Tan0003530 (gene) Snake gourd v1

Overview


Name	Tan0003530
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG02: 84671176 .. 84671763 (+)
RNA-Seq Expression	Tan0003530
Synteny	Tan0003530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCCTCAATAATAGCCTTACTTAAAAGCGTCCGTTTAACTGGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCGTTGTTGACGACCTACAGTTTGTACTGTCTGAGGAATGTCCTCAGATCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCATATGACCGCTGGATCAAGGCCAATGATAAGGCCAATGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCATTTGCAGAAATGTTTGGACAATCGTCTGGGCAGATTCGGCACGAATCCCTAAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTTGATATGATGGTCCACTTCAATGTGGCTGAGATGAACGGAGCGGTCATTGACGAGCAAAGTCAGGTATCATTCATTCTGGAATCTCTTCCGATGAGTTTCCTGCAATTCTGTAGCAATGCGGTGATGAAAAAGATAAGGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCAGTCTCTTATGA

mRNA sequence

ATGTCATCCTCAATAATAGCCTTACTTAAAAGCGTCCGTTTAACTGGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCGTTGTTGACGACCTACAGTTTGTACTGTCTGAGGAATGTCCTCAGATCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCATATGACCGCTGGATCAAGGCCAATGATAAGGCCAATGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCATTTGCAGAAATGTTTGGACAATCGTCTGGGCAGATTCGGCACGAATCCCTAAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTTGATATGATGGTCCACTTCAATGTGGCTGAGATGAACGGAGCGGTCATTGACGAGCAAAGTCAGGTATCATTCATTCTGGAATCTCTTCCGATGAGTTTCCTGCAATTCTGTAGCAATGCGGTGATGAAAAAGATAAGGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCAGTCTCTTATGA

Coding sequence (CDS)

ATGTCATCCTCAATAATAGCCTTACTTAAAAGCGTCCGTTTAACTGGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCGTTGTTGACGACCTACAGTTTGTACTGTCTGAGGAATGTCCTCAGATCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCATATGACCGCTGGATCAAGGCCAATGATAAGGCCAATGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCATTTGCAGAAATGTTTGGACAATCGTCTGGGCAGATTCGGCACGAATCCCTAAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTTGATATGATGGTCCACTTCAATGTGGCTGAGATGAACGGAGCGGTCATTGACGAGCAAAGTCAGGTATCATTCATTCTGGAATCTCTTCCGATGAGTTTCCTGCAATTCTGTAGCAATGCGGTGATGAAAAAGATAAGGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCAGTCTCTTATGA

Protein sequence

MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYDRWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNSRMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRYNLTTLLNELQTFSLL

Homology

[Close]

BLAST of Tan0003530 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.3e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.3e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.3e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. NCBI nr
Match: KAA0051952.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.3e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.3e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 133/195 (68.21%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYD 60
           M+S+ + +L + +L G N+ +WK+ +NT+L++DDL+FVL EECPQ+P  NA ++++E Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61  RWIKANDKANVYILASVSEVLAKKHEGMVSAREIMSSFAEMFGQSSGQIRHESLKYVYNS 120
           RW KAN+KA  YILAS+SEVLAKKHE M++AREIM S  EMFGQ+S QI+H++LKY+YN+
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121 RMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCSNAVMKKIRY 180
           RM EG+SVREHVL+MMVHFNVAEMNGAVIDE SQVSFILESLP SFLQF SNAVM KI Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181 NLTTLLNELQTFSLL 196
            LTTLLNELQTF  L
Sbjct: 181 TLTTLLNELQTFESL 195

[Close]

BLAST of Tan0003530 vs. TAIR 10
Match: AT4G00980.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 39/178 (21.91%), Postives = 76/178 (42.70%), Query Frame = 0


Query: 2   SSSIIALLKSVRLTGENFTTWKSNLNTILVVDDLQFVLSEECPQIPTRNAPQSIKEAYDR 61
           SS   +++K  R  G+++  W S +   L    L +VLSE CP I +   P++      R
Sbjct: 186 SSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITR 245

Query: 62  -------WIKANDKANVYILASVSEVLAKKH-EGMVSAREIMSSFAEMFGQSSGQIRHES 121
                  W++ +     +++ S+S+ L +++ +    A+E+      ++     + +   
Sbjct: 246 ADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQ 305

Query: 122 LKYVYNSRMKEGSSVREHVLDMMVHFNVAEMNGAVIDEQSQVSFILESLPMSFLQFCS 172
           ++     RM E   + E V       +     G  +DE   VS I+   P S+  FC+
Sbjct: 306 VRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCT 363

The following BLAST results are available for this feature:

BLAST of Tan0003530 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	9.3e-69	68.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	9.3e-69	68.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	9.3e-69	68.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0051952.1	9.3e-69	68.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	9.3e-69	68.21	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Tan0003530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	4.5e-69	68.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	4.5e-69	68.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	4.5e-69	68.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	4.5e-69	68.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	4.5e-69	68.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Tan0003530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00980.1	1.6e-05	21.91	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 62..190 e-value: 5.1E-15 score: 55.5
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 18..191
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 18..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003530.1	Tan0003530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding