Tan0003563 (gene) Snake gourd v1

Overview


Name	Tan0003563
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG11: 43585224 .. 43586108 (+)
RNA-Seq Expression	Tan0003563
Synteny	Tan0003563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGATCTCATGTCATGACCTAATGAATGTAAGTTGTAACCTTGTGGAGCTGATGAAGAAAAGTATCATTTTATGTGATTGTAGAATCCAAACTTTGCTTAGGATTTGGCAGTGTTGGTCCATGAGACCCAAAAAGGAAAGGCATTTTAGTTTGCCTTGTCCTTCAACTTTAACATTCCCATCTTATCTGTCAAACCCATATGGATGCTACAGAAAAAAGTTAGATTTAAAGTTAAGCAATTATTCAAAGGAAAGATCCATTTTGCTACCTTTTTTTTCATTCCCAACCACAAATCAATGATCTTTGCTTTACCCTTTCCTAATCAAATCCATTTTCAAACACAGGGAACTATTACCTCAACAAGCAAAGCAATGTCTTCCCCCCCTTTTTTTATCATCTGCTTCTCCTCCATCCCTCCCTTCCTTCGGCCATTTTCCGTGACCATGGAAGACCCGAACACACTAGCAGCTGACTGCATTGTCGTATGCTGTTGCTGCGAATGCCTGGCGTTGCAGATCGTTCTCCTTTTGTTACTCAAGCTTCCGTGGAAACTCGTTCGGAAGACGAGAGAATTTGCCAAAAGAAGGCTAAGACAGAGAGAAAAAGAGGAAAAGATGGTAGAGAGAGTAATGAGTGGTTCTAAAGATGAGCTTAGAGGAATTAGTAATGGAAGATGCATGAGAAATGAAGGAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTGATGGAGGATTTGCAGGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAAGGGTAATTCAATTTCAGGTTCTTGCAGAGATCAAGAGCAATTTAGTCCTACAAATGTACAATTTCAATTAATTCAAGTAATTCCTTCTACATGA

mRNA sequence

GATGATCTCATGTCATGACCTAATGAATGTAAGTTGTAACCTTGTGGAGCTGATGAAGAAAAGTATCATTTTATGTGATTGTAGAATCCAAACTTTGCTTAGGATTTGGCAGTGTTGGTCCATGAGACCCAAAAAGGAAAGGCATTTTAGTTTGCCTTGTCCTTCAACTTTAACATTCCCATCTTATCTGTCAAACCCATATGGATGCTACAGAAAAAAGTTAGATTTAAAGTTAAGCAATTATTCAAAGGAAAGATCCATTTTGCTACCTTTTTTTTCATTCCCAACCACAAATCAATGATCTTTGCTTTACCCTTTCCTAATCAAATCCATTTTCAAACACAGGGAACTATTACCTCAACAAGCAAAGCAATGTCTTCCCCCCCTTTTTTTATCATCTGCTTCTCCTCCATCCCTCCCTTCCTTCGGCCATTTTCCGTGACCATGGAAGACCCGAACACACTAGCAGCTGACTGCATTGTCGTATGCTGTTGCTGCGAATGCCTGGCGTTGCAGATCGTTCTCCTTTTGTTACTCAAGCTTCCGTGGAAACTCGTTCGGAAGACGAGAGAATTTGCCAAAAGAAGGCTAAGACAGAGAGAAAAAGAGGAAAAGATGGTAGAGAGAGTAATGAGTGGTTCTAAAGATGAGCTTAGAGGAATTAGTAATGGAAGATGCATGAGAAATGAAGGAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTGATGGAGGATTTGCAGGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAAGGGTAATTCAATTTCAGGTTCTTGCAGAGATCAAGAGCAATTTAGTCCTACAAATGTACAATTTCAATTAATTCAAGTAATTCCTTCTACATGA

Coding sequence (CDS)

