLLGQGIAS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQ---- 180
            S EELQ+I+ Q++RSL  +R RK +++KEQ+E+LK KEK L  EN KL +K +I     
Sbjct: 121 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRG 180

Query: 181 LEPQQSPTQLENVSPNLETSSISDVETGLFIGPP 211
               Q   + + +  NLE      VET LFIG P
Sbjct: 181 SSTDQQQEKYKVIDLNLE------VETDLFIGLP 206

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BLAST of Tan0003775 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-45
Identity = 117/222 (52.70%), Postives = 155/222 (69.82%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEF-AS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVALIIFS RGKLYEF +S
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  SSMQATVGRFLRHTRE--THHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEG 120
           SS+  TV R+ +  ++  ++H     S     Q  + E   L ++IE LE+S RK++GEG
Sbjct: 61  SSIPKTVERYQKRIQDLGSNHKRNDNS-----QQSKDETYGLARKIEHLEISTRKMMGEG 120

Query: 121 LESSSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQL 180
           L++SS EELQQ+E Q++RSL  IRA+K+++ +E+ E+LKEKE+ L AEN     K L++ 
Sbjct: 121 LDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAEN-----KMLMEK 180

Query: 181 EPQQSPTQLENVSPNLETSSIS------DVETGLFIGPPRSR 214
              Q    +  +S +  TS +       +V T LFIGPP +R
Sbjct: 181 CEMQGRGIIGRISSSSSTSELDIDDNEMEVVTDLFIGPPETR 212

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BLAST of Tan0003775 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 118/220 (53.64%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQM+RIEN TSRQVTFSKRRNGLLKKAFELSVLC+AEVALI+FS RGKLYEFAS+
Sbjct: 1   MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           S Q T+ R+  +T+E    +   +    ++ V+ +A  L K++E+LE  KRKLLGE L+ 
Sbjct: 61  STQKTIERYRTYTKENIGNK---TVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
            S EEL  +E ++ERSL  IR RK ++ +EQ+ +L+EKE  L  +N +L +K   Q  P 
Sbjct: 121 CSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQ-PPL 180

Query: 181 QSPTQL----ENVSPNLETSSIS-DVETGLFIG-PPRSRS 215
            +P  +    EN   N+ T++ + DVET LFIG P RSRS
Sbjct: 181 SAPLTVRAEDENPDRNINTTNDNMDVETELFIGLPGRSRS 216

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BLAST of Tan0003775 vs. NCBI nr
Match: XP_004133895.1 (MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical protein Csa_010330 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.6e-85
Identity = 181/220 (82.27%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLC+AE+ALIIFSSRGKLYEF+SS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRFLRHTR--ETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGL 120
           SMQATVGR+LRHTR  ++HHL++PL H H LQAVQ+EAASLLKEIES+EVSKRKLLGE L
Sbjct: 61  SMQATVGRYLRHTRSDQSHHLDQPLPHQHDLQAVQNEAASLLKEIESVEVSKRKLLGESL 120

Query: 121 ESSSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLE 180
            +SSYEELQQ+EQQ+ERSL+HIRARKHEVY+EQIEQLKEKEK+LTAENAKL KKY ++ E
Sbjct: 121 GTSSYEELQQLEQQLERSLSHIRARKHEVYREQIEQLKEKEKHLTAENAKLAKKYDVEEE 180

Query: 181 PQQSPTQLE--NVSPNL-ETSSISDVETGLFIGPPRSRSK 216
            QQSPTQ++   VSPN  E+SSISDVET LFIGPP+SRSK
Sbjct: 181 RQQSPTQIQLAEVSPNYGESSSISDVETDLFIGPPKSRSK 220

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BLAST of Tan0003775 vs. NCBI nr
Match: KAG7028644.1 (MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.2 bits (822), Expect = 6.6e-84
Identity = 180/215 (83.72%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSS GKL EFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATV RF RHTRETHHLER L HHH       EAA+LLKEIESLEVSKRKLLG+GL S
Sbjct: 61  SMQATVERFQRHTRETHHLERSLPHHH---DQADEAANLLKEIESLEVSKRKLLGQGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SSYEELQQIEQQ+ RSLAH+RA KHE YKEQI+QLKEKEKYL AEN KL KKYL+QLEP+
Sbjct: 121 SSYEELQQIEQQLHRSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKYLVQLEPR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
           QS TQ+  VSPNLETSS  DVET LFIGPP+SRSK
Sbjct: 181 QSLTQVGEVSPNLETSSTFDVETELFIGPPKSRSK 212

[Close]

BLAST of Tan0003775 vs. NCBI nr
Match: KAG6597179.1 (MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 179/215 (83.26%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSS GKL EFASS
Sbjct: 35  MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFASS 94

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATV RF RHTRETHHLER L HHH       EAA+LLKEIESLEVSKRKL+G+GL S
Sbjct: 95  SMQATVERFQRHTRETHHLERSLPHHH---DQADEAANLLKEIESLEVSKRKLMGQGLGS 154

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SSYEELQQIEQQ+ RSLAH+RA KHE YKEQI+QLKEKEKYL AEN KL KKYL+QLEP+
Sbjct: 155 SSYEELQQIEQQLHRSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKYLVQLEPR 214

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
           QS TQ+  VSPNLETSS  DVET LFIGPP+SRSK
Sbjct: 215 QSLTQVGEVSPNLETSSTFDVETELFIGPPKSRSK 246

[Close]

BLAST of Tan0003775 vs. NCBI nr
Match: XP_022943627.1 (MADS-box protein SOC1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 318.2 bits (814), Expect = 5.6e-83
Identity = 178/215 (82.79%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSS GKL EFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSAGKLCEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATV RF RHTRETHHLER L HHH       EAA+LLKEIESLEVSKRKL G+GL S
Sbjct: 61  SMQATVERFQRHTRETHHLERSLPHHH---DQADEAANLLKEIESLEVSKRKLFGQGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SSYEELQQIEQQ+ RSLAH+RA KHE YKEQI+QLKEKEKYL AEN KL KKYL+QLEP+
Sbjct: 121 SSYEELQQIEQQLHRSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKYLVQLEPR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
           +S TQ+  VSPNLETSS  DVET LFIGPP+SRSK
Sbjct: 181 RSLTQVGEVSPNLETSSTFDVETELFIGPPKSRSK 212

[Close]

BLAST of Tan0003775 vs. NCBI nr
Match: XP_022147398.1 (MADS-box protein SOC1-like isoform X1 [Momordica charantia])

HSP 1 Score: 315.1 bits (806), Expect = 4.7e-82
Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVALII+SSRGKLYEFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATVGR+LRHT+ETHHL+ PL   H LQ VQHEAA+L+KEIESLEVSKRKLLGEGL S
Sbjct: 61  SMQATVGRYLRHTKETHHLQ-PLVRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SS EEL QIEQQ+ERSL ++RARKH+VY+EQIEQL EKEK+L AENAKLG+KY +QL  +
Sbjct: 121 SSCEELHQIEQQLERSLTNVRARKHQVYREQIEQLGEKEKFLAAENAKLGEKYCVQLHHR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRS 215
           QSP +   VSP+ E+SSISDVET LFIGPP SRS
Sbjct: 181 QSPNEQGEVSPHPESSSISDVETELFIGPPESRS 213

[Close]

BLAST of Tan0003775 vs. ExPASy TrEMBL
Match: A0A6J1FTJ4 (MADS-box protein SOC1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448338 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.7e-83
Identity = 178/215 (82.79%), Postives = 188/215 (87.44%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSS GKL EFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSAGKLCEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATV RF RHTRETHHLER L HHH       EAA+LLKEIESLEVSKRKL G+GL S
Sbjct: 61  SMQATVERFQRHTRETHHLERSLPHHH---DQADEAANLLKEIESLEVSKRKLFGQGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SSYEELQQIEQQ+ RSLAH+RA KHE YKEQI+QLKEKEKYL AEN KL KKYL+QLEP+
Sbjct: 121 SSYEELQQIEQQLHRSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKYLVQLEPR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
           +S TQ+  VSPNLETSS  DVET LFIGPP+SRSK
Sbjct: 181 RSLTQVGEVSPNLETSSTFDVETELFIGPPKSRSK 212

