Tan0003768 (gene) Snake gourd v1

Overview


Name	Tan0003768
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ubiquitin family protein
Location	LG11: 7036357 .. 7039223 (+)
RNA-Seq Expression	Tan0003768
Synteny	Tan0003768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGTCAACGCCATTGACCCCGAGTTTGCAAGGCGGTAGAAATATATTATAAAATATGAACGAGTACGAAAATTCTTTCTTGATTGAGACGACCTAGGGTTTTGTTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAATGAAGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACAAGAGCCGAGAAGATTCGGATTCAAAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTATGAAATCCACGACGGCATGGGCCTTGAACTCTACTACAATTAGGTCATCCTCTCATCACTCTGGATATTTTATTTTTGTATAGGATGAATTTTAGCGGCTCTGGTTAACTTTCTTGGATTTATGATGGAATTTTCCCTAGAACTTTGCGTAGAAGATTATGATTTTTGAAGTTTTAGTGTTCGAGTCCTACTTGGTCATAAAATTAACGATCCCAACCATGAGTTTTGAACTGGATTAAGAGAGAAAGAATGGTCTTTGTTTACTATTTGATCGCATAATCTTGTTTGTTAGCTTTTAGGGCGACGTTTTGTTGTGGTAATTTAACTCTGGTTGTATAGAGTAGAGATATGAAAATAATAGAGAACCTAAGCAATTTTTGTAATAATCGGTGGCGTACGCTAGAGATTTTATTATCTTTATCTTGATAACTTTCCCCGTACTTCCATTGCCCATTACTGTTAAATGCTAATTAAAGTCTGATGACGACAGAGTGTAATGGAGAAAGACCACTTTAAATGTCAAAAGTACATATCAGGCAATTTTTTTGGTGGGAGGAGTATTAATTTGTGATTGATTAGGTTTTGAGGGAAATAATAGAATTTTTAGAGGGTTGGAGAGAAACATAGTGTGGTCTGGTCCACCACCAGGTTCCATGTTTCTCTTTGGACGTCGAATTCTAATATCTTTTGTAATTATCCACTTGGTATTATTTTATTTGATCGGAACTCCTTTTTGTAGTAAGGTTCTCTCTCTGGACTTTGTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGTTTGGCTTCTTAGAATTCAAGGACACAGTTGTACAATCTATAGAACAGATCCTGTTCAAATATGGTCGTTCCAAAGCTCAGTTTCTTATAAAATGAATTGTGATTGACTGGGCATGCTTTAGCTGTTGCAAATTAGATATAAAAGAAATTGGTGAAAACAAAGGTGACAGAATCCAGATATATTTTGTGTTGTAGTGCTGCTTTCATTTCTCTATTTGGAGAATGGTTCATTCTAGGAAGTCCTTCGTAGGGTCCCCAAAGTCAAGAAGGCTAAGCGGCAAGCTTTGTTCTTGCCTGAGGAACTTTCTTAATGCCCATCACTTTGCTAAAGCAAGAAATACTTCTGGAAAAATAATCTATCGGCTTCATCCACCTAGTGGGCTGTTGCTGAATGTAAGTTGCAATTTATTCTGGTCTTGTTCCAGTTCTTTCTTAACAATCTTAAATCTTTTAAAGATGAAAAGTATGGATTGACTAATGTGTCTTATAAAACCATGTTGGATCAACTATATGAGTCATCCATTGTCAGCGATCAATAATCTAATGGATCTTGCAAAACTGTTTGTATCCTTGTATCTTACCGATGAAATTCGTTTACCTTCGTATCTTTCCGTATGGTGGAGTTATTTGTAAGCTTGCTCCTTGCAAGCTTTAATCAACAATTTGCTTTTACATCCACCGATTAGGTCATTTTGCTCAAGTCATCCTGTCTCTATACTTTCGAGATTTGCCATTGTGCTGGTATAACTTAATAGTTAATATCCAATTATGATGCCATCTTTGCCTAAAACCATTTATCTCCAGGGAAATACCAGAAAGTAGGACGAATTCTCTGCCATATGAACCAGATGACAATCTTCTGTGAGCCACATACGAACACTGCCAGAGGGTATATTTTGCTGGCAACTATTTTGTGCCAAATGGAAACAAGTGGCCAAGTGGGTGGGGGAGTTTTTCCAAAGGCCTCAAACGTTGATTTACCGTTAGAAACTAGAATTTGCTGTTCGTTACTTTCTCCTTCTCTCTGAATTGAAGACAACTTCACCCCTTCAAATGGCTAAACTGGTGAGGTGCCAGATTTACAACAAATAGAGGAATCCTCGTCAAAATTTTACTTTCAAATCTCTTTAAAAAAGAATTAAAACACCCTAAACTAGTGGGACACTAGGACTGGCCCTCTGCAACTCTAGGAAGAAAGAAAAATCCTTAAAGAGGTGAAGTTTTTCTTTTGGACTCTTCATTTAGGGAGCCTTACTCCAAGTGGACGGGTGTGTTCTCTTGTAGTTAAGGAGACAACTATATTTGTTCCTCAATCGTCAATTTTTTTACCAAGGATGCAGTCGAATATTGCATTAAATTCCCTATTTTAGCATTATAAAGACATTTTATTGCATGTATCTTAGCTTAAAATACTACGCCTGGTTGATGGTTGCTTTTCATTTCGAAAAGGTTACCTTTTACATACATGGTTGCTGATTATATCTGTTTTTGTTCAGTTAATGCAGGCATGGAAAGCCATACGGTGGGCTTTTGCTATCACTCTTTCATTAGCTCAATGTTGTCGTTTGGGGCTGCCTGTTTGATTTGTAACATAGGAAGCATATATTGATGACTGTTTCAGAATAAAACTCGAAAGTTTGGGACTTCATGTAATACACGATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTTTATTATCTTTATCCTCCAAGGCCTCGTTTGGTTATGTGTTTTCATTGA

