Tan0003550 (gene) Snake gourd v1

Overview
NameTan0003550
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
LocationLG05: 30088188 .. 30096783 (-)
RNA-Seq ExpressionTan0003550
SyntenyTan0003550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAGTTCCATCCAGCGTTTTTACTTTGAGCTCCCCCGGACCGTAGCTCTCCGTCGCGCTCTCTTTCTCCATCTCAGGCTGTGCGTTCGGTCGGTGGATCGATGGCGTCGAGTCTCTTCAAAGCGTTTGTTGAATCTTCCTCCAAATTTCCATCTTCGGTTAGGAATCTCAGTCTTGTTAGCAATCAAATCAGCCCGCACACCGCTAAATGGATGCAGGTATCCAGTAGTTTCTCGCAAATCCCCCTTTCGAAATTTAGTGCTTCTACGCCCGTGTTTGAGTTAATTGCTGCTGATTTTGTTTTCTCATTTATAATTCGATCTTCTTTCTAACTTTACTAGAGAACTATTGAACAAAGATTTAGAGCTTGGGTCTGAAGGCTCCCAATTAATGTGGCGATTTGTTTTTGTTTTCCTGAATCGATTGTCGTTATGTGGAAATTAATTCTTGTTGTTTGGAGAGAAGAGAAAAAACCTTGTTTTCCAGTGGCATTGATGGATGCGAAACCTTTTGGTGCTCGTCTTTCATCAAAACAAATTTATCTGAATTGAAATATTTTATTTCTCACTAGCTCTCCCCCCTCCCCTTCCTGCCCATGCTATGTCTTATCATCTTCATGTTATGTGGGTTTTGTATAAGCATGAAGATTATTAAAGAACATACGATCTTTGGCAACTGTGGCTCACCTTTCGAAATACTAAAGAATCTGTATCCCTTTCTGTTGATAGCTACCTGTCTGGCTGCCCACTCCCTATCTTAATTTTTTTCTTTTTACAAGAAGCATGAACTTCATTTATATTGAAAAGGTACAAACTATCAACTTTCTAAAGAATATACAAAAGTAGAAAAGAAAACTCCTCTTGTTTGCACGCAAAATACCAACGAGGAAAGAGTTGTCATGAATATCAAGTTAGTGAAAACCCCTGAAACAAATGGAAATTGAAAGGGAAACGAATTTCTTGCATCCTGGTCCGAAGGTGTTTCCATCTTCTTGTACGAGTGCAACGCATTTCCAGACTCTAAATTTCACTTGGATCTTTGTTTGTTTGTTTGTTTCTTTTTTTTGAAAAAACAATTACATTAATAAATGAAATGGAGAATACTCCAATTACCAATAGGTGAATTACAAGAAAGACTGCCAATTAGAAATGAAAAAAGATAATGTGAAAAATCCAAAAGGTTGTACATCTTTGCACTACAAAAAAAACATTAGAAAGAACAGTGTCCATAAAACGATCAAAAGTAGAGGAAACATCTCTAAAGTGACGACCATTTCTCTCAATCCAAAAGTTCCAAAGAAAAGCACGAAATAGGGCAAGCCACAAAAACTTCATTGTACCTTTGAAAGGATGATCCACCAAGACAAAAGATAGAAAATAAAAAAATATTATAAGAAAGTGGCATTGGCCATTCAAAAGCATCTAAAACACACCACCAAAATCTCATAGCCAAAGGGCAATGCACAAACAAATGCCCTGCAGATTTTGTGTCGAAGTTACACATGAAACAACATGAAGGAGATAGAGTCATATAAGACATTTTTTTTTTTAGCCAATCAGAAGTATTAACAACTCCCAAGCTAAGCTCGCAGAGAAAGATCTTAATCTTCTTTGGATAATGATCCTTCCAAATGACAGAGTAAATTTTTCATAACCTCAGATAAGCAAAACCTAACAAACTGTCAGTAAGAGATTTGACAGGAAAACAACCAGAAGACTCCAAAGGCTAAACCCATGGATCAGGTTTGTTCAAAATTCGAACCAGGACAACAAATGAGAAAGAGATGCCCATTCATTGGTTTTCAAATCTGTTAAATTACGACGAAGTTGCAGATCCCAAGCTGAACTAGTAGAATTCCACATACGAGTCACCGAAAAATTGGGATGCAAAGCAAGCCTATAAAGGCGTGGTAAAGGATTAGCTATAGGACCATAACTTAGCCATGAATCAGTCCAAAAAGCTGAGGAGCAACTATTCCCAATGTGTCGTATAGATCGACTAGTAACCAAATCTCGAAGATTACAAATATATCTCCATGGGGACTTATGAGAGGCATTTCTAATAGGTTGTGGCCAACCATCTACCGTCATATTTACCATAGTATTTTGCTACTATAAGGTTTCTCCTCAATGAGTTGGGTTCCTGTGTAAATCTCCAAATCATTTAGCCAATAAAGCCAAGTTACGATGTGCAAAATTATCAATCCCAAGACCTTCCATAAGTTTAGGAAACTGAGTAGTTGCCCAATTCACATTATGAACTCCACCATCTCCCTTTGCTCCTTCCCCAAAAAAAAAATATCACGTATGATCTTATTTAATATCAAGATAATTTTGGGAGTTTAAAGAAGGACATGTAGTATGTAGGCTACTAGAGAGCGTAGCCTAAATAAGAATAAGTCTACCACTTTTGGAAATAAAGCGTATTTCCAATTATGTAGTTTCTGTTTCAATCGTTCTATAATAGGCTGCTAAAAAGAGACATATTTGGAGTTTCCTCCCAAAGGTAAACCAAGATAAGAAGTTGGCCAAGAACCCTATTTGCAACCAAAGGTCGTCAACATCCAATCCAATTCAGATTGGTCAATATGAATTCTTACTCGCTCTTTGCTAAGTTAATTCTTAGACCAGACGCTCTCTAAAAAATCTTAATCACTTCAAAAAGGTGTTGCAACGCAATTCGATTAGATGCAGAAAAGAGTAGAGTATCATCCGCAAATTGCAAATGGTTTAAACAAAAAGATGTTGCACCAATAGGGTGAGTAGATATAATACCCAGGCTTGCACTATGGGCCAAAAGACGACTAACGCAATCTGAAACCAAAATAAAGTGGAAAGGAGATAACGGATCTTCTTGTCGAATGCCACGAGAAATAATAATTTTTCCACGAGGTATACCATTAATAATAATTGAGTAGTTAGCACTAGCAATACAACCTCAAAATCCATTTCCTCCATAAGCTCCCAAAGCCTTTGGCATGTAAAACTGCACCAAGAAAATCCCAATCAACTGTGTCAAAAGCCTTCTCAAGGTCCAATTTTAACACCACACCTTTAAGATTTCTAATGGTCCAATCATCAATCAATTCTTTAGGAAGCATCAAGAATGTGACGATTAGCCACAAAAGCAAGCTTACTTTCTGCAATAGTGGAAGGTAAAGCCGATTTCAAGCGATTGGATGAAACCCGCTCAACAGTCTTATAGGCACAAGGAATAAGGCTGATAGGTCGGAAATCACTGACAACTTGGAGGCAAGTTTCTTAGGAATTAAACAGATATAAGTCTCATTCATAGACGCATTGACCACACCAGACGAATAAAAGTCCTAAATCATTTCCATAACATTTGATTTTATAGTGTCCCAAAAAAATTTGAACAATTCTGTCTTGAAACCATCGGGGCCTAGAGATTTACTAGAACCCAAAGAAGAAACAGCTTGGAAAACTTCCTCTTCAACGATCACACCTTCAAGACCATTCACTTGTTCTAAGGGGATAGGACTCCAATCAACATTAGTAGGCAAAACCTGATGTCTATCATCTTTGGTGAATAATTTTGAATAGAAGTTGATAAACTCGTGTTCAATGTCTATGAGCAGGTACAAGACTAACCCCTTCGCTAGAGAAAATTTCAGTGATTAAATTCTTCCTCTTTCGTGCAGCTAAAATTCAATGAAAAAATTTAGTGTTCTCATCACCCAATTTAAATCTTTATTGCCAATAAATGTGGCCTTGTGTTGTCAAAACCTCAATTTGATCACGAATGATACAATGGGCTCAATCTGAGGGGTAGCCAATGGTGCACTATCCTCCAAATTATCCAAAATCTGTAGTTGGGATACAGGAGATAGTTTAGCTACCTCAAAACGATGAGTTTTACTCCATTCTATTGAAACGTCTTTGAGACCCTTTAATTTTATCATCAATCCATGACCAGGCCAACCTACTAAACAATTCTGACTCCACCAACCCGAAACAACCTCCTTAGTCCACGAAATCTGGAGCCATGAGTTTTCAAAGCGGAAAGGACAAAACCCCTAAAAAATATTACCAAAAGTAAGAGCAAGTGGAAAATGGTCTAATGTAACACGAGCTAAACATTCGAGAGTAGCAGGACCAAACTTGTTTGGGCATCCTTCTGTGATTAGGATCCTATCCAAAAGAGACATACATTGTGTGCTAGACCATGTCAAGCAAGCTACATGCAGAAATCCTCTGACGAAAAGTGTTCACACTTCTATTTCATACTTCTATTAATGGAATGTTCATGCAACTTTTCCCAAGTCCATGAAGTAACATTAAAGTCTCCCCAATAATCCAACAGTCTCCACCCAAACCAGCCAAATCATCTAATTCTTTCCAATATTCGTCACAGAAATCATTTCCAAATGGTCCACTTACTGCCATAAGCTAAAAAGAGAAACCATTAGCCAAAAAAATGTGAATTGATATAGTATACTGACCCTTTCTGACTTCTTTGATTGCGAAGTCAGACTCACTCCAAAGAATTAAGATTCCACTCAAAGAGTTAATAGCATCAAGAGCTACCCAACCAATTTGTGTTGAACTCCAAGCAGATTTTATCACGTCATCTGCAATGTTTTTTTTGTTCTTACTATTTATTTATTTGGGTACATAGATTTGCATTTCAATGTCAACGGCCTTTTACCACAGATGTCTACAATTTTGGGCTCTTCTTCTAGGCTTGATTTGAGCTCTTCTTTTGAACTTGATTATGGGACTCCACAAGCCTAATACTTCTAAGACTAGTTTAATCATTATCAGCCCCCACTGTCCTTGCTCGTAACATCCAAGTCTTCGACTACAAACTACATGGTTCCATTAAAATGATAAAAATATACTTGCCCTTAGCCTCTTGCTATGAGATGTCTTCCAAGTTGCAAAAATACCCGGCTGACTCTTGGTTCAATATGAAAGATAGCTTAGTTTAGCGAGCCCATATCATTACAAAGGAGATAATTGGAACTTAGTTTGAATGTGTTAGTTACTTAAGCCTTAGTCGGCTTATATTGTCACATGTTATTTGTATGCAGTATCTGTATATTTTTAGTTGCTCTCTGCAAACTCTTAGTTCAATTAAGATGAAGGCTTTTTTAGACTCACTACTTACCTATTATGACCCCTGGGAAATAAAAATTTCTTACCAATCTTGACCTCTGTATTTAGGCTAGCTTCCTAACTTAGACATTATCTTTCACACCTACATGTTTTCTGACTTGGACTCCATAATTGGAAGATACTTTCCGGGGTACCATATTTTCCTTCGAGAACTTGTAATTTGCCTACCGATATGACTGTTGAGATTGTTTTCTAATGACTGTCATATCTTCTCAATTATTATTATTATTGTTTTTGATAAGATATACTTTTTTATTATATATACTCGTATGAAAGAACAAACAAAAGTACAGGCTGTACAAAAAGACAATCCCAAGCCAAAAAGGAACTGTCAACAAAAGGAGTTTCCAATTATTAAGAATCAAAACTAAAAAATAATTACAAACTAATTTAGTGAGAGACGCCCATGTTGAGGCATTGAAAACCCTCCTATTTCTCTCCAACCTGCCCCCAAGAATCCTTTACCCTTTTCAAGAACCCTTCTATTAATTTCCGACCAAATATACCCAAAAATAGCTGAAGATGCTTCTTGCCCCATAAACTTTCCTTCGCCACCAGTGCAAATGGATCAACTTCTTCATCGTGGAACAATAATCTTTGCATAGAGTCGAGCTAACACCAAAAGAATTTACAGGTCTAACCCAAATCTTTATTGTGAAGTAACATTTCCATAATGGCCCAAATCTTCTAATGCATTTCTTTTTAAAGAGAAATGGTGGTGTCAGTGATAAATGGAAATACAAAAGGGGAAACCCCAGTCTATGGATTGCCAAGAAGCCTTCCAATTGGCCAAAGGAATGCTAAAACTGTAGTTGGAAAAGGGAGGGGAGCATTTACCAAGTTAACGCAAGAGTGATTGCAGAGAACAAAAGATAAACCAATAGACACTCAACTGTTTCTTTCTAACCAAATCTTTCACTAAAAGCTCTGCTGAAATTGGACCAAAGAGTTTCTCTCTCCCTTTATTTCTAACCAAATCTTTCAAAAAAAAAACCCTGCTGAAATTGGACCTGAGAGTTCTTCTTTCTGGCTGATTAATGAGAAGAGAAGCCAGCAAAGTTAAACATATTTGCAGGGAAGCAAATTGCCAGCGAAAGGCCTCTGTAAGGACCCAAAGTTGTGAGCAAAGGGGTAGTTGGAAAAGAGGTGAACTGCGTTTTCAGCCACTCCAAATATAGAGAAGGCAGCACTTTGGAGATAGAGCTTGCTTGGGTGACCTTCTTTGGATGGTAACTCCTTAAAAAACACACATCTGGTGCATTCTTTGCCGGCAACATGAGGATCTTAACCATTTACTATGGGATTGCCTGTTTGTTTTCTTCCTTTGGAGTTGGTTTTTCAGGACTTTTGGGATTGTGTTGGCTTGCAACAAAGTTTGTTGTTCTATGATCGAGGTGGTGCTCTTGAACCCTCCTTTTCGGAATAAAGCAAGGGTTTTGTGTCAGACTTTTTTTTTTCGCATTTTGGGGGGAATTTGGTGTGAAAGGAACATAGGATTTCCTGGGAGAAACTTTGGGAATTGGCTAGGTTTAATTCTTCTTTATGGACGTCTGTTAATCAAGTTTTTGTAATTACCAGCTGGGTCACATTCTTTTGGGTTGGGGTCCGGTCTTGTAGCTAGTGTTGAAACCTCTTCTTGTGGGCTTGTTTTTGTACGCACTTGTACATTTCTCCATTTGTCTTCATAAAAGCTCGGTTTCTTATAAAAAAACACACACACACACTTGACACTATTGAGAATCTAGAATCATGGAAGAGCATCCCTAGATAAAGGCAATGGTATTGACCCTATCTATCATGAACGATTAGCCAAGAGAAAAACATAACCTTTGTAGGAAAGAAATTACAAGATAACAAGAACAGGCTCGATGAAACTTCCGAATTGTTCTTTCTTTTGAATGTTGGCTTAGGATTTAAAAATCTTCCTGTTCCTTTCCAATCAAATTTACCACAACATAGCCCCAAAAAAAATCTGTCTGCCACTGAGCTTTCCATTTACCACCAAAGGGTGAGTGTAACAGCACCTCCTTCGTCAGGTAGCGGAAGAATTAGTAGGCTGCTTTATTAAATTATATCCTAAAAAGGAGGGATTGAGGTTTACACTAGAAAGTATTCATTGGTCACCACTATCTATGGACGAAAGATGCTGGCTGGAGAGACCATTTGGGGAGGAGGAGATTTGGGACTAAGAAAATTTGGATGCATTGATGAGAATAAGAAGACAAAAAGAGCTGTAAGAAAATCTCATTTAATTATCCATGTCAGCAAAAGTTGCAATTTGGGTACGAATGTTGTCGTTTGGCAACCCTTTCAATTTATATAATATTGGGATGCATTTATAACGGATTTCTTATTAACATGAAGTTCACAACTAATTATGGAGTTAATCGGACTTATTGGTTCTCTTTCAATGTATTAATAACAAATTAACAATGATAGTTGGTAATGGATGACTATGTTTTAAGCTGGAAAATTTGTTTTCAAGTTTTACGTTTTCCCCACATTTTTATGAGCATCTCCTGACTTCATTTTGGCAAATTTTAGTTTTGATTATAGTTCTCTTTTGATAATTGATACATTGCTTCTTTCGTTTGGGTCTTCATTTTTCTTTGGCATGACTTCAAACTAGTTTCCTTTTTTTACATCTGTTTCCTTAAATTATTGAGGGTTCAATCGAGTTCTACTGATTTTTCTTTTTTTACTTCTGTTTTAAGTAGTTTACCATTTTCTGGTACTAGGTTTTACTCTTTACGGTCCTATATAATGCACGTGGACATATGGAAACTTCATTTTATTTTCTTCTATAGGATACAAGTAAGAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCAAAGGCCGTATTGTTGCTTGTGAGGGAGGTTAGTCTGTAAATGTCTCCTTCCATGTATATTTTCATAGTAAATCACTTTCTAAGCAAGGGGCGATCACTTATTTGAATTCAAATCATTGCTGGTTTGCAGACAGCAATCCTGCCCTTGGGCATCCGATCGAGTTCATATGTCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATCTTCAAGTGATCATTTCAGCCAGCAACCCTAAACTTGGAAAGACAATGCCCTACCTTTCCAAACTTGACTTCTGTAATGCAATGACTGTAATGGGAATTTGTGAACTCCCCTCACTCACTTATGGCCGGGTCCATTGTCTTTGCCAAATTTGTTTCATTGCTCAAAAGGATTTGTTTAATGACCTATCTTGCCGTCTCAAATACCAATAAAAGGTTTTTGATATCTTGGAGTTGCAAGCTTGAAACGAATACTTTTTAATTCTTACCCACAGTATAATAGTAATCCTATTAATCTCTATATATATAGATATAGATTTTTTTGTTCAACGACATGTTGAGGGAGGGAGA

mRNA sequence

CAAAAGTTCCATCCAGCGTTTTTACTTTGAGCTCCCCCGGACCGTAGCTCTCCGTCGCGCTCTCTTTCTCCATCTCAGGCTGTGCGTTCGGTCGGTGGATCGATGGCGTCGAGTCTCTTCAAAGCGTTTGTTGAATCTTCCTCCAAATTTCCATCTTCGGTTAGGAATCTCAGTCTTGTTAGCAATCAAATCAGCCCGCACACCGCTAAATGGATGCAGGATACAAGTAAGAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCAAAGGCCGTATTGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGGCATCCGATCGAGTTCATATGTCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATCTTCAAGTGATCATTTCAGCCAGCAACCCTAAACTTGGAAAGACAATGCCCTACCTTTCCAAACTTGACTTCTGTAATGCAATGACTGTAATGGGAATTTGTGAACTCCCCTCACTCACTTATGGCCGGGTCCATTGTCTTTGCCAAATTTGTTTCATTGCTCAAAAGGATTTGTTTAATGACCTATCTTGCCGTCTCAAATACCAATAAAAGGTTTTTGATATCTTGGAGTTGCAAGCTTGAAACGAATACTTTTTAATTCTTACCCACAGTATAATAGTAATCCTATTAATCTCTATATATATAGATATAGATTTTTTTGTTCAACGACATGTTGAGGGAGGGAGA

Coding sequence (CDS)

ATGGCGTCGAGTCTCTTCAAAGCGTTTGTTGAATCTTCCTCCAAATTTCCATCTTCGGTTAGGAATCTCAGTCTTGTTAGCAATCAAATCAGCCCGCACACCGCTAAATGGATGCAGGATACAAGTAAGAAATCCCCCATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCAAAGGCCGTATTGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGGCATCCGATCGAGTTCATATGTCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG

Protein sequence

MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Homology
[Close]
BLAST of Tan0003550 vs. ExPASy Swiss-Prot
Match: Q9M9M6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-37
Identity = 77/111 (69.37%), Postives = 85/111 (76.58%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINE 60
           MAS+L KA + S    PSS RN S+ + Q        +  HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

[Close]
BLAST of Tan0003550 vs. ExPASy Swiss-Prot
Match: Q5AUI1 (Lactobacillus shifted protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=lbsA PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.3e-07
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 47  MELINEVPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHH 103
           +ELI++ P   VK +IV+C+G   P LGHP  FI  D+ E   C YCGL +  +HH
Sbjct: 120 IELIHKQPVRWVKDKIVSCDGGGGP-LGHPRIFINTDKPEIVPCGYCGLPFAHEHH 174

[Close]
BLAST of Tan0003550 vs. NCBI nr
Match: XP_022148513.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia])

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-48
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MAS+LFK  +ESSSKFPSS RNLSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. NCBI nr
Match: XP_023511819.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6571206.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011009.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.1 bits (510), Expect = 4.8e-48
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. NCBI nr
Match: XP_038900460.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 6.2e-48
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKIPSSARNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDNNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. NCBI nr
Match: XP_022986645.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. NCBI nr
Match: XP_022943963.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match: A0A6J1D4A8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017141 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MAS+LFK  +ESSSKFPSS RNLSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match: A0A6J1JEL4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484323 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match: A0A6J1FXJ3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448533 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.7e-48
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFKA VESSSK PSS R+LSLVSNQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match: A0A1S3CI88 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501074 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFK  +ESSS  PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match: A0A0A0LNG2 (zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.7e-46
Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQISPHTAKWMQDTSKKSPMELINEVPPIKVKG 60
           MASSLFK  +ESSS  PSS RNLSLV+NQI  HTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]
BLAST of Tan0003550 vs. TAIR 10
Match: AT3G03070.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 156.8 bits (395), Expect = 9.6e-39
Identity = 77/111 (69.37%), Postives = 85/111 (76.58%), Query Frame = 0 

Query: 1   MASSLFKAFVESSSKFPSSVRNLSLVSNQ--------ISPHTAKWMQDTSKKSPMELINE 60
           MAS+L KA + S    PSS RN S+ + Q        +  HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVKGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

The following BLAST results are available for this feature:
BLAST of Tan0003550 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9M61.4e-3769.37NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidop... [more]
Q5AUI13.3e-0746.43Lactobacillus shifted protein OS=Emericella nidulans (strain FGSC A4 / ATCC 3816... [more]
BLAST of Tan0003550 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022148513.12.8e-4891.26NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica ... [more]
XP_023511819.14.8e-4893.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucur... [more]
XP_038900460.16.2e-4892.23NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa ... [more]
XP_022986645.18.2e-4893.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ... [more]
XP_022943963.11.4e-4792.23NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ... [more]
BLAST of Tan0003550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D4A81.4e-4891.26NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordic... [more]
A0A6J1JEL43.9e-4893.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit... [more]
A0A6J1FXJ36.7e-4892.23NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit... [more]
A0A1S3CI884.4e-4790.29NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis ... [more]
A0A0A0LNG23.7e-4689.32zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=... [more]
BLAST of Tan0003550 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03070.19.6e-3969.37NADH-ubiquinone oxidoreductase-related [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.260.40q5lls5 like domainscoord: 49..99
e-value: 1.2E-15
score: 59.0
NoneNo IPR availablePANTHERPTHR13156:SF1BNAC04G49950D PROTEINcoord: 1..103
NoneNo IPR availablePANTHERPTHR13156NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNITcoord: 1..103
IPR019401Zinc finger, CHCC-typePFAMPF10276zf-CHCCcoord: 60..97
e-value: 6.2E-15
score: 55.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0003550.1Tan0003550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
cellular_component GO:0005747 mitochondrial respiratory chain complex I