[Close]

BLAST of Tan0003775 vs. ExPASy TrEMBL
Match: A0A6J1D177 (MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016338 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.3e-82
Identity = 173/214 (80.84%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVALII+SSRGKLYEFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATVGR+LRHT+ETHHL+ PL   H LQ VQHEAA+L+KEIESLEVSKRKLLGEGL S
Sbjct: 61  SMQATVGRYLRHTKETHHLQ-PLVRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SS EEL QIEQQ+ERSL ++RARKH+VY+EQIEQL EKEK+L AENAKLG+KY +QL  +
Sbjct: 121 SSCEELHQIEQQLERSLTNVRARKHQVYREQIEQLGEKEKFLAAENAKLGEKYCVQLHHR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRS 215
           QSP +   VSP+ E+SSISDVET LFIGPP SRS
Sbjct: 181 QSPNEQGEVSPHPESSSISDVETELFIGPPESRS 213

[Close]

BLAST of Tan0003775 vs. ExPASy TrEMBL
Match: A0A1S4DSH6 (MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.3e-81
Identity = 175/221 (79.19%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLC+AE+ALIIFSSRGKLYEF+SS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLYEFSSS 60

Query: 61  SMQATVGRFLRHTR--ETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGL 120
           SMQATV R+LRHTR  ++HHL++  +H   LQ+VQ EAASLLKEIES+EV+KRKLLGEGL
Sbjct: 61  SMQATVERYLRHTRSNQSHHLDQLSAHQPDLQSVQSEAASLLKEIESVEVAKRKLLGEGL 120

Query: 121 ESSSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLE 180
             SSYEELQQ+EQQ+ERSL+HIRARK+EVY+EQIEQLKEKEK+L AENAKL KKY ++ E
Sbjct: 121 GKSSYEELQQLEQQLERSLSHIRARKNEVYREQIEQLKEKEKHLIAENAKLAKKYFVEEE 180

Query: 181 PQQSPT---QLENVSPN-LETSSISDVETGLFIGPPRSRSK 216
           PQQSPT   Q+  VSPN  E+SSISDVET LFIGPP+SRSK
Sbjct: 181 PQQSPTDQIQIAEVSPNYAESSSISDVETDLFIGPPKSRSK 221

[Close]

BLAST of Tan0003775 vs. ExPASy TrEMBL
Match: A0A6J1IGL8 (MADS-box protein SOC1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472723 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.6e-80
Identity = 176/215 (81.86%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENAT+RQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSS GKL EFASS
Sbjct: 1   MVRGKTQMRRIENATNRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSTGKLCEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATV RF RHTR THHLER L HHH  QA Q  AA+LLKEIESLE SKRKLLG+GL S
Sbjct: 61  SMQATVERFQRHTRVTHHLERSLPHHHD-QADQ--AANLLKEIESLEDSKRKLLGQGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SSYEELQQIEQQ++ SLAH+RA KHE YKEQI+QLKEKEKYL AEN KL KKYL+QLEP+
Sbjct: 121 SSYEELQQIEQQLQSSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKYLVQLEPR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
           QS TQ+  VSP LETSS  DVET LFIGPP+ RSK
Sbjct: 181 QSLTQVREVSPYLETSSTFDVETDLFIGPPKPRSK 212

[Close]

BLAST of Tan0003775 vs. ExPASy TrEMBL
Match: A0A6J1D0W1 (MADS-box protein SOC1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016338 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 172/214 (80.37%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVALII+SSRGKLYEFASS
Sbjct: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           SMQATVGR+LRHT+ETHHL+ PL   H LQ VQHEAA+L+KEIESLEVSKRKLLGEGL S
Sbjct: 61  SMQATVGRYLRHTKETHHLQ-PLVRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
           SS EEL QIEQQ+ERSL ++RARK  VY+EQIEQL EKEK+L AENAKLG+KY +QL  +
Sbjct: 121 SSCEELHQIEQQLERSLTNVRARK--VYREQIEQLGEKEKFLAAENAKLGEKYCVQLHHR 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSRS 215
           QSP +   VSP+ E+SSISDVET LFIGPP SRS
Sbjct: 181 QSPNEQGEVSPHPESSSISDVETELFIGPPESRS 211

[Close]

BLAST of Tan0003775 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 134/216 (62.04%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLC+AEV+LIIFS +GKLYEFASS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           +MQ T+ R+LRHT++     +P+S  + +Q +++EAA+++K+IE LE SKRKLLGEG+ +
Sbjct: 61  NMQDTIDRYLRHTKD-RVSTKPVSEEN-MQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKY-LIQLEP 180
            S EELQQIEQQ+E+S+  IRARK +V+KEQIEQLK+KEK L AEN KL +K+   + E 
Sbjct: 121 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEV 180

Query: 181 QQSPTQLENVSPNLETSSISDVETGLFIGPPRSRSK 216
             +  Q      + E+S  S+VET LFIG P S  K
Sbjct: 181 WSNKNQESTGRGDEESSPSSEVETQLFIGLPCSSRK 214

[Close]

BLAST of Tan0003775 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-51
Identity = 116/213 (54.46%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLC+AEVAL+IFS R KLYEF+SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
           S+ AT+ R+ R  +E  +  +    +   Q  + E + L K+IE LE+SKRKLLGEG+++
Sbjct: 61  SIAATIERYQRRIKEIGNNHK---RNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDA 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQLEPQ 180
            S EELQQ+E Q++RSL+ IRA+K+++ +E+IE+LK +E+ L  EN  L +K+L      
Sbjct: 121 CSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTAT 180

Query: 181 QSPTQLENVSPNLETSSISDVETGLFIGPPRSR 214
            + +Q    S  +      +VETGLFIGPP +R
Sbjct: 181 IASSQSTLSSSEVNIDDNMEVETGLFIGPPETR 210

[Close]

BLAST of Tan0003775 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-47
Identity = 113/214 (52.80%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLC+A+++LIIFS RG+LYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
            MQ T+ R+ ++T++ H      S  H LQ ++ EA+ ++ +IE LE  KRKLLG+G+ S
Sbjct: 61  DMQKTIERYRKYTKD-HETSNHDSQIH-LQQLKQEASHMITKIELLEFHKRKLLGQGIAS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQ---- 180
            S EELQ+I+ Q++RSL  +R RK +++KEQ+E+LK KEK L  EN KL +K +I     
Sbjct: 121 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRG 180

Query: 181 LEPQQSPTQLENVSPNLETSSISDVETGLFIGPP 211
               Q   + + +  NLE      VET LFIG P
Sbjct: 181 SSTDQQQEKYKVIDLNLE------VETDLFIGLP 206

[Close]

BLAST of Tan0003775 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-47
Identity = 113/214 (52.80%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLC+A+++LIIFS RG+LYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
            MQ T+ R+ ++T++ H      S  H LQ ++ EA+ ++ +IE LE  KRKLLG+G+ S
Sbjct: 61  DMQKTIERYRKYTKD-HETSNHDSQIH-LQQLKQEASHMITKIELLEFHKRKLLGQGIAS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQ---- 180
            S EELQ+I+ Q++RSL  +R RK +++KEQ+E+LK KEK L  EN KL +K +I     
Sbjct: 121 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRG 180

Query: 181 LEPQQSPTQLENVSPNLETSSISDVETGLFIGPP 211
               Q   + + +  NLE      VET LFIG P
Sbjct: 181 SSTDQQQEKYKVIDLNLE------VETDLFIGLP 206

[Close]