mRNA sequence

CGAGTCAACGCCATTGACCCCGAGTTTGCAAGGCGGTAGAAATATATTATAAAATATGAACGAGTACGAAAATTCTTTCTTGATTGAGACGACCTAGGGTTTTGTTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAATGAAGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACAAGAGCCGAGAAGATTCGGATTCAAAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTATGAAATCCACGACGGCATGGGCCTTGAACTCTACTACAATTAGTTAATGCAGGCATGGAAAGCCATACGGTGGGCTTTTGCTATCACTCTTTCATTAGCTCAATGTTGTCGTTTGGGGCTGCCTGTTTGATTTGTAACATAGGAAGCATATATTGATGACTGTTTCAGAATAAAACTCGAAAGTTTGGGACTTCATGTAATACACGATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTTTATTATCTTTATCCTCCAAGGCCTCGTTTGGTTATGTGTTTTCATTGA

Coding sequence (CDS)

ATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAATGAAGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACAAGAGCCGAGAAGATTCGGATTCAAAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTATGAAATCCACGACGGCATGGGCCTTGAACTCTACTACAATTAG

Protein sequence

MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN

Homology

[Close]

BLAST of Tan0003768 vs. ExPASy Swiss-Prot
Match: Q9FGZ9 (Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.0e-36
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. ExPASy Swiss-Prot
Match: Q3T0Z3 (Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of Tan0003768 vs. ExPASy Swiss-Prot
Match: Q9BZL1 (Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of Tan0003768 vs. ExPASy Swiss-Prot
Match: Q6EGX7 (Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of Tan0003768 vs. ExPASy Swiss-Prot
Match: Q9EPV8 (Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of Tan0003768 vs. NCBI nr
Match: CAA7058928.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 521 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 580

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 581 EIHDGMGLELYYN 593

[Close]

BLAST of Tan0003768 vs. NCBI nr
Match: XP_002863802.1 (ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata] >XP_006281412.1 ubiquitin-like protein 5 [Capsella rubella] >XP_008456484.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462656.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462662.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462668.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_009108927.1 ubiquitin-like protein 5 [Brassica rapa] >XP_013618092.1 PREDICTED: ubiquitin-like protein 5 [Brassica oleracea var. oleracea] >XP_013729902.1 ubiquitin-like protein 5 [Brassica napus] >XP_013751522.1 ubiquitin-like protein 5 [Brassica napus] >XP_016902862.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902865.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902868.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902869.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_018434387.1 PREDICTED: ubiquitin-like protein 5 [Raphanus sativus] >XP_019088200.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_019095922.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_019097853.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_022134421.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022134422.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152891.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152892.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152893.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022937457.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022937458.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022939919.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022939920.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022969698.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022969699.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022993515.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022993517.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_023537479.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023537480.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023537481.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023549555.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023549556.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_038886602.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894431.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894432.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894433.1 ubiquitin-like protein 5 [Benincasa hispida] >KAA0036470.1 hypothetical protein E6C27_scaffold147G00390 [Cucumis melo var. makuwa] >KAF3532776.1 hypothetical protein DY000_02041958 [Brassica cretica] >KAF8086028.1 hypothetical protein N665_0639s0036 [Sinapis alba] >KAG2247010.1 hypothetical protein Bca52824_086638 [Brassica carinata] >KAG5415528.1 hypothetical protein IGI04_003095 [Brassica rapa subsp. trilocularis] >KAG7016291.1 Ubiquitin-like protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7533131.1 Ubiquitin domain [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7536852.1 Ubiquitin domain [Arabidopsis suecica] >CAE6225876.1 unnamed protein product [Arabidopsis arenosa] >VDD51759.1 unnamed protein product [Brassica oleracea] >VVB08313.1 unnamed protein product [Arabis nemorensis])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. NCBI nr
Match: KAG5239708.1 (ubiquitin protein [Salix suchowensis])

HSP 1 Score: 151.8 bits (382), Expect = 2.4e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          M+EVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MLEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. NCBI nr
Match: KCW51380.1 (hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis])

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 61  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 120

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 121 EIHDGMGLELYYN 133

[Close]

BLAST of Tan0003768 vs. NCBI nr
Match: KAG6520004.1 (hypothetical protein ZIOFF_017033 [Zingiber officinale])

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 383 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 442

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 443 EIHDGMGLELYYN 455

[Close]

BLAST of Tan0003768 vs. ExPASy TrEMBL
Match: A0A6J1I1R2 (ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111468647 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. ExPASy TrEMBL
Match: A0A398AR32 (Ubiquitin-like domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA01T03406Z PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. ExPASy TrEMBL
Match: A0A1S3C3F9 (ubiquitin-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103496425 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. ExPASy TrEMBL
Match: A0A1J3HSG3 (Ubiquitin-like protein 5 OS=Noccaea caerulescens OX=107243 GN=LC_TR1202_c0_g1_i1_g.3200 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. ExPASy TrEMBL
Match: A0A6J1BXR9 (ubiquitin-like protein 5 OS=Momordica charantia OX=3673 GN=LOC111006674 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. TAIR 10
Match: AT5G42300.1 (ubiquitin-like protein 5 )

HSP 1 Score: 151.4 bits (381), Expect = 2.9e-37
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of Tan0003768 vs. TAIR 10
Match: AT3G45180.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-36
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHIPLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

The following BLAST results are available for this feature:

BLAST of Tan0003768 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGZ9	4.0e-36	98.63	Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1	[more]
Q3T0Z3	4.0e-28	80.56	Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1	[more]
Q9BZL1	4.0e-28	80.56	Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1	[more]
Q6EGX7	4.0e-28	80.56	Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1	[more]
Q9EPV8	4.0e-28	80.56	Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1	[more]

BLAST of Tan0003768 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA7058928.1	1.4e-33	100.00	unnamed protein product [Microthlaspi erraticum]	[more]
XP_002863802.1	1.4e-33	100.00	ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata] >XP_006281412.1 ubiq...	[more]
KAG5239708.1	2.4e-33	98.63	ubiquitin protein [Salix suchowensis]	[more]
KCW51380.1	3.1e-33	98.63	hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis]	[more]
KAG6520004.1	3.1e-33	98.63	hypothetical protein ZIOFF_017033 [Zingiber officinale]	[more]

BLAST of Tan0003768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1R2	6.7e-34	100.00	ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111468647 PE=4 SV=1	[more]
A0A398AR32	6.7e-34	100.00	Ubiquitin-like domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA0...	[more]
A0A1S3C3F9	6.7e-34	100.00	ubiquitin-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103496425 PE=4 SV=1	[more]
A0A1J3HSG3	6.7e-34	100.00	Ubiquitin-like protein 5 OS=Noccaea caerulescens OX=107243 GN=LC_TR1202_c0_g1_i1...	[more]
A0A6J1BXR9	6.7e-34	100.00	ubiquitin-like protein 5 OS=Momordica charantia OX=3673 GN=LOC111006674 PE=4 SV=...	[more]

BLAST of Tan0003768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42300.1	2.9e-37	98.63	ubiquitin-like protein 5	[more]
AT3G45180.1	7.1e-36	95.89	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 11..70 e-value: 3.0E-7 score: 30.1
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 2..73 score: 10.266311
None	No IPR available	GENE3D	3.10.20.90		coord: 1..73 e-value: 6.4E-30 score: 104.9
None	No IPR available	PANTHER	PTHR13042:SF13	UBIQUITIN-LIKE PROTEIN 5	coord: 1..73
None	No IPR available	CDD	cd01791	Ubl_UBL5	coord: 1..71 e-value: 9.09215E-48 score: 143.613
IPR039732	Ubiquitin-like modifier Hub1/Ubl5	PANTHER	PTHR13042	UBIQUITIN-LIKE PROTEIN 5	coord: 1..73
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003768.2	Tan0003768.2	mRNA
Tan0003768.3	Tan0003768.3	mRNA
Tan0003768.1	Tan0003768.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031386	protein tag