ATGCTACAGAAAAAAGTTAGATTTAAAGTTAAGCAATTATTCAAAGGAAAGATCCATTTTGCTACCTTTTTTTTCATTCCCAACCACAAATCAATGATCTTTGCTTTACCCTTTCCTAATCAAATCCATTTTCAAACACAGGGAACTATTACCTCAACAAGCAAAGCAATGTCTTCCCCCCCTTTTTTTATCATCTGCTTCTCCTCCATCCCTCCCTTCCTTCGGCCATTTTCCGTGACCATGGAAGACCCGAACACACTAGCAGCTGACTGCATTGTCGTATGCTGTTGCTGCGAATGCCTGGCGTTGCAGATCGTTCTCCTTTTGTTACTCAAGCTTCCGTGGAAACTCGTTCGGAAGACGAGAGAATTTGCCAAAAGAAGGCTAAGACAGAGAGAAAAAGAGGAAAAGATGGTAGAGAGAGTAATGAGTGGTTCTAAAGATGAGCTTAGAGGAATTAGTAATGGAAGATGCATGAGAAATGAAGGAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTGATGGAGGATTTGCAGGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAAGGGTAATTCAATTTCAGGTTCTTGCAGAGATCAAGAGCAATTTAGTCCTACAAATGTACAATTTCAATTAATTCAAGTAATTCCTTCTACATGA

Protein sequence

MLQKKVRFKVKQLFKGKIHFATFFFIPNHKSMIFALPFPNQIHFQTQGTITSTSKAMSSPPFFIICFSSIPPFLRPFSVTMEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSISGSCRDQEQFSPTNVQFQLIQVIPST

Homology

[Close]

BLAST of Tan0003563 vs. NCBI nr
Match: KAG7031430.1 (hypothetical protein SDJN02_05470, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-62
Identity = 125/146 (85.62%), Postives = 133/146 (91.10%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MEDPN LAADCI +CCCCECLALQI LLLLLKLPWKL+RKTREFAKRRLRQR+KEEKM  
Sbjct: 1   MEDPNMLAADCIAICCCCECLALQITLLLLLKLPWKLIRKTREFAKRRLRQRQKEEKM-- 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
            VMSG KDELRG+SN RCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI
Sbjct: 61  -VMSGYKDELRGLSNERCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCR ++QF PT V++Q IQVIP T
Sbjct: 121 SGSCRAEQQFYPTTVRYQSIQVIPCT 143

[Close]

BLAST of Tan0003563 vs. NCBI nr
Match: XP_038874336.1 (uncharacterized protein LOC120067034 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-58
Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQIVLLLLLKLPWKLVRKTREFAKRRLR REKEEKMV 
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIVLLLLLKLPWKLVRKTREFAKRRLRMREKEEKMVG 60

Query: 141 RVM-SGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNS 200
           +   S  +D+L+GISNGRCMR+E +GLGLS CMEEIEKVM+DL EKGEFGFGSFWG GNS
Sbjct: 61  KEKGSDYRDKLKGISNGRCMRSEENGLGLS-CMEEIEKVMQDLHEKGEFGFGSFWGHGNS 120

Query: 201 ISGSCRDQEQFSPTNVQFQLIQVIPST 227
           ISGSCRD++Q+SPTNVQ+QLIQVIPST
Sbjct: 121 ISGSCRDEQQYSPTNVQYQLIQVIPST 146

[Close]

BLAST of Tan0003563 vs. NCBI nr
Match: XP_011649060.1 (uncharacterized protein LOC105434576 [Cucumis sativus] >KGN61402.1 hypothetical protein Csa_006177 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-56
Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQI+LLL LKLPWKLVRKTREFAK+RLR REKEEKMV 
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
           +   G  +E+RGISNG CMRNE  GLGLSCCMEEIEKVM+DL EKGEFGFGSFWG GN+ 
Sbjct: 61  K-EKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTS 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCRD + FSPTNVQ+QLIQVIPST
Sbjct: 121 SGSCRD-DLFSPTNVQYQLIQVIPST 144

[Close]

BLAST of Tan0003563 vs. NCBI nr
Match: XP_022928895.1 (uncharacterized protein LOC111435666 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 4.7e-56
Identity = 117/147 (79.59%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV 
Sbjct: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWG-KGNS 200
                 +DE+RGISNG CMR+E DGLGLSCCMEEIE+VM+DL EKGEFGFGSFWG KGNS
Sbjct: 61  -----MEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNS 120