BLAST of Tan0003775 vs. TAIR 10
Match: AT5G62165.3 (AGAMOUS-like 42 )

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-47
Identity = 113/214 (52.80%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSRGKLYEFASS 60
           MVRGK +M++IENATSRQVTFSKRRNGLLKKA+ELSVLC+A+++LIIFS RG+LYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMQATVGRFLRHTRETHHLERPLSHHHILQAVQHEAASLLKEIESLEVSKRKLLGEGLES 120
            MQ T+ R+ ++T++ H      S  H LQ ++ EA+ ++ +IE LE  KRKLLG+G+ S
Sbjct: 61  DMQKTIERYRKYTKD-HETSNHDSQIH-LQQLKQEASHMITKIELLEFHKRKLLGQGIAS 120

Query: 121 SSYEELQQIEQQIERSLAHIRARKHEVYKEQIEQLKEKEKYLTAENAKLGKKYLIQ---- 180
            S EELQ+I+ Q++RSL  +R RK +++KEQ+E+LK KEK L  EN KL +K +I     
Sbjct: 121 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQKNVINPWRG 180

Query: 181 LEPQQSPTQLENVSPNLETSSISDVETGLFIGPP 211
               Q   + + +  NLE      VET LFIG P
Sbjct: 181 SSTDQQQEKYKVIDLNLE------VETDLFIGLP 206

The following BLAST results are available for this feature:

BLAST of Tan0003775 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64645	9.4e-57	62.04	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]
O82743	8.5e-50	54.46	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=...	[more]
Q9FIS1	7.4e-46	52.80	MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1	[more]
Q38838	3.7e-45	52.70	Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=...	[more]
Q9XJ60	1.2e-43	53.64	MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of Tan0003775 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133895.1	4.6e-85	82.27	MADS-box protein SOC1 isoform X1 [Cucumis sativus] >KGN56596.2 hypothetical prot...	[more]
KAG7028644.1	6.6e-84	83.72	MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597179.1	1.1e-83	83.26	MADS-box protein SOC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943627.1	5.6e-83	82.79	MADS-box protein SOC1-like isoform X1 [Cucurbita moschata]	[more]
XP_022147398.1	4.7e-82	80.84	MADS-box protein SOC1-like isoform X1 [Momordica charantia]	[more]

BLAST of Tan0003775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTJ4	2.7e-83	82.79	MADS-box protein SOC1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1D177	2.3e-82	80.84	MADS-box protein SOC1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A1S4DSH6	4.3e-81	79.19	MADS-box protein SOC1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483321 PE...	[more]
A0A6J1IGL8	1.6e-80	81.86	MADS-box protein SOC1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147272...	[more]
A0A6J1D0W1	6.3e-80	80.37	MADS-box protein SOC1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Tan0003775 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45660.1	6.6e-58	62.04	AGAMOUS-like 20	[more]
AT4G22950.1	6.0e-51	54.46	AGAMOUS-like 19	[more]
AT5G62165.1	5.3e-47	52.80	AGAMOUS-like 42	[more]
AT5G62165.2	5.3e-47	52.80	AGAMOUS-like 42	[more]
AT5G62165.3	5.3e-47	52.80	AGAMOUS-like 42	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..172
None	No IPR available	COILS	Coil	Coil	coord: 89..116
None	No IPR available	COILS	Coil	Coil	coord: 123..143
None	No IPR available	PANTHER	PTHR11945:SF341	MADS-BOX PROTEIN SOC1	coord: 1..173
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..173
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 63.49 coord: 23..38 score: 83.07 coord: 38..59 score: 65.97
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.4E-39 score: 147.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.9E-25 score: 88.2
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.622824
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..95 e-value: 2.2E-28 score: 100.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 3..78
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 84..173 e-value: 1.3E-25 score: 89.4
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 89..178 score: 14.612719
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 3..77 e-value: 5.65411E-40 score: 128.439

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003775.1	Tan0003775.1	mRNA
Tan0003775.2	Tan0003775.2	mRNA
Tan0003775.3	Tan0003775.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding