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Tan0003671 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATTCCCTTCGTCACAATACTCTTTACACGCAATCCCAACGCGCAAAATCATTCTACATAAACACCTTCAACTCAAAATTCATCACTCAAATCAACATTCAATCCTTAAATACAACCCAAAATCAATCTCCCCCAATTCCCAATTCCCCAAATTCCAAGAGATGGACAGATTCTCGTGCTACGAGAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTTACCCGGATCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCGGAGGCGGAGGCGGCGGTGGCGGCCTTCGATTCGGACGGCGACGGACTGCTGGAGATTACGGAGTTCGAGAGGTTCGTGGAGAAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGAACTGTCGGCGATTGCATGAAAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTCATGAGTTTAGGGCCATGACGTTGCTCTGAAAACAAACATTCGAGTTTATACATATTATTTTTAGGAGGGATGAATAACCCATCTAGATTAGATTATATTTTATGTTCTCGGATTCATTGAATTCAGTGAGTAGACATGTTTTCTAAAATTGTTTTCGGATTCTATGATCTAAATAGTATAAATGATGAAAACAATATTTTTATATTTTCATTGTATTAGAATTTGAAAATTAAAAATGCAGAATTATATTAAACAAAGATAAAATTTTAT TCATTCCCTTCGTCACAATACTCTTTACACGCAATCCCAACGCGCAAAATCATTCTACATAAACACCTTCAACTCAAAATTCATCACTCAAATCAACATTCAATCCTTAAATACAACCCAAAATCAATCTCCCCCAATTCCCAATTCCCCAAATTCCAAGAGATGGACAGATTCTCGTGCTACGAGAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTTACCCGGATCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCGGAGGCGGAGGCGGCGGTGGCGGCCTTCGATTCGGACGGCGACGGACTGCTGGAGATTACGGAGTTCGAGAGGTTCGTGGAGAAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGAACTGTCGGCGATTGCATGAAAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTCATGAGTTTAGGGCCATGACGTTGCTCTGAAAACAAACATTCGAGTTTATACATATTATTTTTAGGAGGGATGAATAACCCATCTAGATTAGATTATATTTTATGTTCTCGGATTCATTGAATTCAGTGAGTAGACATGTTTTCTAAAATTGTTTTCGGATTCTATGATCTAAATAGTATAAATGATGAAAACAATATTTTTATATTTTCATTGTATTAGAATTTGAAAATTAAAAATGCAGAATTATATTAAACAAAGATAAAATTTTAT ATGGACAGATTCTCGTGCTACGAGAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTTACCCGGATCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCGGAGGCGGAGGCGGCGGTGGCGGCCTTCGATTCGGACGGCGACGGACTGCTGGAGATTACGGAGTTCGAGAGGTTCGTGGAGAAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGAACTGTCGGCGATTGCATGAAAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTCATGAGTTTAGGGCCATGACGTTGCTCTGA MDRFSCYERVFNSIDTDCDGKVSPHDLLTRIAAVTGEELTEAEAEAAVAAFDSDGDGLLEITEFERFVEKGDEQGKEMREAFEMYEMEGLGVITPVSLRRMLSRLGESRTVGDCMKMIAKFDVNGDGVLCFHEFRAMTLL Homology
BLAST of Tan0003671 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27 Identity = 67/144 (46.53%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.0e-27 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26 Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24 Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy Swiss-Prot
Match: Q2QYW1 (Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=39947 GN=CML25 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-24 Identity = 70/141 (49.65%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of Tan0003671 vs. NCBI nr
Match: XP_022989992.1 (putative calcium-binding protein CML19 [Cucurbita maxima]) HSP 1 Score: 219.2 bits (557), Expect = 2.3e-53 Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0003671 vs. NCBI nr
Match: XP_023520938.1 (probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.5 bits (545), Expect = 5.7e-52 Identity = 109/138 (78.99%), Postives = 121/138 (87.68%), Query Frame = 0
BLAST of Tan0003671 vs. NCBI nr
Match: XP_022962715.1 (probable calcium-binding protein CML31 [Cucurbita moschata] >KAG6601838.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032546.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212.2 bits (539), Expect = 2.8e-51 Identity = 108/140 (77.14%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Tan0003671 vs. NCBI nr
Match: XP_038875509.1 (putative calcium-binding protein CML23 [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 1.7e-48 Identity = 105/140 (75.00%), Postives = 120/140 (85.71%), Query Frame = 0
BLAST of Tan0003671 vs. NCBI nr
Match: XP_004150479.1 (probable calcium-binding protein CML31 [Cucumis sativus] >KGN51513.1 hypothetical protein Csa_008833 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 7.2e-47 Identity = 104/145 (71.72%), Postives = 120/145 (82.76%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy TrEMBL
Match: A0A6J1JHC9 (putative calcium-binding protein CML19 OS=Cucurbita maxima OX=3661 GN=LOC111487021 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53 Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy TrEMBL
Match: A0A6J1HFW4 (probable calcium-binding protein CML31 OS=Cucurbita moschata OX=3662 GN=LOC111463121 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51 Identity = 108/140 (77.14%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy TrEMBL
Match: A0A0A0KPM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571560 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47 Identity = 104/145 (71.72%), Postives = 120/145 (82.76%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy TrEMBL
Match: A0A5D3E2X7 (Putative calcium-binding protein CML31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00150 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45 Identity = 100/144 (69.44%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of Tan0003671 vs. ExPASy TrEMBL
Match: A0A1S3AUA4 (probable calcium-binding protein CML31 OS=Cucumis melo OX=3656 GN=LOC103483041 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.9e-45 Identity = 100/144 (69.44%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of Tan0003671 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 ) HSP 1 Score: 114.0 bits (284), Expect = 9.7e-26 Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Tan0003671 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 ) HSP 1 Score: 114.0 bits (284), Expect = 9.7e-26 Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Tan0003671 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0
BLAST of Tan0003671 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 ) HSP 1 Score: 100.9 bits (250), Expect = 8.5e-22 Identity = 62/132 (46.97%), Postives = 79/132 (59.85%), Query Frame = 0
BLAST of Tan0003671 vs. TAIR 10
Match: AT1G76650.2 (calmodulin-like 38 ) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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