Query: 201 ISGSCRDQEQFSPTNVQFQLIQVIPST 227
           +SGSCRD+E F PT+VQ+QLIQVIPST
Sbjct: 121 VSGSCRDEEPFDPTDVQYQLIQVIPST 141

[Close]

BLAST of Tan0003563 vs. NCBI nr
Match: XP_008457185.1 (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo] >KAA0039665.1 uncharacterized protein E6C27_scaffold744G001560 [Cucumis melo var. makuwa] >TYJ95549.1 uncharacterized protein E5676_scaffold767G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-56
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV 
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPCKLVRKTREFAKKRLGMREKEEKMVG 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
           +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+DL EKGEFGFGSFWG GN+ 
Sbjct: 61  KEKGCCGNELRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTR 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCRD E FSPTNVQ+QLIQVIPST
Sbjct: 121 SGSCRD-ELFSPTNVQYQLIQVIPST 145

[Close]

BLAST of Tan0003563 vs. ExPASy TrEMBL
Match: A0A0A0LKX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G116260 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.0e-57
Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQI+LLL LKLPWKLVRKTREFAK+RLR REKEEKMV 
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
           +   G  +E+RGISNG CMRNE  GLGLSCCMEEIEKVM+DL EKGEFGFGSFWG GN+ 
Sbjct: 61  K-EKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTS 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCRD + FSPTNVQ+QLIQVIPST
Sbjct: 121 SGSCRD-DLFSPTNVQYQLIQVIPST 144

[Close]

BLAST of Tan0003563 vs. ExPASy TrEMBL
Match: A0A6J1ESS6 (uncharacterized protein LOC111435666 OS=Cucurbita moschata OX=3662 GN=LOC111435666 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 117/147 (79.59%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV 
Sbjct: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWG-KGNS 200
                 +DE+RGISNG CMR+E DGLGLSCCMEEIE+VM+DL EKGEFGFGSFWG KGNS
Sbjct: 61  -----MEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNS 120

Query: 201 ISGSCRDQEQFSPTNVQFQLIQVIPST 227
           +SGSCRD+E F PT+VQ+QLIQVIPST
Sbjct: 121 VSGSCRDEEPFDPTDVQYQLIQVIPST 141

[Close]

BLAST of Tan0003563 vs. ExPASy TrEMBL
Match: A0A5D3B961 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00440 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV 
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPCKLVRKTREFAKKRLGMREKEEKMVG 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
           +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+DL EKGEFGFGSFWG GN+ 
Sbjct: 61  KEKGCCGNELRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTR 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCRD E FSPTNVQ+QLIQVIPST
Sbjct: 121 SGSCRD-ELFSPTNVQYQLIQVIPST 145

[Close]

BLAST of Tan0003563 vs. ExPASy TrEMBL
Match: A0A1S3C4I0 (uncharacterized protein LOC103496924 OS=Cucumis melo OX=3656 GN=LOC103496924 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLALQI+LLLLLKLP KLVRKTREFAK+RL  REKEEKMV 
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPCKLVRKTREFAKKRLGMREKEEKMVG 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGKGNSI 200
           +      +ELRGISNG CMRNE  GLGLSCCMEEIEKVM+DL EKGEFGFGSFWG GN+ 
Sbjct: 61  KEKGCCGNELRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTR 120

Query: 201 SGSCRDQEQFSPTNVQFQLIQVIPST 227
           SGSCRD E FSPTNVQ+QLIQVIPST
Sbjct: 121 SGSCRD-ELFSPTNVQYQLIQVIPST 145

[Close]

BLAST of Tan0003563 vs. ExPASy TrEMBL
Match: A0A6J1HXD6 (uncharacterized protein LOC111468906 OS=Cucurbita maxima OX=3661 GN=LOC111468906 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.2e-54
Identity = 116/147 (78.91%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKMVE 140
           MED NTLAADCIV+CCCC+CLAL I+LLLLLKLP KLVRKTR+FAKRRLR REKEEKMV 
Sbjct: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60

Query: 141 RVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWG-KGNS 200
                 +DE+RG SNGRCMR+E DGLGLSCCMEEIE+VM+DL EKGEFGFGSFWG KGNS
Sbjct: 61  -----MEDEVRGSSNGRCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNS 120

Query: 201 ISGSCRDQEQFSPTNVQFQLIQVIPST 227
           +SGSCRD+E F+PT+VQ+QLIQV PST
Sbjct: 121 VSGSCRDEEPFNPTHVQYQLIQV-PST 140

[Close]

BLAST of Tan0003563 vs. TAIR 10
Match: AT3G25597.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-16
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 81  MEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTRE-FAKRRLRQREKEEKMV 140
           MED N  AADC+VV CCC CL LQI + + L LP KLV+ TR+ + K  + +R K   + 
Sbjct: 1   MEDLNAFAADCVVVSCCCNCLVLQIAIFIFLGLPQKLVKNTRKCYTKWGINRRIKRMGLC 60

Query: 141 ERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFWGK 197
                 ++ +         M  E +G G   C+EE+E+V+E+  + GEF FGSFWG+
Sbjct: 61  FECRENTEVDSEWRKESMMMSMEMEGFG---CIEEVEQVLEEFSKNGEFLFGSFWGQ 114

[Close]

BLAST of Tan0003563 vs. TAIR 10
Match: AT1G26140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68700.1); Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 6.4e-11
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 79  VTMEDPNTLAADCIVVCCCCECLALQIVLLLLLKLPWKLVRKTREFAKRRLRQREKEEKM 138
           V  ED    AADC+V+ CCC+CL LQ+ + +  K+P KL +K ++F KR         K 
Sbjct: 44  VMEEDCGAFAADCVVLSCCCQCLVLQVSVFIFFKIPRKLAKKMKKFVKRIC------GKT 103

Query: 139 VERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMEDLQEKGEFGFGSFW 195
           ++  M   K+E     NG       +G   S C E+I++++++L     F FGSFW
Sbjct: 104 LQPTMEDVKEE-HWSGNGFPFE---EGSSRSICFEDIDRMLQELSMNKGFLFGSFW 149

[Close]

BLAST of Tan0003563 vs. TAIR 10
Match: AT1G68700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 122 REFAKRRLRQREKEEKMVERVMSGSKDELRGISNGRCMRNEGDGLGLSCCMEEIEKVMED 181
           ++F  RRL ++++ +   E V+    D+ R          E  G  +S CME++E+++++
Sbjct: 2   KKFVTRRLGRKKRRD--TEIVLPTKDDDCR----------EEHGSEVS-CMEDVEEMLQE 61

Query: 182 LQEKGEFGFGSFWGKGNS 200
           L  KGEF FGSFW +G+S
Sbjct: 62  LSMKGEFVFGSFWRQGDS 66

The following BLAST results are available for this feature:

BLAST of Tan0003563 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031430.1	1.2e-62	85.62	hypothetical protein SDJN02_05470, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038874336.1	1.0e-58	82.99	uncharacterized protein LOC120067034 [Benincasa hispida]	[more]
XP_011649060.1	1.2e-56	80.82	uncharacterized protein LOC105434576 [Cucumis sativus] >KGN61402.1 hypothetical ...	[more]
XP_022928895.1	4.7e-56	79.59	uncharacterized protein LOC111435666 [Cucurbita moschata]	[more]
XP_008457185.1	8.0e-56	80.82	PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo] >KAA0039665.1 unc...	[more]

BLAST of Tan0003563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKX5	6.0e-57	80.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G116260 PE=4 SV=1	[more]
A0A6J1ESS6	2.3e-56	79.59	uncharacterized protein LOC111435666 OS=Cucurbita moschata OX=3662 GN=LOC1114356...	[more]
A0A5D3B961	3.9e-56	80.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C4I0	3.9e-56	80.82	uncharacterized protein LOC103496924 OS=Cucumis melo OX=3656 GN=LOC103496924 PE=...	[more]
A0A6J1HXD6	1.2e-54	78.91	uncharacterized protein LOC111468906 OS=Cucurbita maxima OX=3661 GN=LOC111468906...	[more]

BLAST of Tan0003563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25597.1	6.6e-16	41.03	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT1G26140.1	6.4e-11	35.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G68700.1	7.6e-04	34.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264:SF27	F24J5.7	coord: 81..223
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 81..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003563.1	Tan0003563.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane